BLASTX nr result

ID: Dioscorea21_contig00012098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012098
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG32267.1| gibberellin 3-oxidase [Allium fistulosum]             103   2e-20
gb|AEW67998.1| gibberellin 3 oxidase 1 [Castanea mollissima]           98   6e-19
gb|AAM12873.1|AF494090_1 gibberellin 3-oxidase 2 [Nicotiana sylv...    98   6e-19
dbj|BAA89316.1| gibberellin 3beta-hydroxylase [Nicotiana tabacum]      96   2e-18
ref|XP_002299619.1| gibberellin 3-oxidase [Populus trichocarpa] ...    95   5e-18

>dbj|BAG32267.1| gibberellin 3-oxidase [Allium fistulosum]
          Length = 365

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/94 (56%), Positives = 63/94 (67%)
 Frame = +2

Query: 89  HFEFNSVHEVPDSHAWPSLHDYPSTEPLGHDSIPIIDLNKSSSDTIKQIKQACERWGLFR 268
           HF+  S HEVPDSH WP++   P   P  ++SIP+IDL  SS D I  I  ACE WG+F+
Sbjct: 21  HFDLGSAHEVPDSHTWPTIQPNPPNGP--NESIPVIDL--SSPDVISLIGHACESWGVFQ 76

Query: 269 VTGHGVPGDLLDQLELQTCRLFSLPTRQKLKAAR 370
           V  HGV  +LL  LE Q  RLFSLPT+QKLKA R
Sbjct: 77  VISHGVDLNLLHNLESQARRLFSLPTQQKLKAGR 110


>gb|AEW67998.1| gibberellin 3 oxidase 1 [Castanea mollissima]
          Length = 368

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/94 (48%), Positives = 65/94 (69%)
 Frame = +2

Query: 89  HFEFNSVHEVPDSHAWPSLHDYPSTEPLGHDSIPIIDLNKSSSDTIKQIKQACERWGLFR 268
           H +FNS+ E+PDS+ W  L +YPS E    +S+P+IDL   ++ T+  +  AC+ WG+F+
Sbjct: 20  HQDFNSLQELPDSYKWTQLDEYPSCESFSSESVPLIDLTDPNALTL--VGHACKTWGVFQ 77

Query: 269 VTGHGVPGDLLDQLELQTCRLFSLPTRQKLKAAR 370
           VT HG+P  LLD +E  +  LFSLP +QKLKAAR
Sbjct: 78  VTNHGIPTKLLDDIESVSRCLFSLPQQQKLKAAR 111


>gb|AAM12873.1|AF494090_1 gibberellin 3-oxidase 2 [Nicotiana sylvestris]
          Length = 370

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
 Frame = +2

Query: 89  HFEFNSVHEVPDSHAWPSLHDYPSTEPLGHDSIPIIDLNKSSSDTI---KQIKQACERWG 259
           H + NS+ E+P+SHAW S +DYPS      +SIP+IDLN ++ + I   + I QAC++WG
Sbjct: 16  HLDLNSIKELPESHAWTSSNDYPSENSCNFESIPVIDLNNNNHNNINVLEHIGQACKKWG 75

Query: 260 LFRVTGHGVPGDLLDQLELQTCRLFSLPTRQKLKAAR 370
            F++  H +   LL  +EL    LFSLP +QKLKAAR
Sbjct: 76  AFQIINHNISERLLQDIELAGKNLFSLPMQQKLKAAR 112


>dbj|BAA89316.1| gibberellin 3beta-hydroxylase [Nicotiana tabacum]
          Length = 371

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
 Frame = +2

Query: 89  HFEFNSVHEVPDSHAWPSLHDYPSTEPLGHDSIPIIDL----NKSSSDTIKQIKQACERW 256
           H + NS+ E+P+SHAW S +DYPS      +SIP+IDL    N ++ + ++ I QAC++W
Sbjct: 16  HLDLNSIKELPESHAWTSSNDYPSENSCNFESIPVIDLDNYINNNNINVLEHIGQACKKW 75

Query: 257 GLFRVTGHGVPGDLLDQLELQTCRLFSLPTRQKLKAAR 370
           G F++  H +   LL  +EL    LFSLP +QKLKAAR
Sbjct: 76  GAFQIINHNISERLLQDIELAGKSLFSLPMQQKLKAAR 113


>ref|XP_002299619.1| gibberellin 3-oxidase [Populus trichocarpa]
           gi|222846877|gb|EEE84424.1| gibberellin 3-oxidase
           [Populus trichocarpa]
          Length = 372

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
 Frame = +2

Query: 89  HFEFNSVHEVPDSHAWPSLHD--YPSTEPLGHDSIPIIDLNKSSSDTIKQIKQACERWGL 262
           H +F S+ E+PDSH W  + D  +P  +PL  +S+P+IDL  S  + ++ I  AC+ WG+
Sbjct: 22  HIDFTSLQEIPDSHKWTQIDDEQHPLVDPLNTESVPVIDL--SDPNVLQNIGHACKTWGV 79

Query: 263 FRVTGHGVPGDLLDQLELQTCRLFSLPTRQKLKAAR 370
            +VT HG+P  LL+ +E  +  LFSLP +QKLKAAR
Sbjct: 80  LQVTNHGIPTSLLENIESASRSLFSLPIQQKLKAAR 115


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