BLASTX nr result

ID: Dioscorea21_contig00012071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012071
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group] g...   280   2e-73
emb|CBI30112.3| unnamed protein product [Vitis vinifera]              277   1e-72
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   277   1e-72
ref|XP_002531546.1| Nucleolar essential protein, putative [Ricin...   276   3e-72
ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [S...   276   3e-72

>ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group]
           gi|47847950|dbj|BAD21740.1| putative nucleolar essential
           protein [Oryza sativa Japonica Group]
           gi|47847958|dbj|BAD21747.1| putative nucleolar essential
           protein [Oryza sativa Japonica Group]
           gi|113536121|dbj|BAF08504.1| Os02g0290400 [Oryza sativa
           Japonica Group] gi|215678829|dbj|BAG95266.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218190517|gb|EEC72944.1| hypothetical protein
           OsI_06808 [Oryza sativa Indica Group]
           gi|222622635|gb|EEE56767.1| hypothetical protein
           OsJ_06314 [Oryza sativa Japonica Group]
          Length = 284

 Score =  280 bits (715), Expect = 2e-73
 Identities = 141/194 (72%), Positives = 160/194 (82%)
 Frame = +1

Query: 88  VLDELPGIPSVAPVEKSKQPKVIFILEKASLEIGKVGKNFQLLNSDDHGNFLRRQNLNPA 267
           V D LP +P   PV+  ++P  IF+LE+A LE+GKVGK  Q+LNSDDH N+LR+QN NPA
Sbjct: 60  VADGLPVVPR--PVDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPA 117

Query: 268 DYRPDIVHHALLAILDSPLTKAGRLQALYVRTEKGVLFEVKPNVRMPRTIKRFSGLMLQL 447
           DYRPDI+H ALLAI DSPLTKAGRLQA+YVRTEKGVLFE+KP VRMPRT KRF GLM QL
Sbjct: 118 DYRPDIIHQALLAIFDSPLTKAGRLQAVYVRTEKGVLFEIKPYVRMPRTFKRFCGLMSQL 177

Query: 448 LQKLSITTTGSHDKLLNVIKNPVSRYLPVNSRIIGLSYSSEKLVQLKDYVAAASDDATLV 627
           LQKLSIT  G  +KLLNVIKNPV+RYLPV ++ IGLSYS+EK V L DYVA +SDD  LV
Sbjct: 178 LQKLSITAVGKREKLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLV 237

Query: 628 FVVGAMAHGKISNE 669
           FVVGAMAHGKI NE
Sbjct: 238 FVVGAMAHGKIDNE 251


>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  277 bits (709), Expect = 1e-72
 Identities = 140/198 (70%), Positives = 164/198 (82%)
 Frame = +1

Query: 82  DAVLDELPGIPSVAPVEKSKQPKVIFILEKASLEIGKVGKNFQLLNSDDHGNFLRRQNLN 261
           + +  ELPGIP V P + + +  V FILE+A LE+ KVGK++QLL+S+DH NFLR+ N N
Sbjct: 92  EEITHELPGIPLV-PFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKN 150

Query: 262 PADYRPDIVHHALLAILDSPLTKAGRLQALYVRTEKGVLFEVKPNVRMPRTIKRFSGLML 441
           PADYRPDI+H ALL ILDSPL KAGRL+A+YVRTEKGVLFEVKP+VR+PRT KRFSG+ML
Sbjct: 151 PADYRPDILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIML 210

Query: 442 QLLQKLSITTTGSHDKLLNVIKNPVSRYLPVNSRIIGLSYSSEKLVQLKDYVAAASDDAT 621
           QLLQKLSIT  G  +KLL VIKNPV++YLPVNSR IG SYSSEK   ++DYVAA SDD  
Sbjct: 211 QLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVD 270

Query: 622 LVFVVGAMAHGKISNENT 675
           LVFVVGAMAHGKISN+ T
Sbjct: 271 LVFVVGAMAHGKISNDYT 288


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  277 bits (709), Expect = 1e-72
 Identities = 140/198 (70%), Positives = 164/198 (82%)
 Frame = +1

Query: 82  DAVLDELPGIPSVAPVEKSKQPKVIFILEKASLEIGKVGKNFQLLNSDDHGNFLRRQNLN 261
           + +  ELPGIP V P + + +  V FILE+A LE+ KVGK++QLL+S+DH NFLR+ N N
Sbjct: 44  EEITHELPGIPLV-PFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKN 102

