BLASTX nr result

ID: Dioscorea21_contig00012129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012129
         (1956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   769   0.0  
ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|2...   759   0.0  
ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2...   759   0.0  
ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...   755   0.0  
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]   741   0.0  

>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
            gi|223544730|gb|EEF46246.1| polygalacturonase, putative
            [Ricinus communis]
          Length = 494

 Score =  769 bits (1985), Expect = 0.0
 Identities = 372/496 (75%), Positives = 423/496 (85%), Gaps = 2/496 (0%)
 Frame = +3

Query: 270  LMMEIFSPSGRLHTPGQ--RRWLPSAIPGHRPFLIGLWVLGFALVFLWQRGSVVGGGPRM 443
            +M+E  S  GRLH      +RW+P+    H+     LW+  FA VF+WQR +VVG G  +
Sbjct: 1    MMLETAS-LGRLHYQRLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQR-NVVGDGFAV 58

Query: 444  FSWXXXXXXXXXXXXXXFNLTDFGGVGDGVTLNTEAFERAVAFISKLRKKGGGQLNVQAG 623
            F                FNLTDFGGVGDGVTLNTEAFERAV  ISKL KKGGGQLNV  G
Sbjct: 59   FFKASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPG 118

Query: 624  VWLTAPFNLTSHMTLFLAEGAVILGIQDESYWPLMPPLRSYGHGREQKGPRYGSLIHGQN 803
             W+TAPFNLTSHMTLFLAE ++ILGI+DE YWPLMPPL SYG+GRE  GPRYGSLIHGQN
Sbjct: 119  RWVTAPFNLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQN 178

Query: 804  LKDVVITGHNGTIDGQGKSWWTKFRKKLLKHTRGPLVQIMWSRDIVISNITLQNSPFWTL 983
            LKDVVITGHNGTI+GQG++WW K+R+KLL HTRGPLVQIMWS DI+I+NITL++SPFWTL
Sbjct: 179  LKDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTL 238

Query: 984  HPYDCKNVTITNVTILAPVSGAPNTDGINPDSCRDMVIENCYISVGDDGVAIKSGWDQYG 1163
            HPYDCKNVTI NVTILAPV  APNTDGI+PDSC DMVIE+CYISVGDDG+AIKSGWDQYG
Sbjct: 239  HPYDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYG 298

Query: 1164 IAYGQPSMNILIRNLVVRSVVSAGVSIGSEMSGGVSNVLVENVHIWESRRGVRIKTAPGR 1343
            IAY +PS NILIRNLVVRS+VSAG+SIGSEMSGGVSN+ VEN+ +W SRR VRIKTAPGR
Sbjct: 299  IAYRRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGR 358

Query: 1344 GGYVRGISYRNITFDNVRVGIVIKTDYNEHPDEGFDPKATPTLKNISFTGIHGQEVRVPV 1523
            GGYVR I+YRN+TFDNVRVGIVIKTDYNEHPDEG+DPKA P L++ISFTG+HGQ VRVPV
Sbjct: 359  GGYVRHITYRNLTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPV 418

Query: 1524 RIQGSEEIPVKDITFQDMSVGISYKKKHIFQCSFVQGRVIGSVFPAPCENLDKYDERGQL 1703
            RI GSEEIPV+++TFQDMSVG++YKKKHIFQC+FVQGRVIG++FPAPCENLD+YDE+G+L
Sbjct: 419  RIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQGRL 478

Query: 1704 VMRSISQNNTDIDYDF 1751
            V RS+SQN TDIDYDF
Sbjct: 479  VKRSVSQNLTDIDYDF 494


>ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|222866162|gb|EEF03293.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score =  759 bits (1960), Expect = 0.0
 Identities = 362/477 (75%), Positives = 410/477 (85%)
 Frame = +3

Query: 321  RRWLPSAIPGHRPFLIGLWVLGFALVFLWQRGSVVGGGPRMFSWXXXXXXXXXXXXXXFN 500
            +R +P+ +  H+     LW+  FA VFLWQR +V GG      W              FN
Sbjct: 21   KRCVPAFLSSHKILFTLLWIAAFASVFLWQRNAVRGGFAAF--WHGPVRPIPKLRPVAFN 78

