BLASTX nr result

ID: Dioscorea21_contig00012030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012030
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...    95   7e-18
gb|ACH87180.1| unknown protein [Camellia sinensis]                     88   6e-16
ref|XP_002303786.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003524904.1| PREDICTED: uncharacterized protein LOC100803...    87   1e-15
ref|XP_003524903.1| PREDICTED: uncharacterized protein LOC100803...    87   1e-15

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/114 (42%), Positives = 65/114 (57%)
 Frame = +1

Query: 43  RAGGEDQKVFYELCALLFSVIKSPPGAVSVSTXXXXXXXXXXXXXSQVTPXXXXXXXXXX 222
           R   +  +VF EL AL+ ++++SPP     S              +Q++P          
Sbjct: 3   RQQDQQSRVFCELSALVLNLLRSPPSPAPFSEHSPEVYTSRRPTTTQISPAGFASLLLGI 62

Query: 223 XXXXXXCGSVTFVIGFILMPWVLGMLMVFYFVGIVSSLSGIGRAILCPSTPTPK 384
                 CGSVTF IGFILMPWVLG++MVFYFVGIVS+LS +GRAI+C +T   K
Sbjct: 63  SLALMLCGSVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIICQATAPAK 116


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +1

Query: 40  MRAGGEDQKVFYELCALLFSVIKSPPGAVSVS--TXXXXXXXXXXXXXSQVTPXXXXXXX 213
           MR   +  +VF EL AL+ ++++SPP  +  S  +               ++P       
Sbjct: 2   MRRQDQQSRVFCELSALILNLLRSPPTPIQFSDPSPAAVPSSRRRPETPPISPAGFASLL 61

Query: 214 XXXXXXXXXCGSVTFVIGFILMPWVLGMLMVFYFVGIVSSLSGIGRAILCPST 372
                    CGSVTF IGF+LMPWVLG++MVFY VGIVSSLS IGRAILC +T
Sbjct: 62  LGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTT 114


>ref|XP_002303786.1| predicted protein [Populus trichocarpa] gi|222841218|gb|EEE78765.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
 Frame = +1

Query: 40  MRAGGEDQ--KVFYELCALLFSVIKSPPGAVSVSTXXXXXXXXXXXXXSQVTPXXXXXXX 213
           MR   +DQ  +V  EL AL+F++++SP   +S S                +TP       
Sbjct: 2   MRRQNQDQQSRVLDELSALVFNLLRSPSTPISFSDQFPVPSTSVRRRLPGITPGGFASLL 61

Query: 214 XXXXXXXXXCGSVTFVIGFILMPWVLGMLMVFYFVGIVSSLSGIGRAILC-PSTPTPK 384
                    CGSVTF IGF+LMPWVLG++MVFY  G+VS++S +GR+ILC  +TP+P+
Sbjct: 62  LGISLALMLCGSVTFFIGFLLMPWVLGLVMVFYVAGVVSTVSMLGRSILCYATTPSPR 119


>ref|XP_003524904.1| PREDICTED: uncharacterized protein LOC100803665 isoform 2 [Glycine
           max]
          Length = 112

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
 Frame = +1

Query: 49  GGEDQ--KVFYELCALLFSVIKSPPGAVSVSTXXXXXXXXXXXXXSQVTPXXXXXXXXXX 222
           G EDQ  +VF EL AL+F++++SP       +             +Q+TP          
Sbjct: 3   GQEDQQSRVFCELSALVFNLLRSP-------SIVPEPPARRSPAGAQITPAGFASLLLGI 55

Query: 223 XXXXXXCGSVTFVIGFILMPWVLGMLMVFYFVGIVSSLSGIGRAILCPSTP 375
                 CGSVTF IGF+LMPWVLG++MVFY  G+VSSLS +GR+ILC +TP
Sbjct: 56  SVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILCYATP 106


>ref|XP_003524903.1| PREDICTED: uncharacterized protein LOC100803665 isoform 1 [Glycine
           max]
          Length = 116

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
 Frame = +1

Query: 49  GGEDQ--KVFYELCALLFSVIKSPPGAVSVSTXXXXXXXXXXXXXSQVTPXXXXXXXXXX 222
           G EDQ  +VF EL AL+F++++SP       +             +Q+TP          
Sbjct: 3   GQEDQQSRVFCELSALVFNLLRSP-------SIVPEPPARRSPAGAQITPAGFASLLLGI 55

Query: 223 XXXXXXCGSVTFVIGFILMPWVLGMLMVFYFVGIVSSLSGIGRAILCPSTP 375
                 CGSVTF IGF+LMPWVLG++MVFY  G+VSSLS +GR+ILC +TP
Sbjct: 56  SVALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGVVSSLSVLGRSILCYATP 106


Top