BLASTX nr result

ID: Dioscorea21_contig00012038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012038
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...    93   6e-17
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]    93   6e-17
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...    75   2e-11
ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|2...    72   8e-11

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
 Frame = -2

Query: 694 KAHGKDGNVKMGRFSSMDQVVDELSPTVPSVVGLSSQEDDNNNNDAWMNYPIEDPMFQID 515
           K  G   N KMG+F SMD ++++   +VPS     SQ+DD      W+NYPI++ + Q D
Sbjct: 70  KDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDD---MVPWLNYPIDESL-QHD 125

Query: 514 YCSEFFSQFSGVDLNSVTT----------NAKTTTERITSFGCGRASQNIKVGNASRGIT 365
           YCS+F  + SGV +N ++T          N+   T + ++        +++ GNAS+   
Sbjct: 126 YCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKASA 185

Query: 364 EGSDPPSRIRKSQLF-HLPQQCQSAIPNSKPKEATEFRIHGITSSHQXXXXXXXXXXXXX 188
            G + PSR R SQL+    QQCQ+  P+ + K +    I   TS+               
Sbjct: 186 AGVE-PSRPRSSQLYPPSSQQCQTLFPSMRSKVSDP--ISNNTSNAMHHTVSGNSIRLPA 242

Query: 187 XXXXXVLLKTWSQKQQDTASTKVPXXXXXXXXXXGLMNFSHFSRAASSFKANLQ 26
                   KT   ++QD   T+            GLMNFSHFSR A+  KANLQ
Sbjct: 243 STSGFSSTKT---QKQDPGQTR---------NNSGLMNFSHFSRPAALVKANLQ 284


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
 Frame = -2

Query: 694 KAHGKDGNVKMGRFSSMDQVVDELSPTVPSVVGLSSQEDDNNNNDAWMNYPIEDPMFQID 515
           K  G   N KMG+F SMD ++++   +VPS     SQ+DD      W+NYPI++ + Q D
Sbjct: 70  KDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDD---MVPWLNYPIDESL-QHD 125

Query: 514 YCSEFFSQFSGVDLNSVTT----------NAKTTTERITSFGCGRASQNIKVGNASRGIT 365
           YCS+F  + SGV +N ++T          N+   T + ++        +++ GNAS+   
Sbjct: 126 YCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKASA 185

Query: 364 EGSDPPSRIRKSQLF-HLPQQCQSAIPNSKPKEATEFRIHGITSSHQXXXXXXXXXXXXX 188
            G + PSR R SQL+    QQCQ+  P+ + K +    I   TS+               
Sbjct: 186 AGVE-PSRPRSSQLYPPSSQQCQTLFPSMRSKVSDP--ISNNTSNAMHHTVSGNSIRLPA 242

Query: 187 XXXXXVLLKTWSQKQQDTASTKVPXXXXXXXXXXGLMNFSHFSRAASSFKANLQ 26
                   KT   ++QD   T+            GLMNFSHFSR A+  KANLQ
Sbjct: 243 STSGFSSTKT---QKQDPGQTR---------NNSGLMNFSHFSRPAALVKANLQ 284


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
           gi|223548548|gb|EEF50039.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 758

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
 Frame = -2

Query: 685 GKDGNVKMGRFSSMDQVVDELSPTVPSVVGLSSQEDDNNNNDAWMNYPIEDPMFQIDYCS 506
           G   N KMGRF +MD  +DE+  +VPSV    +QEDD      W+N PI+D + Q DYC 
Sbjct: 77  GNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQEDD---MVPWLNDPIDDSL-QQDYCH 132

Query: 505 EFFSQFSGVDLNSVTTNAKTTTER------------ITSFGCGRASQNIKVGNASRGITE 362
           EF ++ SGV +N    N+  ++++              S   G + +   +   S G  +
Sbjct: 133 EFLAELSGVTVNEHAQNSFASSDKKCNGNQSVRDSHTASVHNGLSLEQGHMPRVSSG-RD 191

Query: 361 GSDPPSRIRKSQLFHLP-QQCQSAIPNSKPKEATEFRIHGITSSHQXXXXXXXXXXXXXX 185
           G    SR   SQL+    QQCQ++ P+ +    +    +   S++               
Sbjct: 192 GDATRSRTTASQLYSSSVQQCQASFPHFR----SRISANNAESTNNSTHVASSGDPIRGS 247

Query: 184 XXXXVLLKTWSQKQQDTASTKVPXXXXXXXXXXGLMNFSHFSRAASSFKANLQ 26
                     +QKQ    +T              LMNFSHFSR  +  KAN +
Sbjct: 248 PSGGGFPSIKAQKQVPVLAT----------TNSSLMNFSHFSRPVALAKANFE 290


>ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|222871472|gb|EEF08603.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 69/245 (28%), Positives = 103/245 (42%), Gaps = 25/245 (10%)
 Frame = -2

Query: 685 GKDGNVKMGRFSSMDQVVDELSPTVPSVVGLSSQEDDNNNNDAWMNYPIEDPMFQIDYCS 506
           G   +++ G+F  M+  ++EL  +VP+V    +Q+DD      W+NYP+++   Q DYCS
Sbjct: 66  GNGTDIRTGKFGMMESTLNELPMSVPAVEMGVNQDDD---MVPWLNYPLDESP-QHDYCS 121

Query: 505 EFFSQFSGVDLNSVTTNAKTTTERITSFGCGRASQNIK------------------VGNA 380
           EF  + SG     VT N  ++     SFG    SQ+++                    N+
Sbjct: 122 EFLPELSG-----VTVNGHSSQSNFPSFGKKSFSQSVRDSRTVSVHNGLSLEQGDVAKNS 176

Query: 379 SRGITEGSDPPSRIRKSQLF-HLPQQCQSAIP------NSKPKEATEFRIHGITSSHQXX 221
           S G TE + P  R   SQL+    + CQ++ P      ++K  ++T    H + S     
Sbjct: 177 SAGDTEANRP--RTSASQLYLSSSEHCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSIR 234

Query: 220 XXXXXXXXXXXXXXXXVLLKTWSQKQQDTASTKVPXXXXXXXXXXGLMNFSHFSRAASSF 41
                                  QKQ    ST              LMNFSHF+R A+  
Sbjct: 235 APTSGGGFPSIK----------MQKQVPAQST----------TNSSLMNFSHFARPAALA 274

Query: 40  KANLQ 26
           KANLQ
Sbjct: 275 KANLQ 279


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