Query: 501  LTDFGGVGDGVTLNTEAFERAVAFISKLRKKGGGQLNVQAGVWLTAPFNLTSHMTLFLAE 680
            LTDFG VGDGVTLNTEAFERAV+ ISKL ++GGGQLNV  G WLTAPFNLTSHMTLFLAE
Sbjct: 79   LTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHMTLFLAE 138

Query: 681  GAVILGIQDESYWPLMPPLRSYGHGREQKGPRYGSLIHGQNLKDVVITGHNGTIDGQGKS 860
             AVILGIQDE+YWPLMPPL SYG+GRE  GPRYGSLIHGQNL+D+VITGHNGTIDGQG++
Sbjct: 139  DAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTIDGQGQT 198

Query: 861  WWTKFRKKLLKHTRGPLVQIMWSRDIVISNITLQNSPFWTLHPYDCKNVTITNVTILAPV 1040
            WW K+R+KLL HTRGPLVQIMWS DIV  NITL+NSPFWTLHPYDCKNVTI NVTILAP+
Sbjct: 199  WWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNVTILAPI 258

Query: 1041 SGAPNTDGINPDSCRDMVIENCYISVGDDGVAIKSGWDQYGIAYGQPSMNILIRNLVVRS 1220
              APNTDGI+PDSC DMVIE+CYISVGDD +AIKSGWDQYGIAYG+PS NILIRNLVVRS
Sbjct: 259  FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318

Query: 1221 VVSAGVSIGSEMSGGVSNVLVENVHIWESRRGVRIKTAPGRGGYVRGISYRNITFDNVRV 1400
            +VSAG+SIGSEMSGGVS+V VEN+ +W SRR VRIKTAPGRG YVR I+YRN+TFD+VRV
Sbjct: 319  MVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRV 378

Query: 1401 GIVIKTDYNEHPDEGFDPKATPTLKNISFTGIHGQEVRVPVRIQGSEEIPVKDITFQDMS 1580
            GIVIKTDYNEHPDEG+DPKA PTL++ISF+GIHGQ VRVPVRI GSEEIPV+++TFQDMS
Sbjct: 379  GIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNVTFQDMS 438

Query: 1581 VGISYKKKHIFQCSFVQGRVIGSVFPAPCENLDKYDERGQLVMRSISQNNTDIDYDF 1751
            VG++YKKKHIFQC+FVQGRVIG++FPAPCENLD+YDE+G+LV  S+SQN TDIDYDF
Sbjct: 439  VGLTYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQGKLVKLSVSQNITDIDYDF 495


>ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score =  759 bits (1960), Expect = 0.0
 Identities = 366/477 (76%), Positives = 409/477 (85%)
 Frame = +3

Query: 321  RRWLPSAIPGHRPFLIGLWVLGFALVFLWQRGSVVGGGPRMFSWXXXXXXXXXXXXXXFN 500
            +R LP+ +  H+     LW+  FA VFLW+R  V G G  +F W              FN
Sbjct: 21   KRCLPAFLSSHKTLFALLWIAAFASVFLWKRNPV-GAGLAVF-WRGPLRPMPQLRPVAFN 78

Query: 501  LTDFGGVGDGVTLNTEAFERAVAFISKLRKKGGGQLNVQAGVWLTAPFNLTSHMTLFLAE 680
            LTDFG VGDG T+NTEAFERAV+ ISKL K+GGGQLNV  G WLTAPFNLTSHMTLFLAE
Sbjct: 79   LTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHMTLFLAE 138

Query: 681  GAVILGIQDESYWPLMPPLRSYGHGREQKGPRYGSLIHGQNLKDVVITGHNGTIDGQGKS 860
            GAVILGIQDE YWPLMP L SYG+GRE  GPRYGSLIHGQNL+DVVITGHNGTIDGQG++
Sbjct: 139  GAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIDGQGQT 198

