BLASTX nr result
ID: Dioscorea21_contig00012145
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012145 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK40800.1| unknown [Medicago truncatula] 119 2e-25 ref|XP_002277738.1| PREDICTED: upstream activation factor subuni... 118 4e-25 gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense] 113 1e-23 ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-23 ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycin... 112 3e-23 >gb|AFK40800.1| unknown [Medicago truncatula] Length = 100 Score = 119 bits (299), Expect = 2e-25 Identities = 57/69 (82%), Positives = 62/69 (89%) Frame = +1 Query: 1 EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180 +FVGQSQ SRL F+RVWSYIK NNLQDP+NKN+VNCD+KLK ILLGKPQVDLAELP LI Sbjct: 32 DFVGQSQTSRLSCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKGILLGKPQVDLAELPALI 91 Query: 181 KLHFPKELK 207 KLHFPKE K Sbjct: 92 KLHFPKEPK 100 >ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis vinifera] gi|297737490|emb|CBI26691.3| unnamed protein product [Vitis vinifera] Length = 100 Score = 118 bits (296), Expect = 4e-25 Identities = 57/69 (82%), Positives = 63/69 (91%) Frame = +1 Query: 1 EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180 EFVGQSQISRL F+RVWSYIKANNLQDP+NKN+V CDDKL+ ILLGKP+V+LAELP LI Sbjct: 32 EFVGQSQISRLGCFMRVWSYIKANNLQDPNNKNVVICDDKLRSILLGKPRVELAELPALI 91 Query: 181 KLHFPKELK 207 KLHFPKE K Sbjct: 92 KLHFPKERK 100 >gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense] Length = 100 Score = 113 bits (283), Expect = 1e-23 Identities = 53/67 (79%), Positives = 59/67 (88%) Frame = +1 Query: 1 EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180 EF+GQSQ SRL F RVWSYIK NNLQDP+NKNLVNCD+KLK +LLGKPQV+L ELP LI Sbjct: 32 EFMGQSQTSRLGCFKRVWSYIKENNLQDPNNKNLVNCDEKLKSVLLGKPQVELTELPTLI 91 Query: 181 KLHFPKE 201 KLHFPK+ Sbjct: 92 KLHFPKQ 98 >ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|222869440|gb|EEF06571.1| predicted protein [Populus trichocarpa] Length = 100 Score = 112 bits (281), Expect = 2e-23 Identities = 53/69 (76%), Positives = 60/69 (86%) Frame = +1 Query: 1 EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180 +FVGQSQIS L F+RVWSYIK NNLQDP+NKN+VNCD+KLK ILLGK QV+L ELP LI Sbjct: 32 DFVGQSQISHLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSILLGKQQVELVELPALI 91 Query: 181 KLHFPKELK 207 KLHFPK+ K Sbjct: 92 KLHFPKQKK 100 >ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max] gi|255631726|gb|ACU16230.1| unknown [Glycine max] Length = 100 Score = 112 bits (280), Expect = 3e-23 Identities = 54/69 (78%), Positives = 60/69 (86%) Frame = +1 Query: 1 EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180 EFVGQSQISRL F +WSYIK NNLQD +NKN+VNCD+KLK ILLGKPQV+LAELP LI Sbjct: 32 EFVGQSQISRLGCFKCIWSYIKTNNLQDQNNKNVVNCDEKLKSILLGKPQVELAELPALI 91 Query: 181 KLHFPKELK 207 K+HFPKE K Sbjct: 92 KMHFPKEPK 100