BLASTX nr result

ID: Dioscorea21_contig00012048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012048
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   614   e-173
dbj|BAK01768.1| predicted protein [Hordeum vulgare subsp. vulgar...   613   e-173
emb|CBI22115.3| unnamed protein product [Vitis vinifera]              612   e-173
ref|XP_003580534.1| PREDICTED: pentatricopeptide repeat-containi...   611   e-172
ref|NP_001053849.1| Os04g0612800 [Oryza sativa Japonica Group] g...   610   e-172

>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  614 bits (1583), Expect = e-173
 Identities = 302/370 (81%), Positives = 338/370 (91%)
 Frame = -1

Query: 1149 GNVDNAMKLYNSMTNAGLKPGLTTYTCLLSVLANKKLIDLAAKVLLEMKSLGFSVDVNAS 970
            G VD+AMKLYNSMTNAGL+PGL+TYT LL++LANKKL+D+AAKVLLEMK++GFSVDV+AS
Sbjct: 473  GQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSAS 532

Query: 969  DVLMIYIKDGSTELALKWLRFMGSAGIRTNNFIVRQLFESCMKTGLYDSARPLLEMYVGS 790
            DVLM+YIKDGS +LAL+WLRFMGS+GIRTNNFI+RQLFESCMK GLY+SA+PLLE YV S
Sbjct: 533  DVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 592

Query: 789  AAKVDLVLYTSILAHSVRCQDEKNEKAIMDIMSVTRHKAHEFMCGLFTGPEQRKKPVLSF 610
            AAKVDL+LYTSILAH VRCQ+E+NE+ +M I+S T+HKAH FMCGLFTGPEQRK+PVLSF
Sbjct: 593  AAKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPVLSF 652

Query: 609  VREFFQGIDYETEESAARYFXXXXXXXXXLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 430
            VREFFQ +DYE EE AARYF         LMGQ+NRARCVWKVAYENKLFPKAIVFDQHI
Sbjct: 653  VREFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHI 712

Query: 429  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGSTLKMVVAQVLASVES 250
            AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTG TLK+VVAQ+L SVES
Sbjct: 713  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVES 772

Query: 249  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNDIPSRPDVLMHKLNVLFPSSAPDVRSLSP 70
            PFEVSKVVLRAPGDSV+EWFKKPIVQQFL+N+IPSR D+LMHKLN LFPSSAP++RSLSP
Sbjct: 773  PFEVSKVVLRAPGDSVMEWFKKPIVQQFLINEIPSRADILMHKLNTLFPSSAPEIRSLSP 832

Query: 69   VKPLAMSRMM 40
             KPL   + M
Sbjct: 833  PKPLISGKAM 842


>dbj|BAK01768.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326520708|dbj|BAJ92717.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 776

 Score =  613 bits (1582), Expect = e-173
 Identities = 305/368 (82%), Positives = 338/368 (91%)
 Frame = -1

Query: 1149 GNVDNAMKLYNSMTNAGLKPGLTTYTCLLSVLANKKLIDLAAKVLLEMKSLGFSVDVNAS 970
            GNVD AMK+Y+SM NAG +PGL+T+T LL++LANKKL+DLAAKVLLEMK+ GF ++V AS
Sbjct: 409  GNVDVAMKMYHSMANAGTRPGLSTFTSLLTMLANKKLLDLAAKVLLEMKASGFPIEVTAS 468

Query: 969  DVLMIYIKDGSTELALKWLRFMGSAGIRTNNFIVRQLFESCMKTGLYDSARPLLEMYVGS 790
            D+LMIYIKDGSTELAL+WLRFMGSAGIRTNNFI+RQLFESCMK GLYDSARPLLE YV +
Sbjct: 469  DLLMIYIKDGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKMGLYDSARPLLETYVSA 528

Query: 789  AAKVDLVLYTSILAHSVRCQDEKNEKAIMDIMSVTRHKAHEFMCGLFTGPEQRKKPVLSF 610
            AAKVD++LYTSILAH VRCQDE +E+AIM+I+SV+RHKAH+FMCGLFTGPEQRKKPVLSF
Sbjct: 529  AAKVDMILYTSILAHLVRCQDEDSERAIMNILSVSRHKAHDFMCGLFTGPEQRKKPVLSF 588

