BLASTX nr result

ID: Dioscorea21_contig00010983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010983
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251...    85   5e-15
ref|XP_002521584.1| r3h domain containing protein, putative [Ric...    84   2e-14
ref|NP_565947.1| Single-stranded nucleic acid binding R3H protei...    83   3e-14
gb|AAM64355.1| unknown [Arabidopsis thaliana]                          83   3e-14
ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14

>ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251643 [Vitis vinifera]
           gi|147820324|emb|CAN73572.1| hypothetical protein
           VITISV_007445 [Vitis vinifera]
           gi|297741684|emb|CBI32816.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +1

Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285
           VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP+Q QFEFQHF
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHF 62


>ref|XP_002521584.1| r3h domain containing protein, putative [Ricinus communis]
           gi|223539262|gb|EEF40855.1| r3h domain containing
           protein, putative [Ricinus communis]
          Length = 349

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +1

Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285
           VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP Q QFEFQHF
Sbjct: 14  VDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHF 55


>ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein [Arabidopsis
           thaliana] gi|20196933|gb|AAB86456.2| expressed protein
           [Arabidopsis thaliana] gi|20197117|gb|AAM14924.1|
           expressed protein [Arabidopsis thaliana]
           gi|330254813|gb|AEC09907.1| Single-stranded nucleic acid
           binding R3H protein [Arabidopsis thaliana]
          Length = 351

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +1

Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285
           VDPFLVEALQNPRHRLT+LRMELD+QRF+Q+P+Q QFEFQHF
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHF 62


>gb|AAM64355.1| unknown [Arabidopsis thaliana]
          Length = 351

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +1

Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285
           VDPFLVEALQNPRHRLT+LRMELD+QRF+Q+P+Q QFEFQHF
Sbjct: 21  VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHF 62


>ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|222853935|gb|EEE91482.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +1

Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285
           VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP+Q  FEFQHF
Sbjct: 19  VDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHF 60


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