BLASTX nr result

ID: Dioscorea21_contig00012064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012064
         (1674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Viti...   199   1e-48
ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|XP_002522566.1| DNA binding protein, putative [Ricinus commu...   184   6e-44
emb|CBI21967.3| unnamed protein product [Vitis vinifera]              181   4e-43
ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Viti...   175   3e-41

>ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 259

 Score =  199 bits (507), Expect = 1e-48
 Identities = 117/241 (48%), Positives = 157/241 (65%), Gaps = 15/241 (6%)
 Frame = +2

Query: 458  FGGFCDGLE------------LPASSSLVMDGDRGELVRAGRGRSGGCGDLNDRAAMALK 601
            F GF DG                +SS LV+D +RGELVRA   R G      ++A +ALK
Sbjct: 8    FPGFSDGFSENSGYGAIIRGGSSSSSLLVLDSERGELVRAP-ARLGPNEVKAEKAMVALK 66

Query: 602  SHSEAXXXXXXXINAHLTTLRGLIPSSDKLDKASLLAEVISHVKKLKSNATEISKGCIVP 781
            +HSEA       INAHL TLRG+IP + K+DKASLL EV+SH+K+LK +A EISKG +VP
Sbjct: 67   NHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKGFLVP 126

Query: 782  SEVDEARAEAESIGMNSVAFMIKASLSCDDRPEILADLKQTLQTFKLKTLGAEISTLSGR 961
             ++DE R E +  G++   + IKASL CD +P +L+DL++ L T  LKT+ AEI+TL GR
Sbjct: 127  MDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGR 186

Query: 962  MKVVFLL-AC-EGNISETEGHLL-TTSIQQALRSVLDRATSPQDFLLRASYPNKRRRIPL 1132
            MK VF++  C +GN+ +TE   L   S+ QALRSVLD+  + QDF  R++  NKR+RI +
Sbjct: 187  MKNVFVMTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRISI 246

Query: 1133 F 1135
            F
Sbjct: 247  F 247


>ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|222862451|gb|EEE99957.1|
            predicted protein [Populus trichocarpa]
          Length = 267

 Score =  186 bits (473), Expect = 1e-44
 Identities = 104/219 (47%), Positives = 149/219 (68%), Gaps = 3/219 (1%)
 Frame = +2

Query: 491  ASSSLVMDGDRGELVRAGRGRSGGCGDLNDRAAMALKSHSEAXXXXXXXINAHLTTLRGL 670
            ++SSLV+D +RGELV A   R    G   +R+  ALK+HSEA       INAHL TLR L
Sbjct: 39   STSSLVLDNERGELVEA-TVRMERKGVAAERSIAALKNHSEAEKKRRARINAHLDTLRSL 97

Query: 671  IPSSDKLDKASLLAEVISHVKKLKSNATEISKGCIVPSEVDEARAEAESIGMNSVAFMIK 850
            +P + K+DKASLLAEVI+H+K+LK  ATE S+G ++P ++DE R E +  G+ S  ++I+
Sbjct: 98   VPGTRKMDKASLLAEVIAHLKELKRQATEASEGLLMPLDIDEVRVEQQEDGLLSAPYVIR 157

Query: 851  ASLSCDDRPEILADLKQTLQTFKLKTLGAEISTLSGRMKVVFLLAC--EGNISETEGH-L 1021
            AS+ CD +P IL+DL+Q L    L  + AEI+TL GRMK VF+++   EG+  + + H  
Sbjct: 158  ASICCDCKPGILSDLRQALDALHLIIMKAEIATLEGRMKNVFVMSSCKEGDSGDAKVHQF 217

Query: 1022 LTTSIQQALRSVLDRATSPQDFLLRASYPNKRRRIPLFE 1138
            L  SI QA RS+LD+ ++ Q+FLL+++  NKRRR+  F+
Sbjct: 218  LAGSIHQAFRSILDKFSASQEFLLKSTLSNKRRRVDSFK 256


>ref|XP_002522566.1| DNA binding protein, putative [Ricinus communis]
            gi|223538257|gb|EEF39866.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 227

 Score =  184 bits (467), Expect = 6e-44
 Identities = 103/219 (47%), Positives = 140/219 (63%), Gaps = 4/219 (1%)
 Frame = +2

