BLASTX nr result

ID: Dioscorea21_contig00012145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012145
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40800.1| unknown [Medicago truncatula]                          119   2e-25
ref|XP_002277738.1| PREDICTED: upstream activation factor subuni...   118   4e-25
gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]     113   1e-23
ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycin...   112   3e-23

>gb|AFK40800.1| unknown [Medicago truncatula]
          Length = 100

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180
           +FVGQSQ SRL  F+RVWSYIK NNLQDP+NKN+VNCD+KLK ILLGKPQVDLAELP LI
Sbjct: 32  DFVGQSQTSRLSCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKGILLGKPQVDLAELPALI 91

Query: 181 KLHFPKELK 207
           KLHFPKE K
Sbjct: 92  KLHFPKEPK 100


>ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
           vinifera] gi|297737490|emb|CBI26691.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180
           EFVGQSQISRL  F+RVWSYIKANNLQDP+NKN+V CDDKL+ ILLGKP+V+LAELP LI
Sbjct: 32  EFVGQSQISRLGCFMRVWSYIKANNLQDPNNKNVVICDDKLRSILLGKPRVELAELPALI 91

Query: 181 KLHFPKELK 207
           KLHFPKE K
Sbjct: 92  KLHFPKERK 100


>gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 100

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +1

Query: 1   EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180
           EF+GQSQ SRL  F RVWSYIK NNLQDP+NKNLVNCD+KLK +LLGKPQV+L ELP LI
Sbjct: 32  EFMGQSQTSRLGCFKRVWSYIKENNLQDPNNKNLVNCDEKLKSVLLGKPQVELTELPTLI 91

Query: 181 KLHFPKE 201
           KLHFPK+
Sbjct: 92  KLHFPKQ 98


>ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|222869440|gb|EEF06571.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180
           +FVGQSQIS L  F+RVWSYIK NNLQDP+NKN+VNCD+KLK ILLGK QV+L ELP LI
Sbjct: 32  DFVGQSQISHLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSILLGKQQVELVELPALI 91

Query: 181 KLHFPKELK 207
           KLHFPK+ K
Sbjct: 92  KLHFPKQKK 100


>ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
           gi|255631726|gb|ACU16230.1| unknown [Glycine max]
          Length = 100

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/69 (78%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   EFVGQSQISRLDFFIRVWSYIKANNLQDPSNKNLVNCDDKLKRILLGKPQVDLAELPMLI 180
           EFVGQSQISRL  F  +WSYIK NNLQD +NKN+VNCD+KLK ILLGKPQV+LAELP LI
Sbjct: 32  EFVGQSQISRLGCFKCIWSYIKTNNLQDQNNKNVVNCDEKLKSILLGKPQVELAELPALI 91

Query: 181 KLHFPKELK 207
           K+HFPKE K
Sbjct: 92  KMHFPKEPK 100


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