BLASTX nr result

ID: Dioscorea21_contig00012117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012117
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33681.1| unnamed protein product [Thellungiella halophila]      88   6e-16
ref|NP_188478.1| aspartyl protease family protein [Arabidopsis t...    86   4e-15
gb|AAL87345.1| putative chloroplast nucleoid DNA-binding protein...    86   4e-15
ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor,...    84   9e-15
ref|XP_002457394.1| hypothetical protein SORBIDRAFT_03g006630 [S...    82   5e-14

>dbj|BAJ33681.1| unnamed protein product [Thellungiella halophila]
          Length = 502

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/122 (45%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
 Frame = -2

Query: 352 LDVSASLDLITRALSFDPSRVQQT-----LDPEKTKLHSGNSSDLSVTLHSRDFLSTTPH 188
           LDV +SL      LS DP+R   T       PE   +   +SS LS+ LHSRD L  + H
Sbjct: 38  LDVVSSLQQTQHILSVDPTRSSLTARIPEFKPESDPVFLNSSSPLSLELHSRDTLVASQH 97

Query: 187 KNYKTLTLARLLRDSARVTAITARAALAVNGISRSDLKPLLDPAMTTTAATGDDLQGPIV 8
           K+YK+L L+RL RDS+RV  I A+   AV GI RSDLKP+    +  T    +DL  P+V
Sbjct: 98  KDYKSLVLSRLERDSSRVAGIAAKIRFAVEGIDRSDLKPV---DIDETRFQPEDLTTPVV 154

Query: 7   SG 2
           SG
Sbjct: 155 SG 156


>ref|NP_188478.1| aspartyl protease family protein [Arabidopsis thaliana]
           gi|75273882|sp|Q9LS40.1|ASPG1_ARATH RecName:
           Full=Protein ASPARTIC PROTEASE IN GUARD CELL 1;
           Short=AtASPG1; Flags: Precursor
           gi|11994113|dbj|BAB01116.1| CND41, chloroplast nucleoid
           DNA binding protein-like [Arabidopsis thaliana]
           gi|23297732|gb|AAN13013.1| putative chloroplast nucleoid
           DNA-binding protein [Arabidopsis thaliana]
           gi|332642583|gb|AEE76104.1| aspartyl protease family
           protein [Arabidopsis thaliana]
          Length = 500

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 LDVSASLDLITRALSFDPSRVQ-QTLDPEKTK--LHSGNSSDLSVTLHSRDFLSTTPHKN 182
           LDV +SL      LS DP+R    T  PE     +   +SS LS+ LHSRD    + HK+
Sbjct: 38  LDVVSSLQQTQTILSLDPTRSSLTTTKPESLSDPVFFNSSSPLSLELHSRDTFVASQHKD 97

Query: 181 YKTLTLARLLRDSARVTAITARAALAVNGISRSDLKPLLDPAMTTTAATGDDLQGPIVSG 2
           YK+LTL+RL RDS+RV  I A+   AV G+ RSDLKP+ +     T    +DL  P+VSG
Sbjct: 98  YKSLTLSRLERDSSRVAGIVAKIRFAVEGVDRSDLKPVYN---EDTRYQTEDLTTPVVSG 154


>gb|AAL87345.1| putative chloroplast nucleoid DNA-binding protein [Arabidopsis
           thaliana]
          Length = 500

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 LDVSASLDLITRALSFDPSRVQ-QTLDPEKTK--LHSGNSSDLSVTLHSRDFLSTTPHKN 182
           LDV +SL      LS DP+R    T  PE     +   +SS LS+ LHSRD    + HK+
Sbjct: 38  LDVVSSLQQTQTILSLDPTRSSLTTTKPESLSDPVFFNSSSPLSLELHSRDTFVASQHKD 97

Query: 181 YKTLTLARLLRDSARVTAITARAALAVNGISRSDLKPLLDPAMTTTAATGDDLQGPIVSG 2
           YK+LTL+RL RDS+RV  I A+   AV G+ RSDLKP+ +     T    +DL  P+VSG
Sbjct: 98  YKSLTLSRLERDSSRVAGIVAKIRFAVEGVDRSDLKPVYN---EDTRYQTEDLTTPVVSG 154


>ref|XP_002511962.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223549142|gb|EEF50631.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 495

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 LDVSASLDLITRALSFDPSRVQQTLDPEKTK---LHSGNSSDLSVTLHSRDFLSTTPHKN 182
           LDVS+SL      LSF+P + Q  L  ++ +   + S  +S  S++L+ RD +  TPHK+
Sbjct: 39  LDVSSSLQQALNILSFNPQQ-QTALSQQQQQTIAIPSFLNSSFSLSLNPRDTIHKTPHKD 97

Query: 181 YKTLTLARLLRDSARVTAITARAALAVNGISRSDLKPLLDPAMTTTAATGDDLQGPIVSG 2
           YK L L+RL RDS+RV AIT R  L +NG+S+SDLKPL       T     DL  P+ SG
Sbjct: 98  YKALVLSRLHRDSSRVQAITTRLQLILNGVSKSDLKPL------QTEIQPQDLSTPVSSG 151


>ref|XP_002457394.1| hypothetical protein SORBIDRAFT_03g006630 [Sorghum bicolor]
           gi|241929369|gb|EES02514.1| hypothetical protein
           SORBIDRAFT_03g006630 [Sorghum bicolor]
          Length = 509

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
 Frame = -2

Query: 352 LDVSASLDLITRALSFDPS----RVQQTLDPEKTKLHSGNSSDLSVTLHSRDFLSTTP-- 191
           LDV+ASL L   ALS D +    +     + +++   SG    L++ LHSRDFL      
Sbjct: 40  LDVAASLSLARAALSTDAAVSLHQSAAAAEAKRSSRESGGGGSLTLRLHSRDFLPEAQQR 99

Query: 190 HKNYKTLTLARLLRDSARVTAITARAALAVNGISRSDLKPLLDPAMTTTAATGDDLQGPI 11
           H  Y++L  +RL RDSAR  A++ARA LA +G++R DL+P  + A+   A+    +QGP+
Sbjct: 100 HATYRSLVQSRLRRDSARAAALSARATLAADGVTRQDLRPANESAV-FGASLAAAIQGPV 158

Query: 10  VSG 2
           VSG
Sbjct: 159 VSG 161


Top