Query: 494  SSSLVMDGDRGELVRAGRGRSGGCGDLNDRAAMALKSHSEAXXXXXXXINAHLTTLRGLI 673
            S +LV+D ++GELV+A   + G  G    +A  ALKSHSEA       INAHL TLRGL+
Sbjct: 3    SQALVLDSEKGELVKAPAPKVGKKGVSEAKALAALKSHSEAERRRRERINAHLATLRGLV 62

Query: 674  PSSDKLDKASLLAEVISHVKKLKSNATEISKGCIVPSEVDEARAEAESIGMNSVAFMIKA 853
            P ++K+DKA+LLAEVIS VK+L+ NA E SKG ++P   DE + EA   G+       KA
Sbjct: 63   PCTEKMDKATLLAEVISQVKELRKNAIEASKGLLIPMPDDEVKVEAYDNGLGDGTLYFKA 122

Query: 854  SLSCDDRPEILADLKQTLQTFKLKTLGAEISTLSGRMK-VVFLLACEGN--ISETEG-HL 1021
            SL CD RPE+L+D+KQ +   ++K L AEISTL  R+K V+FL +C     +++ E   L
Sbjct: 123  SLCCDYRPELLSDIKQAIDALQMKLLDAEISTLGVRLKNVLFLTSCRNKNAVNDAEAIKL 182

Query: 1022 LTTSIQQALRSVLDRATSPQDFLLRASYPNKRRRIPLFE 1138
            LT SI +AL SVLD+     ++  R + PNKRRR+   +
Sbjct: 183  LTNSIHEALNSVLDKGCISPEYSPRTTLPNKRRRVTFLD 221


>emb|CBI21967.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  181 bits (460), Expect = 4e-43
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 3/185 (1%)
 Frame = +2

Query: 590  MALKSHSEAXXXXXXXINAHLTTLRGLIPSSDKLDKASLLAEVISHVKKLKSNATEISKG 769
            +ALK+HSEA       INAHL TLRG+IP + K+DKASLL EV+SH+K+LK +A EISKG
Sbjct: 2    VALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKG 61

Query: 770  CIVPSEVDEARAEAESIGMNSVAFMIKASLSCDDRPEILADLKQTLQTFKLKTLGAEIST 949
             +VP ++DE R E +  G++   + IKASL CD +P +L+DL++ L T  LKT+ AEI+T
Sbjct: 62   FLVPMDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIAT 121

Query: 950  LSGRMKVVFLL-AC-EGNISETEGHLL-TTSIQQALRSVLDRATSPQDFLLRASYPNKRR 1120
            L GRMK VF++  C +GN+ +TE   L   S+ QALRSVLD+  + QDF  R++  NKR+
Sbjct: 122  LGGRMKNVFVMTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQ 181

Query: 1121 RIPLF 1135
            RI +F
Sbjct: 182  RISIF 186


>ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 263

 Score =  175 bits (444), Expect = 3e-41
 Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 4/217 (1%)
 Frame = +2

Query: 500  SLVMDGDRGELVRAGRGRSGGCGDLNDRAAMA-LKSHSEAXXXXXXXINAHLTTLRGLIP 676
            SLV+D DRGELV+A   +     ++ +  AMA LKSHS+A       INAHL TLRG +P
Sbjct: 38   SLVLDSDRGELVKAPVIKVKK--EVPEAKAMAALKSHSDAERRRRERINAHLDTLRGFVP 95

Query: 677  SSDKLDKASLLAEVISHVKKLKSNATEISKGCIVPSEVDEARAEAESIGMNSVAFMIKAS 856
             ++K+DKA+LLAEVI  VK+LK NAT+ SKG ++P E DE R E         AF ++AS
Sbjct: 96   CTEKMDKATLLAEVIQQVKELKRNATKASKGLLLPIEEDEVRVEPHD-DRTDGAFSLRAS 154

Query: 857  LSCDDRPEILADLKQTLQTFKLKTLGAEISTLSGRMKVVFLLAC--EGNISETEGH-LLT 1027
            + CD RPE+L+ +KQ L T  + T+ AEISTL GRMK VF+     +GN ++++ H LL 
Sbjct: 155  VCCDYRPELLSYIKQALDTLPINTVKAEISTLGGRMKNVFVFTSCKQGNSNDSKAHMLLA 214

Query: 1028 TSIQQALRSVLDRATSPQDFLLRASYPNKRRRIPLFE 1138
            +S+ QAL S+L + ++  +F  R ++P KRRR+ +F+
Sbjct: 215  SSVHQALSSILYKVSTSPEFSPRTTHPKKRRRVSIFD 251


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