Query: 262 PADYRPDIVHHALLAILDSPLTKAGRLQALYVRTEKGVLFEVKPNVRMPRTIKRFSGLML 441
           PADYRPDI+H ALL ILDSPL KAGRL+A+YVRTEKGVLFEVKP+VR+PRT KRFSG+ML
Sbjct: 103 PADYRPDILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIML 162

Query: 442 QLLQKLSITTTGSHDKLLNVIKNPVSRYLPVNSRIIGLSYSSEKLVQLKDYVAAASDDAT 621
           QLLQKLSIT  G  +KLL VIKNPV++YLPVNSR IG SYSSEK   ++DYVAA SDD  
Sbjct: 163 QLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVD 222

Query: 622 LVFVVGAMAHGKISNENT 675
           LVFVVGAMAHGKISN+ T
Sbjct: 223 LVFVVGAMAHGKISNDYT 240


>ref|XP_002531546.1| Nucleolar essential protein, putative [Ricinus communis]
           gi|223528837|gb|EEF30840.1| Nucleolar essential protein,
           putative [Ricinus communis]
          Length = 294

 Score =  276 bits (706), Expect = 3e-72
 Identities = 137/190 (72%), Positives = 161/190 (84%)
 Frame = +1

Query: 91  LDELPGIPSVAPVEKSKQPKVIFILEKASLEIGKVGKNFQLLNSDDHGNFLRRQNLNPAD 270
           + E+ GIP +    K+K+P VIF+LEKASLE+ KVGK +Q+LNSDDH NFLR+ N NPAD
Sbjct: 69  VQEMEGIPIMPSDSKTKKPGVIFVLEKASLEVAKVGKTYQILNSDDHANFLRKNNKNPAD 128

Query: 271 YRPDIVHHALLAILDSPLTKAGRLQALYVRTEKGVLFEVKPNVRMPRTIKRFSGLMLQLL 450
           YRPDIV+ ALL+ILDSPL KAGRLQA+YV+TEKGVLFEVKP VR+PRT KRF+G+MLQLL
Sbjct: 129 YRPDIVYQALLSILDSPLNKAGRLQAVYVKTEKGVLFEVKPYVRIPRTYKRFTGIMLQLL 188

Query: 451 QKLSITTTGSHDKLLNVIKNPVSRYLPVNSRIIGLSYSSEKLVQLKDYVAAASDDATLVF 630
           QKLSIT  G  +KLL VIKNPV++YLPVNSR IG SYSS+KLV++ +YVAA  DD  LVF
Sbjct: 189 QKLSITAAGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSDKLVKMSNYVAAVDDDVGLVF 248

Query: 631 VVGAMAHGKI 660
           VVGAMAHGKI
Sbjct: 249 VVGAMAHGKI 258


>ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [Sorghum bicolor]
           gi|241934376|gb|EES07521.1| hypothetical protein
           SORBIDRAFT_04g033060 [Sorghum bicolor]
          Length = 280

 Score =  276 bits (705), Expect = 3e-72
 Identities = 140/197 (71%), Positives = 160/197 (81%)
 Frame = +1

Query: 85  AVLDELPGIPSVAPVEKSKQPKVIFILEKASLEIGKVGKNFQLLNSDDHGNFLRRQNLNP 264
           A  D LP IP    V+  ++P  IF+LE+A LE+GKVGK  Q+LNSDDH N+LR+QN NP
Sbjct: 55  AAADGLPIIPRT--VDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNP 112

Query: 265 ADYRPDIVHHALLAILDSPLTKAGRLQALYVRTEKGVLFEVKPNVRMPRTIKRFSGLMLQ 444
           ADYRPDI+H ALLAI DSPLTKAGRLQA+YVRTEKGVLFE+KP+VRMPRT KRF GLM Q
Sbjct: 113 ADYRPDIIHQALLAIFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQ 172

Query: 445 LLQKLSITTTGSHDKLLNVIKNPVSRYLPVNSRIIGLSYSSEKLVQLKDYVAAASDDATL 624
           LLQKLSIT  G  +KLLNV+KNPV+RYLPV +R IGLS+S+EK V L DYVA +SDD  L
Sbjct: 173 LLQKLSITAVGKREKLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSSDDEPL 232

Query: 625 VFVVGAMAHGKISNENT 675
           VFVVGAMAHGKI  E T
Sbjct: 233 VFVVGAMAHGKIDKEYT 249


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