BLASTX nr result

ID: Dioscorea21_contig00012092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012092
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group] g...   427   e-117
gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, ...   427   e-117
gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indi...   420   e-115
ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [...   419   e-114
ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group] g...   418   e-114

>ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
            gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza
            sativa Japonica Group]
          Length = 424

 Score =  427 bits (1097), Expect = e-117
 Identities = 209/322 (64%), Positives = 252/322 (78%), Gaps = 1/322 (0%)
 Frame = -3

Query: 1705 RSLINGNNLTDVVITGDYGTIDGQGSVWWDWFHSHSLNYSRPNLVEFVSSTDIIISNLTF 1526
            RSLING+N+TDVVITG+ G IDGQG  WW+WF S+ LNYSRP+LVEFV S DI+ISNLT 
Sbjct: 105  RSLINGHNVTDVVITGNNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTL 164

Query: 1525 LNSPAWGIYPVYCSNVQIQNVTIYSSPDSPFTNGIVPDSCSNTCIVYCSISVGHDAISLK 1346
            LNSPAWGI+PV+CSNV + +VTI +S D+P T+GIVPDSCSN CI   SISV HDAISLK
Sbjct: 165  LNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLK 224

Query: 1345 SGWDEYGISYGKPASDIHIHEVTLQTSHGSALAFGSEMSGGISEIHVDHLHIHDSATAIQ 1166
            SGWD YGI+ G+PASDIHI  V LQ S G+ALAFGSEMSGGIS+IHVDHL+IH S+  I 
Sbjct: 225  SGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGIL 284

Query: 1165 FKTTAGRGGFMEHILISDVEMENVETAIHFTGHSDNHPDEDYDPNALPLINAITIKNMIG 986
            FKT  GRGG++  ++ISDV+ME+V  AI FTG    HPD  +DP+ALP+IN IT+KNM+G
Sbjct: 285  FKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVG 344

Query: 985  KNISTAGILTGIKGDPFTALCFSNISLSVT-SDPETSWDCSDVSGFSQSVVPQPCSDLSQ 809
             NIS AG+L+GI GDPFT +C SNIS S+  S   +SW CS++SG+S+ V P+PC DL  
Sbjct: 345  TNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHH 404

Query: 808  LTYSNSSFQCFSLLDQNGYALA 743
             + SNSS  CFSLL  +  A A
Sbjct: 405  -SSSNSSI-CFSLLTYHALAAA 424


>gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
            sativa Japonica Group] gi|222617271|gb|EEE53403.1|
            hypothetical protein OsJ_36464 [Oryza sativa Japonica
            Group]
          Length = 457

 Score =  427 bits (1097), Expect = e-117
 Identities = 209/322 (64%), Positives = 252/322 (78%), Gaps = 1/322 (0%)
 Frame = -3

Query: 1705 RSLINGNNLTDVVITGDYGTIDGQGSVWWDWFHSHSLNYSRPNLVEFVSSTDIIISNLTF 1526
            RSLING+N+TDVVITG+ G IDGQG  WW+WF S+ LNYSRP+LVEFV S DI+ISNLT 
Sbjct: 138  RSLINGHNVTDVVITGNNGIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTL 197

Query: 1525 LNSPAWGIYPVYCSNVQIQNVTIYSSPDSPFTNGIVPDSCSNTCIVYCSISVGHDAISLK 1346
            LNSPAWGI+PV+CSNV + +VTI +S D+P T+GIVPDSCSN CI   SISV HDAISLK
Sbjct: 198  LNSPAWGIHPVFCSNVMVHDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLK 257

Query: 1345 SGWDEYGISYGKPASDIHIHEVTLQTSHGSALAFGSEMSGGISEIHVDHLHIHDSATAIQ 1166
            SGWD YGI+ G+PASDIHI  V LQ S G+ALAFGSEMSGGIS+IHVDHL+IH S+  I 
Sbjct: 258  SGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGIL 317

