BLASTX nr result

ID: Dioscorea21_contig00010988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010988
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN34059.1| unknown [Zea mays] gi|414871639|tpg|DAA50196.1| T...   119   2e-25
gb|ACG47963.1| guanine nucleotide-binding protein-like 3 [Zea mays]   116   2e-24
gb|ACN32090.1| unknown [Zea mays] gi|413933710|gb|AFW68261.1| hy...   113   1e-23
ref|XP_002464274.1| hypothetical protein SORBIDRAFT_01g015410 [S...   113   2e-23
ref|NP_001043076.1| Os01g0375000 [Oryza sativa Japonica Group] g...   112   3e-23

>gb|ACN34059.1| unknown [Zea mays] gi|414871639|tpg|DAA50196.1| TPA: guanine
           nucleotide-binding protein-like 3 [Zea mays]
          Length = 592

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/119 (45%), Positives = 78/119 (65%)
 Frame = -1

Query: 359 VVVSEFGKEFNVDDVYKTECSFIGTLPSVEEFNHVEVPPSSPPNFDEQMMDEGAVEQNEV 180
           V++SE GKEFN+D++YK E S+IG L S+EEF+H+E+PP++PP  DE+M+++G+      
Sbjct: 434 VIISEDGKEFNIDEIYKAESSYIGGLKSIEEFHHIEIPPNAPPAIDEEMLEDGSKPSEPA 493

Query: 179 TQNDESMARDSKDPEEIKQNTSNRQNDKLYTAEGILDPXXXXXXXXXXXXXKLNSANDM 3
            +N E    D+ DP+  K  T++ QNDKLYTAEGILDP             + +  NDM
Sbjct: 494 QENREEQMSDANDPQGSKPATASTQNDKLYTAEGILDPRKRKAEKKRRKANRFSVLNDM 552


>gb|ACG47963.1| guanine nucleotide-binding protein-like 3 [Zea mays]
          Length = 592

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/119 (44%), Positives = 77/119 (64%)
 Frame = -1

Query: 359 VVVSEFGKEFNVDDVYKTECSFIGTLPSVEEFNHVEVPPSSPPNFDEQMMDEGAVEQNEV 180
           V++SE  KEFN+D++YK E S+IG L S+EEF+H+E+PP++PP  DE+M+++G+      
Sbjct: 434 VIISEDVKEFNIDEIYKAESSYIGGLKSIEEFHHIEIPPNAPPAIDEEMLEDGSKPSEPA 493

Query: 179 TQNDESMARDSKDPEEIKQNTSNRQNDKLYTAEGILDPXXXXXXXXXXXXXKLNSANDM 3
            +N E    D+ DP+  K  T++ QNDKLYTAEGILDP             + +  NDM
Sbjct: 494 QENREEQMSDANDPQGSKPATASTQNDKLYTAEGILDPRKRKAEKKRRKANRFSLLNDM 552


>gb|ACN32090.1| unknown [Zea mays] gi|413933710|gb|AFW68261.1| hypothetical protein
           ZEAMMB73_025896 [Zea mays]
          Length = 594

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
 Frame = -1

Query: 362 AVVVSEFGKEFNVDDVYKTECSFIGTLPSVEEFNHVEVPPSSPPNFDEQMMDEGAVEQNE 183
           AV++SE GKEFN+DD+YK E S+IG L S+EEF+H+E+PP++PP  DE+M+++G  + +E
Sbjct: 429 AVIISEDGKEFNIDDIYKAESSYIGGLKSIEEFHHIEIPPNAPPAIDEEMLEDGGKKPSE 488

Query: 182 VTQND---ESMARDSKDPEEIKQNTSNRQNDKLYTAEGILDPXXXXXXXXXXXXXKLNSA 12
             Q     E    D KD    K  +++ QNDKLYTAEG+LDP             + ++ 
Sbjct: 489 AIQESRDREEQMPDVKDSGGSKAASASTQNDKLYTAEGVLDPRKSKAEKKRRKASRPSAL 548

Query: 11  NDM 3
           NDM
Sbjct: 549 NDM 551


>ref|XP_002464274.1| hypothetical protein SORBIDRAFT_01g015410 [Sorghum bicolor]
           gi|241918128|gb|EER91272.1| hypothetical protein
           SORBIDRAFT_01g015410 [Sorghum bicolor]
          Length = 600

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/120 (44%), Positives = 76/120 (63%)
 Frame = -1

Query: 362 AVVVSEFGKEFNVDDVYKTECSFIGTLPSVEEFNHVEVPPSSPPNFDEQMMDEGAVEQNE 183
           AV++++ GKEFN+D++YK E S+IG L S+EEF+H+E+PP++PP  DE+M++EG      
Sbjct: 433 AVIITQDGKEFNIDEIYKAESSYIGGLKSIEEFHHIEIPPNAPPGIDEEMLEEGKKPSEP 492

Query: 182 VTQNDESMARDSKDPEEIKQNTSNRQNDKLYTAEGILDPXXXXXXXXXXXXXKLNSANDM 3
             ++ E    D  D E  K  +++ QNDKLYTAEGILDP             K +  NDM
Sbjct: 493 AQESREEQMSDVNDREGSKAASASTQNDKLYTAEGILDPRKRKAEKKRRKANKFSVLNDM 552


>ref|NP_001043076.1| Os01g0375000 [Oryza sativa Japonica Group]
           gi|54290761|dbj|BAD61382.1| putative nucleostemin [Oryza
           sativa Japonica Group] gi|54290764|dbj|BAD61385.1|
           putative nucleostemin [Oryza sativa Japonica Group]
           gi|113532607|dbj|BAF04990.1| Os01g0375000 [Oryza sativa
           Japonica Group] gi|222618471|gb|EEE54603.1| hypothetical
           protein OsJ_01830 [Oryza sativa Japonica Group]
          Length = 591

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/101 (54%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
 Frame = -1

Query: 362 AVVVSEFGKEFNVDDVYKTECSFIGTLPSVEEFNHVEVPPSSPPNFDEQMMDEGAVEQNE 183
           AV++SE GKEFN+D++YK E S+IG L S+EEF H+E+P ++PP  DE+M+++G  +QNE
Sbjct: 432 AVIISETGKEFNIDEIYKAESSYIGGLKSLEEFRHIEIPSNAPPQIDEEMLEDGK-KQNE 490

Query: 182 VTQ--NDESMARDSKDPEEIKQNTSNRQNDKLYTAEGILDP 66
             Q  +DESM+ D+ + E  K  +++ QNDKLYTAEGILDP
Sbjct: 491 PAQENHDESMS-DANEREGAKTASASTQNDKLYTAEGILDP 530


Top