BLASTX nr result

ID: Dioscorea21_contig00012025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012025
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX82676.1| multiprotein bridging factor 1 [Vitis pseudoretic...   110   3e-22
ref|XP_002280992.1| PREDICTED: multiprotein-bridging factor 1a [...   110   3e-22
ref|XP_003634667.1| PREDICTED: multiprotein-bridging factor 1a-l...   110   3e-22
ref|XP_002317456.1| predicted protein [Populus trichocarpa] gi|1...   110   4e-22
emb|CAA89698.1| orf [Ricinus communis]                                109   7e-22

>gb|AFX82676.1| multiprotein bridging factor 1 [Vitis pseudoreticulata]
          Length = 142

 Score =  110 bits (275), Expect = 3e-22
 Identities = 63/106 (59%), Positives = 71/106 (66%)
 Frame = -3

Query: 752 KLDEESDNLTHDRVPTELKKNIMQARMDKKIYPGATCSDMPCFPCPLNNSCL*VNHVDTV 573
           KLDEE++NL HDRVPTELKK+IMQARMDKK+    T S +                    
Sbjct: 66  KLDEETENLAHDRVPTELKKSIMQARMDKKL----TQSQL-------------------- 101

Query: 572 NPTLSTQLINEKPQVIQEYESGKAIPNQQIINKLERVLGVKLRGRK 435
                 Q+INEKPQ+IQEYESGKAIPNQQII KLER LGVKLRG+K
Sbjct: 102 -----AQMINEKPQIIQEYESGKAIPNQQIIVKLERALGVKLRGKK 142


>ref|XP_002280992.1| PREDICTED: multiprotein-bridging factor 1a [Vitis vinifera]
           gi|147865629|emb|CAN83249.1| hypothetical protein
           VITISV_019642 [Vitis vinifera]
           gi|302143433|emb|CBI21994.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  110 bits (275), Expect = 3e-22
 Identities = 63/106 (59%), Positives = 71/106 (66%)
 Frame = -3

Query: 752 KLDEESDNLTHDRVPTELKKNIMQARMDKKIYPGATCSDMPCFPCPLNNSCL*VNHVDTV 573
           KLDEE++NL HDRVPTELKK+IMQARMDKK+    T S +                    
Sbjct: 66  KLDEETENLAHDRVPTELKKSIMQARMDKKL----TQSQL-------------------- 101

Query: 572 NPTLSTQLINEKPQVIQEYESGKAIPNQQIINKLERVLGVKLRGRK 435
                 Q+INEKPQ+IQEYESGKAIPNQQII KLER LGVKLRG+K
Sbjct: 102 -----AQMINEKPQIIQEYESGKAIPNQQIIVKLERALGVKLRGKK 142


>ref|XP_003634667.1| PREDICTED: multiprotein-bridging factor 1a-like [Vitis vinifera]
           gi|147777777|emb|CAN60297.1| hypothetical protein
           VITISV_017760 [Vitis vinifera]
           gi|302142891|emb|CBI20186.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/106 (57%), Positives = 69/106 (65%)
 Frame = -3

Query: 752 KLDEESDNLTHDRVPTELKKNIMQARMDKKIYPGATCSDMPCFPCPLNNSCL*VNHVDTV 573
           KLDEE++NLTH+RVPTELKK+IMQAR+DKK+                             
Sbjct: 66  KLDEETENLTHERVPTELKKSIMQARLDKKLTQAQLA----------------------- 102

Query: 572 NPTLSTQLINEKPQVIQEYESGKAIPNQQIINKLERVLGVKLRGRK 435
                 Q+INEKPQVIQEYESGKAIPNQQII KLER LGVKLRG+K
Sbjct: 103 ------QMINEKPQVIQEYESGKAIPNQQIITKLERALGVKLRGKK 142


>ref|XP_002317456.1| predicted protein [Populus trichocarpa] gi|118485147|gb|ABK94436.1|
           unknown [Populus trichocarpa]
           gi|222860521|gb|EEE98068.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score =  110 bits (274), Expect = 4e-22
 Identities = 61/106 (57%), Positives = 68/106 (64%)
 Frame = -3

Query: 752 KLDEESDNLTHDRVPTELKKNIMQARMDKKIYPGATCSDMPCFPCPLNNSCL*VNHVDTV 573
           KLD+E++NLTHDRVPTELKK IMQARMDKK+                             
Sbjct: 64  KLDDETENLTHDRVPTELKKAIMQARMDKKLTQAQLA----------------------- 100

Query: 572 NPTLSTQLINEKPQVIQEYESGKAIPNQQIINKLERVLGVKLRGRK 435
                 Q+INEKPQ+IQEYESGKAIPNQQII KLER LGVKLRG+K
Sbjct: 101 ------QVINEKPQIIQEYESGKAIPNQQIIGKLERALGVKLRGKK 140


>emb|CAA89698.1| orf [Ricinus communis]
          Length = 142

 Score =  109 bits (272), Expect = 7e-22
 Identities = 61/106 (57%), Positives = 67/106 (63%)
 Frame = -3

Query: 752 KLDEESDNLTHDRVPTELKKNIMQARMDKKIYPGATCSDMPCFPCPLNNSCL*VNHVDTV 573
           KLDEE++NLTHDRVPTELKK IMQARM+KK                              
Sbjct: 66  KLDEETENLTHDRVPTELKKAIMQARMEKKFTQAQLA----------------------- 102

Query: 572 NPTLSTQLINEKPQVIQEYESGKAIPNQQIINKLERVLGVKLRGRK 435
                 Q+INEKPQ+IQEYESGKAIPNQQII KLER LGVKLRG+K
Sbjct: 103 ------QMINEKPQIIQEYESGKAIPNQQIIGKLERALGVKLRGKK 142


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