Query: 1165 FKTTAGRGGFMEHILISDVEMENVETAIHFTGHSDNHPDEDYDPNALPLINAITIKNMIG 986
            FKT  GRGG++  ++ISDV+ME+V  AI FTG    HPD  +DP+ALP+IN IT+KNM+G
Sbjct: 318  FKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVG 377

Query: 985  KNISTAGILTGIKGDPFTALCFSNISLSVT-SDPETSWDCSDVSGFSQSVVPQPCSDLSQ 809
             NIS AG+L+GI GDPFT +C SNIS S+  S   +SW CS++SG+S+ V P+PC DL  
Sbjct: 378  TNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSWSCSNISGYSELVFPEPCPDLHH 437

Query: 808  LTYSNSSFQCFSLLDQNGYALA 743
             + SNSS  CFSLL  +  A A
Sbjct: 438  -SSSNSSI-CFSLLTYHALAAA 457


>gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
          Length = 449

 Score =  420 bits (1079), Expect = e-115
 Identities = 199/321 (61%), Positives = 255/321 (79%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1705 RSLINGNNLTDVVITGDYGTIDGQGSVWWDWFHSHSLNYSRPNLVEFVSSTDIIISNLTF 1526
            RSLING NL+DVVITG+ G IDGQGSVWWDW HSH LN+SRP++VEF+ S +++ISNLTF
Sbjct: 130  RSLINGYNLSDVVITGNNGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTF 189

Query: 1525 LNSPAWGIYPVYCSNVQIQNVTIYSSPDSPFTNGIVPDSCSNTCIVYCSISVGHDAISLK 1346
            LNSPAW I+PVYCSNV++ NVTI +S D+P T+GIVPDSCSN CI   SISVGHDAISLK
Sbjct: 190  LNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLK 249

Query: 1345 SGWDEYGISYGKPASDIHIHEVTLQTSHGSALAFGSEMSGGISEIHVDHLHIHDSATAIQ 1166
            SGWD YGIS+G+P SDIHI  V LQ S G+ALA GSEMSGGIS+IHVDH+ I  S+  I 
Sbjct: 250  SGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGIS 309

Query: 1165 FKTTAGRGGFMEHILISDVEMENVETAIHFTGHSDNHPDEDYDPNALPLINAITIKNMIG 986
            F+TT GRGG++  ++++DV M++V  AI FTG+  +HPD+ +DP+ LP+I+ IT+KNM G
Sbjct: 310  FRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEG 369

Query: 985  KNISTAGILTGIKGDPFTALCFSNISLSVT-SDPETSWDCSDVSGFSQSVVPQPCSDLSQ 809
             NIS AG+L+GI+GDPF+A+C SN++ S+  S P ++W CS+V G+S+ V P+PCS+L  
Sbjct: 370  TNISVAGVLSGIEGDPFSAICLSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHD 429

Query: 808  LTYSNSSFQCFSLLDQNGYAL 746
             T +NSS  CFSL   +  A+
Sbjct: 430  -TSTNSSI-CFSLSSYSALAV 448


>ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium distachyon]
          Length = 457

 Score =  419 bits (1076), Expect = e-114
 Identities = 200/321 (62%), Positives = 255/321 (79%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1702 SLINGNNLTDVVITGDYGTIDGQGSVWWDWFHSHSLNYSRPNLVEFVSSTDIIISNLTFL 1523
            SLING N+TDVVITG+ G I+GQGS+WWDW HSH LN+SRP+LVEF+ S +I+ISNLTFL
Sbjct: 139  SLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNHSRPHLVEFLHSEEIVISNLTFL 198

Query: 1522 NSPAWGIYPVYCSNVQIQNVTIYSSPDSPFTNGIVPDSCSNTCIVYCSISVGHDAISLKS 1343
            NSPAW I+PVYCS V++ NVTI +S D+P T+GIVPDS SN  I   +ISV HDAIS+KS
Sbjct: 199  NSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNVVIEDSTISVSHDAISIKS 258

