BLASTX nr result
ID: Dioscorea21_contig00010982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010982
(343 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi... 132 3e-29
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g... 126 2e-27
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo... 126 2e-27
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays] 119 3e-25
ref|XP_002439788.1| hypothetical protein SORBIDRAFT_09g020050 [S... 119 3e-25
>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 132 bits (332), Expect = 3e-29
Identities = 66/93 (70%), Positives = 74/93 (79%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+D A+ Y RDP K+I SQTALL G A+ RI EAR +FEQ+PDP VVSWNAMI GY
Sbjct: 304 GRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYM 363
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
QNGM+DEAK+LFDRMP RNTISWA MIA AQN
Sbjct: 364 QNGMVDEAKELFDRMPFRNTISWAGMIAGYAQN 396
Score = 82.0 bits (201), Expect = 5e-14
Identities = 37/87 (42%), Positives = 58/87 (66%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
G L+DA + ++ + + T LL+G+A+ R+ +AR VF+ MP+ N V+WNAM++ Y
Sbjct: 78 GMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYV 137
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMI 79
QNG + A++LFD MP R+ SW SM+
Sbjct: 138 QNGDITMARRLFDAMPSRDVTSWNSMV 164
Score = 69.7 bits (169), Expect = 2e-10
Identities = 32/89 (35%), Positives = 54/89 (60%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GR+ DA ++ P + V+ A+++ + QN I AR +F+ MP +V SWN+M+ GY
Sbjct: 108 LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGY 167
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIA 76
+ + +A LF +MP RN ++W MI+
Sbjct: 168 CHSRQMVDAWNLFKQMPQRNLVTWTVMIS 196
Score = 64.3 bits (155), Expect = 1e-08
Identities = 27/94 (28%), Positives = 60/94 (63%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GRL +A ++ P + I++ ++++ + + + +AR +F+ + NV + +++GY
Sbjct: 46 LGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGY 105
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
A+ G + +A+++FD MP RNT++W +M++ QN
Sbjct: 106 ARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQN 139
Score = 58.5 bits (140), Expect = 5e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = -2
Query: 273 ALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTIS 94
AL++ + + + R VF +M + VSWN+ IA QN ML++A+ +FD M R+ +S
Sbjct: 458 ALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVS 517
Query: 93 WASMIAACAQ 64
W ++I+A AQ
Sbjct: 518 WTTIISAYAQ 527
>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|218190072|gb|EEC72499.1| hypothetical protein
OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
Japonica Group]
Length = 922
Score = 126 bits (317), Expect = 2e-27
Identities = 60/93 (64%), Positives = 74/93 (79%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+D A+ YERDP K+I +TAL+ G AQ RI +AR +FEQ+P+P VVSWNA+I GY
Sbjct: 305 GRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYM 364
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
QNGM++EAK+LFD+MP RNTISWA MIA AQN
Sbjct: 365 QNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397
Score = 76.6 bits (187), Expect = 2e-12
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+DDA + +E+ P +VS AL+ G+ QN ++EA+ +F++MP N +SW MIAGYA
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 159 QNGMLDEAKKLFDRM 115
QNG +EA L +
Sbjct: 396 QNGRSEEALGLLQEL 410
Score = 69.3 bits (168), Expect = 3e-10
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
G D A Y+ + + LL+G+ + R+ EAR VF+ M + N V+WNAMI+ Y
Sbjct: 79 GMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV 138
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMI 79
QNG + A++LFD MP R+ SW SM+
Sbjct: 139 QNGDITMARRLFDAMPSRDVSSWNSML 165
Score = 67.4 bits (163), Expect = 1e-09
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GR+ +A ++ + V+ A+++ + QN I AR +F+ MP +V SWN+M+ GY
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIA 76
+ + +A+ LF++MP RN +SW MI+
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMIS 197
Score = 58.9 bits (141), Expect = 4e-07
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = -2
Query: 273 ALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTIS 94
AL+ + + + AR VF +M ++VSWN+ +A QN +LDEA+ FD M R+ +S
Sbjct: 459 ALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVS 518
Query: 93 WASMIAACA 67
W ++I+A A
Sbjct: 519 WTTIISAYA 527
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/94 (26%), Positives = 56/94 (59%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GR+ +A ++ P + I++ ++++ + N AR +++ + N+ + +++GY
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY 106
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
