BLASTX nr result

ID: Dioscorea21_contig00012054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012054
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77776.1| hypothetical protein OsI_16934 [Oryza sativa Indi...   141   5e-32
gb|EAZ31590.1| hypothetical protein OsJ_15731 [Oryza sativa Japo...   141   5e-32
ref|NP_001053517.1| Os04g0555500 [Oryza sativa Japonica Group] g...   141   5e-32
emb|CAE01863.2| OSJNBb0012E24.4 [Oryza sativa Japonica Group]         141   5e-32
ref|XP_002448298.1| hypothetical protein SORBIDRAFT_06g024850 [S...   138   5e-31

>gb|EEC77776.1| hypothetical protein OsI_16934 [Oryza sativa Indica Group]
          Length = 2852

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410  SDISGVLIHSLRRGRLIRKLDFV-AQAVCLSPQGVILVWNKVDKKISTFTINGVPIASTI 234
            S++SGVL+HSLR GRLIRKL+   A AVCLS QGVILVWN+  K++STFT+NG+PIA+T+
Sbjct: 2654 SNMSGVLLHSLRTGRLIRKLNVAEAHAVCLSSQGVILVWNESKKRLSTFTVNGLPIATTV 2713

Query: 233  LSPFSGKISCIEISVDGENALIGTSHIVDDPKDSDQPDSCEVGKNNPGTGDDEAHLAGTN 54
            LSPF G++SCIEIS DG  AL+GT        +    DS E G + P   + +  ++   
Sbjct: 2714 LSPFCGRVSCIEISTDGHFALMGTC----SSSNYKCEDSTETGDHEPNEPNGKDGISKQA 2769

Query: 53   ENRQTIQVPSICFLNMH 3
            E RQ++ VPS+CF+++H
Sbjct: 2770 ETRQSVHVPSVCFVDLH 2786


>gb|EAZ31590.1| hypothetical protein OsJ_15731 [Oryza sativa Japonica Group]
          Length = 2793

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410  SDISGVLIHSLRRGRLIRKLDFV-AQAVCLSPQGVILVWNKVDKKISTFTINGVPIASTI 234
            S++SGVL+HSLR GRLIRKL+   A AVCLS QGVILVWN+  K++STFT+NG+PIA+T+
Sbjct: 2595 SNMSGVLLHSLRTGRLIRKLNVAEAHAVCLSSQGVILVWNESKKRLSTFTVNGLPIATTV 2654

Query: 233  LSPFSGKISCIEISVDGENALIGTSHIVDDPKDSDQPDSCEVGKNNPGTGDDEAHLAGTN 54
            LSPF G++SCIEIS DG  AL+GT        +    DS E G + P   + +  ++   
Sbjct: 2655 LSPFCGRVSCIEISTDGHFALMGTC----SSSNYKCEDSTETGDHEPNEPNGKDGISKQA 2710

Query: 53   ENRQTIQVPSICFLNMH 3
            E RQ++ VPS+CF+++H
Sbjct: 2711 ETRQSVHVPSVCFVDLH 2727


>ref|NP_001053517.1| Os04g0555500 [Oryza sativa Japonica Group]
           gi|113565088|dbj|BAF15431.1| Os04g0555500, partial
           [Oryza sativa Japonica Group]
          Length = 477

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 SDISGVLIHSLRRGRLIRKLDFV-AQAVCLSPQGVILVWNKVDKKISTFTINGVPIASTI 234
           S++SGVL+HSLR GRLIRKL+   A AVCLS QGVILVWN+  K++STFT+NG+PIA+T+
Sbjct: 279 SNMSGVLLHSLRTGRLIRKLNVAEAHAVCLSSQGVILVWNESKKRLSTFTVNGLPIATTV 338

Query: 233 LSPFSGKISCIEISVDGENALIGTSHIVDDPKDSDQPDSCEVGKNNPGTGDDEAHLAGTN 54
           LSPF G++SCIEIS DG  AL+GT        +    DS E G + P   + +  ++   
Sbjct: 339 LSPFCGRVSCIEISTDGHFALMGTC----SSSNYKCEDSTETGDHEPNEPNGKDGISKQA 394

Query: 53  ENRQTIQVPSICFLNMH 3
           E RQ++ VPS+CF+++H
Sbjct: 395 ETRQSVHVPSVCFVDLH 411


>emb|CAE01863.2| OSJNBb0012E24.4 [Oryza sativa Japonica Group]
          Length = 2890

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410  SDISGVLIHSLRRGRLIRKLDFV-AQAVCLSPQGVILVWNKVDKKISTFTINGVPIASTI 234
            S++SGVL+HSLR GRLIRKL+   A AVCLS QGVILVWN+  K++STFT+NG+PIA+T+
Sbjct: 2692 SNMSGVLLHSLRTGRLIRKLNVAEAHAVCLSSQGVILVWNESKKRLSTFTVNGLPIATTV 2751

Query: 233  LSPFSGKISCIEISVDGENALIGTSHIVDDPKDSDQPDSCEVGKNNPGTGDDEAHLAGTN 54
            LSPF G++SCIEIS DG  AL+GT        +    DS E G + P   + +  ++   
Sbjct: 2752 LSPFCGRVSCIEISTDGHFALMGTC----SSSNYKCEDSTETGDHEPNEPNGKDGISKQA 2807

Query: 53   ENRQTIQVPSICFLNMH 3
            E RQ++ VPS+CF+++H
Sbjct: 2808 ETRQSVHVPSVCFVDLH 2824


>ref|XP_002448298.1| hypothetical protein SORBIDRAFT_06g024850 [Sorghum bicolor]
            gi|241939481|gb|EES12626.1| hypothetical protein
            SORBIDRAFT_06g024850 [Sorghum bicolor]
          Length = 873

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/139 (52%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
 Frame = -3

Query: 410  SDISGVLIHSLRRGRLIRKLDFV-AQAVCLSPQGVILVWNKVDKKISTFTINGVPIASTI 234
            S+ +GVL+HSLR GRLIRKLD   A A+CLS QG+ILVWN+  K +STFT+NG+PIA+++
Sbjct: 674  SNATGVLLHSLRTGRLIRKLDVAEAHAICLSSQGIILVWNETKKTLSTFTVNGLPIATSV 733

Query: 233  LSPFSGKISCIEISVDGENALIGTSHIVDDPKDSDQPDSCEVGKN--NPGTGDDEAHLAG 60
            L PFSG++SCI++S DG  ALIGTS   +   DS    S E G +   P   DD +  + 
Sbjct: 734  LLPFSGQVSCIDVSTDGHFALIGTSLFNNYKCDS----STETGDHELGPNGTDDVSKNSE 789

Query: 59   TNENRQTIQVPSICFLNMH 3
             +E  QT+ VPSICF+++H
Sbjct: 790  QSETEQTVHVPSICFVDLH 808


Top