BLASTX nr result
ID: Dioscorea21_contig00010983
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00010983 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251... 85 5e-15 ref|XP_002521584.1| r3h domain containing protein, putative [Ric... 84 2e-14 ref|NP_565947.1| Single-stranded nucleic acid binding R3H protei... 83 3e-14 gb|AAM64355.1| unknown [Arabidopsis thaliana] 83 3e-14 ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|2... 82 4e-14 >ref|XP_002283240.1| PREDICTED: uncharacterized protein LOC100251643 [Vitis vinifera] gi|147820324|emb|CAN73572.1| hypothetical protein VITISV_007445 [Vitis vinifera] gi|297741684|emb|CBI32816.3| unnamed protein product [Vitis vinifera] Length = 356 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/42 (90%), Positives = 41/42 (97%) Frame = +1 Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285 VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP+Q QFEFQHF Sbjct: 21 VDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHF 62 >ref|XP_002521584.1| r3h domain containing protein, putative [Ricinus communis] gi|223539262|gb|EEF40855.1| r3h domain containing protein, putative [Ricinus communis] Length = 349 Score = 83.6 bits (205), Expect = 2e-14 Identities = 38/42 (90%), Positives = 40/42 (95%) Frame = +1 Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285 VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP Q QFEFQHF Sbjct: 14 VDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHF 55 >ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana] gi|20196933|gb|AAB86456.2| expressed protein [Arabidopsis thaliana] gi|20197117|gb|AAM14924.1| expressed protein [Arabidopsis thaliana] gi|330254813|gb|AEC09907.1| Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana] Length = 351 Score = 82.8 bits (203), Expect = 3e-14 Identities = 36/42 (85%), Positives = 41/42 (97%) Frame = +1 Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285 VDPFLVEALQNPRHRLT+LRMELD+QRF+Q+P+Q QFEFQHF Sbjct: 21 VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHF 62 >gb|AAM64355.1| unknown [Arabidopsis thaliana] Length = 351 Score = 82.8 bits (203), Expect = 3e-14 Identities = 36/42 (85%), Positives = 41/42 (97%) Frame = +1 Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285 VDPFLVEALQNPRHRLT+LRMELD+QRF+Q+P+Q QFEFQHF Sbjct: 21 VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHF 62 >ref|XP_002307959.1| predicted protein [Populus trichocarpa] gi|222853935|gb|EEE91482.1| predicted protein [Populus trichocarpa] Length = 354 Score = 82.4 bits (202), Expect = 4e-14 Identities = 37/42 (88%), Positives = 40/42 (95%) Frame = +1 Query: 160 VDPFLVEALQNPRHRLTVLRMELDIQRFMQNPEQHQFEFQHF 285 VDPFLVEALQNPRHRLT+LRMELDIQRF+QNP+Q FEFQHF Sbjct: 19 VDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHF 60