Query: 861  WWTKFRKKLLKHTRGPLVQIMWSRDIVISNITLQNSPFWTLHPYDCKNVTITNVTILAPV 1040
            WW K+R+KLL HTRGPLVQIMWS DIV +NITL++SPFWTLHPYDCKNVTI NVTILAP+
Sbjct: 199  WWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPI 258

Query: 1041 SGAPNTDGINPDSCRDMVIENCYISVGDDGVAIKSGWDQYGIAYGQPSMNILIRNLVVRS 1220
              APNTDGI+PDSC DMVIE+CYISVGDD +AIKSGWDQYGIAYG+PS NILIRNLVVRS
Sbjct: 259  FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318

Query: 1221 VVSAGVSIGSEMSGGVSNVLVENVHIWESRRGVRIKTAPGRGGYVRGISYRNITFDNVRV 1400
            +VSAG+SIGSEMSGGVSNV VENV +W SRR VRIKTAPGRGGYVR I+YRN+TFDNVRV
Sbjct: 319  MVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRV 378

Query: 1401 GIVIKTDYNEHPDEGFDPKATPTLKNISFTGIHGQEVRVPVRIQGSEEIPVKDITFQDMS 1580
            GIVIKTDYNEHPDEG+DPKA P L +ISFTGIHGQ VRVPVRI GS+EIPV+++TF DMS
Sbjct: 379  GIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNVTFWDMS 438

Query: 1581 VGISYKKKHIFQCSFVQGRVIGSVFPAPCENLDKYDERGQLVMRSISQNNTDIDYDF 1751
            VG++YKKKHIFQC+FVQGRVIG+VFPAPCENLD+YDE+G+LV RS+SQN TDIDYDF
Sbjct: 439  VGLTYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQGKLVKRSVSQNLTDIDYDF 495


>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
            gi|297738532|emb|CBI27777.3| unnamed protein product
            [Vitis vinifera]
          Length = 493

 Score =  755 bits (1950), Expect = 0.0
 Identities = 361/482 (74%), Positives = 411/482 (85%)
 Frame = +3

Query: 306  HTPGQRRWLPSAIPGHRPFLIGLWVLGFALVFLWQRGSVVGGGPRMFSWXXXXXXXXXXX 485
            H P  +RW+P+ +  HR     LW+  FA VF+WQR  V G    +              
Sbjct: 15   HRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEG---LLTFRRAPARPLPRLR 71

Query: 486  XXXFNLTDFGGVGDGVTLNTEAFERAVAFISKLRKKGGGQLNVQAGVWLTAPFNLTSHMT 665
               +NLTDFGGVGD VT+NTEAFERA++ ISKL KKGGGQLNV AG WLTAPFNLTSHMT
Sbjct: 72   PAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMT 131

Query: 666  LFLAEGAVILGIQDESYWPLMPPLRSYGHGREQKGPRYGSLIHGQNLKDVVITGHNGTID 845
            LFL + AVILGIQDE YWPLMPPL SYG+GRE +G RYGSLIHGQNLKDVVITGHNGTI+
Sbjct: 132  LFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGHNGTIN 191

Query: 846  GQGKSWWTKFRKKLLKHTRGPLVQIMWSRDIVISNITLQNSPFWTLHPYDCKNVTITNVT 1025
            GQG++WW K+R+KLL HTRGPLVQIMWS DIVISNITL++SPFWTLHPYDCKNVTI NVT
Sbjct: 192  GQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVT 251

Query: 1026 ILAPVSGAPNTDGINPDSCRDMVIENCYISVGDDGVAIKSGWDQYGIAYGQPSMNILIRN 1205
            ILAP+  APNTDGI+PDSC DMVIE+CYISVGDDG+AIKSGWDQYG+AYG+PS+NILIRN
Sbjct: 252  ILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRN 311

Query: 1206 LVVRSVVSAGVSIGSEMSGGVSNVLVENVHIWESRRGVRIKTAPGRGGYVRGISYRNITF 1385
            LV+RS+VSAGVSIGSEMSGGVSNV VEN+ +W SRR VRIKT+PGRGGYV+ I+YRN+TF
Sbjct: 312  LVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTF 371