Query: 609  VREFFQGIDYETEESAARYFXXXXXXXXXLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 430
            VREFFQGIDYE EESAARYF         LMGQMNRARCVWKVAYENKLFPKAIVFDQHI
Sbjct: 589  VREFFQGIDYENEESAARYFVNVLLNYLVLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 648

Query: 429  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGSTLKMVVAQVLASVES 250
            AWSLD+RNLSVGAALV+ VHTLHRFRKRMLYYGVVPRRIKLVTG TLKMVVAQVLAS+ES
Sbjct: 649  AWSLDIRNLSVGAALVSTVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKMVVAQVLASLES 708

Query: 249  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNDIPSRPDVLMHKLNVLFPSSAPDVRSLSP 70
            PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLN+IPS+ DVLMHKLNV+FPSSAP+ RSL+ 
Sbjct: 709  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSKSDVLMHKLNVMFPSSAPEARSLAL 768

Query: 69   VKPLAMSR 46
             + L M+R
Sbjct: 769  PRSLGMTR 776


>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  612 bits (1579), Expect = e-173
 Identities = 301/364 (82%), Positives = 336/364 (92%)
 Frame = -1

Query: 1149 GNVDNAMKLYNSMTNAGLKPGLTTYTCLLSVLANKKLIDLAAKVLLEMKSLGFSVDVNAS 970
            G VD+AMKLYNSMTNAGL+PGL+TYT LL++LANKKL+D+AAKVLLEMK++GFSVDV+AS
Sbjct: 386  GQVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSAS 445

Query: 969  DVLMIYIKDGSTELALKWLRFMGSAGIRTNNFIVRQLFESCMKTGLYDSARPLLEMYVGS 790
            DVLM+YIKDGS +LAL+WLRFMGS+GIRTNNFI+RQLFESCMK GLY+SA+PLLE YV S
Sbjct: 446  DVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNS 505

Query: 789  AAKVDLVLYTSILAHSVRCQDEKNEKAIMDIMSVTRHKAHEFMCGLFTGPEQRKKPVLSF 610
            AAKVDL+LYTSILAH VRCQ+E+NE+ +M I+S T+HKAH FMCGLFTGPEQRK+PVLSF
Sbjct: 506  AAKVDLILYTSILAHLVRCQEEQNERHLMLILSATKHKAHTFMCGLFTGPEQRKQPVLSF 565

Query: 609  VREFFQGIDYETEESAARYFXXXXXXXXXLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 430
            VREFFQ +DYE EE AARYF         LMGQ+NRARCVWKVAYENKLFPKAIVFDQHI
Sbjct: 566  VREFFQSVDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHI 625

Query: 429  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGSTLKMVVAQVLASVES 250
            AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTG TLK+VVAQ+L SVES
Sbjct: 626  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLNSVES 685

Query: 249  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNDIPSRPDVLMHKLNVLFPSSAPDVRSLSP 70
            PFEVSKVVLRAPGDSV+EWFKKPIVQQFL+N+IPSR D+LMHKLN LFPSSAP++RSLSP
Sbjct: 686  PFEVSKVVLRAPGDSVMEWFKKPIVQQFLINEIPSRADILMHKLNTLFPSSAPEIRSLSP 745

Query: 69   VKPL 58
             KPL
Sbjct: 746  PKPL 749


>ref|XP_003580534.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Brachypodium distachyon]
          Length = 775

 Score =  611 bits (1575), Expect = e-172
 Identities = 304/368 (82%), Positives = 337/368 (91%)
 Frame = -1

Query: 1149 GNVDNAMKLYNSMTNAGLKPGLTTYTCLLSVLANKKLIDLAAKVLLEMKSLGFSVDVNAS 970
            G VD AM++Y+SM NAG +PGL+T+T LL++LANK+L+DLAAKVLLEMK+ GF ++V AS
Sbjct: 408  GQVDIAMRMYHSMANAGTRPGLSTFTALLTMLANKRLLDLAAKVLLEMKASGFPIEVTAS 467

Query: 969  DVLMIYIKDGSTELALKWLRFMGSAGIRTNNFIVRQLFESCMKTGLYDSARPLLEMYVGS 790
            D+LMIYIKDGSTELAL+WLRFMGSAGIRTNNFI+RQLFESCMK GLYDSARPLLE YVG+
Sbjct: 468  DLLMIYIKDGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKMGLYDSARPLLETYVGA 527

Query: 789  AAKVDLVLYTSILAHSVRCQDEKNEKAIMDIMSVTRHKAHEFMCGLFTGPEQRKKPVLSF 610
            AAKVD++LYTSILAH VRCQDE +E AIMDI+SV+RHKAH+FMCGLFTGPEQRKKPVLSF
Sbjct: 528  AAKVDMILYTSILAHLVRCQDEGSEWAIMDILSVSRHKAHDFMCGLFTGPEQRKKPVLSF 587

Query: 609  VREFFQGIDYETEESAARYFXXXXXXXXXLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 430
            VREFFQGIDY+ EESAARYF         LMGQMNRARCVWKVAYENKLFPKAIVFDQHI
Sbjct: 588  VREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 647

Query: 429  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGSTLKMVVAQVLASVES 250
            AWSLD+RNLSVGAALV+ VHTLHRFRKRMLYYGVVPRRIKLVTG TLKMVVAQVLAS+ES
Sbjct: 648  AWSLDIRNLSVGAALVSTVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKMVVAQVLASLES 707

Query: 249  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNDIPSRPDVLMHKLNVLFPSSAPDVRSLSP 70
            PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLN+IPS+ DVLMHKLNV+FPSSAP+VRSL+ 
Sbjct: 708  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSKSDVLMHKLNVMFPSSAPEVRSLNL 767

Query: 69   VKPLAMSR 46
             + L M R
Sbjct: 768  PRSLGMPR 775


>ref|NP_001053849.1| Os04g0612800 [Oryza sativa Japonica Group]
            gi|38568022|emb|CAE05207.3| OSJNBa0070C17.14 [Oryza
            sativa Japonica Group] gi|113565420|dbj|BAF15763.1|
            Os04g0612800 [Oryza sativa Japonica Group]
          Length = 784

 Score =  610 bits (1572), Expect = e-172
 Identities = 304/368 (82%), Positives = 336/368 (91%)
 Frame = -1

Query: 1149 GNVDNAMKLYNSMTNAGLKPGLTTYTCLLSVLANKKLIDLAAKVLLEMKSLGFSVDVNAS 970
            G VD AM+LY+SM NAG +PGL+T+T LL +LANK+++DLAAKVLLEMK+ GF ++V AS
Sbjct: 417  GQVDAAMRLYHSMANAGQRPGLSTFTALLMMLANKRMLDLAAKVLLEMKASGFPIEVTAS 476

Query: 969  DVLMIYIKDGSTELALKWLRFMGSAGIRTNNFIVRQLFESCMKTGLYDSARPLLEMYVGS 790
            D+LMIYIK+GSTELAL+WLRFMGSAGIRTNNFI+RQLFESCMKTGLYDSARPLLE YV  
Sbjct: 477  DLLMIYIKEGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSARPLLETYVAG 536

Query: 789  AAKVDLVLYTSILAHSVRCQDEKNEKAIMDIMSVTRHKAHEFMCGLFTGPEQRKKPVLSF 610
            AAKVDL+LYTSILAH VRCQDE  E+AIMDI+SV++HKAH+FMCGLFTGPEQRKKPVLSF
Sbjct: 537  AAKVDLILYTSILAHLVRCQDEGRERAIMDILSVSKHKAHDFMCGLFTGPEQRKKPVLSF 596

Query: 609  VREFFQGIDYETEESAARYFXXXXXXXXXLMGQMNRARCVWKVAYENKLFPKAIVFDQHI 430
            VREFFQGIDY+ EESAARYF         LMGQMNRARC+WKVAYENKLF KAIVFDQHI
Sbjct: 597  VREFFQGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCIWKVAYENKLFAKAIVFDQHI 656

Query: 429  AWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGSTLKMVVAQVLASVES 250
            AWSLDVRNLSVGAALVA VHTLHRFRKRMLYYGVVPRRIKLVTG TLKMVVAQVLAS+ES
Sbjct: 657  AWSLDVRNLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKMVVAQVLASLES 716

Query: 249  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNDIPSRPDVLMHKLNVLFPSSAPDVRSLSP 70
            PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLN+IPS+ DVLMH+LNV+FPSSAP+VRSLS 
Sbjct: 717  PFEVSKVVLRAPGDSVLEWFKKPIVQQFLLNEIPSKADVLMHRLNVMFPSSAPEVRSLSI 776

Query: 69   VKPLAMSR 46
             + L+MSR
Sbjct: 777  PRSLSMSR 784


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