BLASTX nr result

ID: Dioscorea21_contig00011139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00011139
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533013.1| conserved hypothetical protein [Ricinus comm...    45   2e-08
ref|XP_002533009.1| hypothetical protein RCOM_1170110 [Ricinus c...    40   2e-07

>ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
           gi|223527202|gb|EEF29367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1031

 Score = 45.4 bits (106), Expect(2) = 2e-08
 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = +2

Query: 74  FVDSSQRSLLACTRSSSGGDC--LKDSNITMVELKNTTWVDKTYSIFPS 214
           F+D SQ++L  C ++SS  DC  L +SN TM EL++ TW D  YSI  S
Sbjct: 323 FIDHSQKNL-GCKKNSSSVDCTSLAESNFTMHELRDITWEDNPYSILSS 370



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 1   VCGLNSYCSLVDDGVVCLCPRGFDF 75
           +CGLNSYC+L      C+C  GFDF
Sbjct: 299 LCGLNSYCTLAGGSPTCVCTPGFDF 323


>ref|XP_002533009.1| hypothetical protein RCOM_1170110 [Ricinus communis]
           gi|223527198|gb|EEF29363.1| hypothetical protein
           RCOM_1170110 [Ricinus communis]
          Length = 696

 Score = 40.4 bits (93), Expect(2) = 2e-07
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +1

Query: 1   VCGLNSYCSLVDDGVVCLCPRGFDF 75
           +CGLNSYC+LVD    C+C  GF+F
Sbjct: 270 LCGLNSYCTLVDQDSACICLPGFEF 294



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +2

Query: 74  FVDSSQRSLLACTRSSSGGDCL--KDSNITMVELKNTTWVDKTYSIFPS 214
           FVD  Q +L  C R+S+  DC+  ++SN+TM EL + +W D  Y I  S
Sbjct: 294 FVDQGQENL-GCKRNSTLDDCISFRESNVTMQELTSISWEDDPYYILES 341


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