Query: 1386 DNVRVGIVIKTDYNEHPDEGFDPKATPTLKNISFTGIHGQEVRVPVRIQGSEEIPVKDIT 1565
            DNVRVGIVIKTDYNEHPD+GFDPKA P L++ISFTG+HGQ VRVPVRI GSEEIPVK +T
Sbjct: 372  DNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVT 431

Query: 1566 FQDMSVGISYKKKHIFQCSFVQGRVIGSVFPAPCENLDKYDERGQLVMRSISQNNTDIDY 1745
            F+DMSVGI+YKKKHIFQC++V+GRVIG+VFPAPCENLD+YDE+ QL+  S SQN TDIDY
Sbjct: 432  FRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLIKHSKSQNVTDIDY 491

Query: 1746 DF 1751
            DF
Sbjct: 492  DF 493


>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
          Length = 509

 Score =  741 bits (1914), Expect = 0.0
 Identities = 359/498 (72%), Positives = 410/498 (82%), Gaps = 16/498 (3%)
 Frame = +3

Query: 306  HTPGQRRWLPSAIPGHRPFLIGLWVLGFALVFLWQRGSVVGGGPRMFSWXXXXXXXXXXX 485
            H P  +RW+P+ +  HR     LW+  FA VF+WQR  V G    +              
Sbjct: 15   HRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEG---LLTFRRAPARPLPRLR 71

Query: 486  XXXFNLTDFGGVGDGVTLNTEAFERAVAFISKLRKKGGGQLNVQAGVWLTAPFNLTSHMT 665
               +NLTDFGGVGD VT+NTEAFERA++ ISKL KKGGGQLNV AG WLTAPFNLTSHMT
Sbjct: 72   PAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHMT 131

Query: 666  LFLAEGAVILGIQDESYWPLMPPLRSYGHGREQKGPRYGSLIHGQNLKDVVITGHNGTID 845
            LFL + AVILGIQDE YWPLMPPL SYG+GRE +G RYGSLIHGQNLKDVV+TGHNGTI+
Sbjct: 132  LFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNGTIN 191

Query: 846  GQGKSWWTKFRKKLLKHTRGPLVQIMWSRDIVISNITLQNSPFWTLHPYDCKNVTITNVT 1025
            GQG++WW K+R+KLL HTRGPLVQIMWS DIVISNITL++SPFWTLHPYDCKNVTI NVT
Sbjct: 192  GQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVT 251

Query: 1026 ILAPVSGAPNTDGINP----------------DSCRDMVIENCYISVGDDGVAIKSGWDQ 1157
            ILAP+  APNTDGI+P                +SC DMVIE+CYISVGDDG+AIKSGWDQ
Sbjct: 252  ILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQ 311

Query: 1158 YGIAYGQPSMNILIRNLVVRSVVSAGVSIGSEMSGGVSNVLVENVHIWESRRGVRIKTAP 1337
            YG+AYG+PS+NILIRNLV+RS+VSAGVSIGSEMSGGVSNV VEN+ +W SRR VRIKT+P
Sbjct: 312  YGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSP 371

Query: 1338 GRGGYVRGISYRNITFDNVRVGIVIKTDYNEHPDEGFDPKATPTLKNISFTGIHGQEVRV 1517
            GRGGYV+ I+YRN+TFDNVRVGIVIKTDYNEHPD+GFDPKA P L++ISFTG+HGQ VRV
Sbjct: 372  GRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRV 431

Query: 1518 PVRIQGSEEIPVKDITFQDMSVGISYKKKHIFQCSFVQGRVIGSVFPAPCENLDKYDERG 1697
            PVRI GSEEIPVK +TF+DMSVGI+YKKKHIFQC++V+GRVIG+VFPAPCENLD+YDE+ 
Sbjct: 432  PVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQE 491

Query: 1698 QLVMRSISQNNTDIDYDF 1751
            QL   S SQN TDIDYDF
Sbjct: 492  QLXKHSXSQNVTDIDYDF 509


Top