Query: 1342 GWDEYGISYGKPASDIHIHEVTLQTSHGSALAFGSEMSGGISEIHVDHLHIHDSATAIQF 1163
            GWD+YGIS GKPASDIHI  + LQ S G+ALAFGSEMSGGIS+IH D++ IH S   I F
Sbjct: 259  GWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGISDIHADNIQIHGSNKGISF 318

Query: 1162 KTTAGRGGFMEHILISDVEMENVETAIHFTGHSDNHPDEDYDPNALPLINAITIKNMIGK 983
            KTT GRGG+++ ++ISDV+M++V  AI FTG+  +HPDED+DP+ LP+I  IT+K+M+G 
Sbjct: 319  KTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFDPSQLPVIGQITLKDMVGT 378

Query: 982  NISTAGILTGIKGDPFTALCFSNIS-LSVTSDPETSWDCSDVSGFSQSVVPQPCSDLSQL 806
            NIS AG+L+GI GDPFTA+C SN++ L   S   +SW CS+VSG+S+SV P+PCS+L   
Sbjct: 379  NISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNVSGYSESVFPEPCSELH-- 436

Query: 805  TYSNSSFQCFSLLDQNGYALA 743
            T S++S  CFSL+  +  A+A
Sbjct: 437  TPSSNSSMCFSLVSYSALAVA 457


>ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group] gi|77552386|gb|ABA95183.1|
            glycoside hydrolase family 28 protein, putative,
            expressed [Oryza sativa Japonica Group]
            gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa
            Japonica Group] gi|222616379|gb|EEE52511.1| hypothetical
            protein OsJ_34717 [Oryza sativa Japonica Group]
          Length = 449

 Score =  418 bits (1075), Expect = e-114
 Identities = 198/321 (61%), Positives = 254/321 (79%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1705 RSLINGNNLTDVVITGDYGTIDGQGSVWWDWFHSHSLNYSRPNLVEFVSSTDIIISNLTF 1526
            RSLING NL+DVVITG+ G IDGQGSVWWDW HSH LN+SRP++VEF+ S +++ISNLTF
Sbjct: 130  RSLINGYNLSDVVITGNNGVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTF 189

Query: 1525 LNSPAWGIYPVYCSNVQIQNVTIYSSPDSPFTNGIVPDSCSNTCIVYCSISVGHDAISLK 1346
            LNSPAW I+PVYCSNV++ NVTI +S D+P T+GIVPDSCSN CI   SISVGHDAISLK
Sbjct: 190  LNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLK 249

Query: 1345 SGWDEYGISYGKPASDIHIHEVTLQTSHGSALAFGSEMSGGISEIHVDHLHIHDSATAIQ 1166
            SGWD YGIS+G+P SDIHI  V LQ S G+ALA GSEMSGGIS+IHVDH+ I  S+  I 
Sbjct: 250  SGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGIS 309

Query: 1165 FKTTAGRGGFMEHILISDVEMENVETAIHFTGHSDNHPDEDYDPNALPLINAITIKNMIG 986
            F+TT GRGG++  ++++DV M++V  AI FTG+  +HPD+ +DP+ LP+I+ IT+KNM G
Sbjct: 310  FRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEG 369

Query: 985  KNISTAGILTGIKGDPFTALCFSNISLSVTS-DPETSWDCSDVSGFSQSVVPQPCSDLSQ 809
             NIS AG+L+GI+GDPF+A+C SN++ S+    P ++W CS+V G+S+ V P+PCS+L  
Sbjct: 370  TNISVAGVLSGIEGDPFSAICLSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHD 429

Query: 808  LTYSNSSFQCFSLLDQNGYAL 746
             T +NSS  CFSL   +  A+
Sbjct: 430  -TSTNSSI-CFSLSSYSALAV 448


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