+ G + EA+++FD M RNT++W +MI+ QN
Sbjct: 107 GRLGRVLEARRVFDGMLERNTVAWNAMISCYVQN 140
>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 126 bits (317), Expect = 2e-27
Identities = 60/93 (64%), Positives = 74/93 (79%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+D A+ YERDP K+I +TAL+ G AQ RI +AR +FEQ+P+P VVSWNA+I GY
Sbjct: 305 GRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYM 364
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
QNGM++EAK+LFD+MP RNTISWA MIA AQN
Sbjct: 365 QNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397
Score = 76.6 bits (187), Expect = 2e-12
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+DDA + +E+ P +VS AL+ G+ QN ++EA+ +F++MP N +SW MIAGYA
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 159 QNGMLDEAKKLFDRM 115
QNG +EA L +
Sbjct: 396 QNGRSEEALGLLQEL 410
Score = 69.3 bits (168), Expect = 3e-10
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
G D A Y+ + + LL+G+ + R+ EAR VF+ M + N V+WNAMI+ Y
Sbjct: 79 GMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV 138
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMI 79
QNG + A++LFD MP R+ SW SM+
Sbjct: 139 QNGDITMARRLFDAMPSRDVSSWNSML 165
Score = 67.4 bits (163), Expect = 1e-09
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GR+ +A ++ + V+ A+++ + QN I AR +F+ MP +V SWN+M+ GY
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIA 76
+ + +A+ LF++MP RN +SW MI+
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMIS 197
Score = 58.9 bits (141), Expect = 4e-07
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = -2
Query: 273 ALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTIS 94
AL+ + + + AR VF +M ++VSWN+ +A QN +LDEA+ FD M R+ +S
Sbjct: 459 ALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVS 518
Query: 93 WASMIAACA 67
W ++I+A A
Sbjct: 519 WTTIISAYA 527
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/94 (26%), Positives = 56/94 (59%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GR+ +A ++ P + I++ ++++ + N AR +++ + N+ + +++GY
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY 106
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
+ G + EA+++FD M RNT++W +MI+ QN
Sbjct: 107 GRLGRVLEARRVFDGMLERNTVAWNAMISCYVQN 140
>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 119 bits (298), Expect = 3e-25
Identities = 55/93 (59%), Positives = 73/93 (78%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+DDA Y+RDP K++ S+T++L G A+ RI +A+ +F+Q+ +PNVVSWNAMI GY
Sbjct: 304 GRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYM 363
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
QN M+DEA+ LF+RMP RNTISWA MIA A+N
Sbjct: 364 QNEMVDEAEDLFNRMPFRNTISWAGMIAGYARN 396
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+ DA ++ + V+ A++ + QN I AR +F+ MP +V SWN M+ GY
Sbjct: 109 GRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYC 168
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIA 76
+ +++EA+ LF+RMP RN +SW MI+
Sbjct: 169 HSQLMEEARNLFERMPERNGVSWTVMIS 196
Score = 69.3 bits (168), Expect = 3e-10
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -2
Query: 276 TALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTI 97
T LL+G+A+ R+ +AR VF+ M N V+WNAM+ Y QNG + A+KLFD MP R+
Sbjct: 99 TILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS 158
Query: 96 SWASMI 79
SW +M+
Sbjct: 159 SWNTML 164
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 31/105 (29%)
Frame = -2
Query: 282 SQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLD------------- 142
+Q+A + + R+HEAR VF+ MP ++++WN+MI Y NGM D
Sbjct: 35 AQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGN 94
Query: 141 ------------------EAKKLFDRMPIRNTISWASMIAACAQN 61
+A+++FD M +RNT++W +M+ QN
Sbjct: 95 LRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQN 139
Score = 57.0 bits (136), Expect = 2e-06
Identities = 24/70 (34%), Positives = 44/70 (62%)
Frame = -2
Query: 273 ALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTIS 94
AL+ + + I R +F++M + VS+N+ ++ QN + DEA+ +F+ MP + +S
Sbjct: 458 ALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVS 517
Query: 93 WASMIAACAQ 64
W ++I+ACAQ
Sbjct: 518 WTTIISACAQ 527
>ref|XP_002439788.1| hypothetical protein SORBIDRAFT_09g020050 [Sorghum bicolor]
gi|241945073|gb|EES18218.1| hypothetical protein
SORBIDRAFT_09g020050 [Sorghum bicolor]
Length = 551
Score = 119 bits (297), Expect = 3e-25
Identities = 53/88 (60%), Positives = 71/88 (80%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+DDA Y+RDP K++ S+TA+L G + RI +A+ +F+Q+P+PNVVSWNAMI GY
Sbjct: 291 GRIDDAFAVYQRDPLKSVPSRTAMLTGLGRYGRISDAKILFDQIPEPNVVSWNAMITGYM 350
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIA 76
QN M+DEA+++F+RMP RNTISWA MIA
Sbjct: 351 QNEMVDEAEEIFNRMPFRNTISWAGMIA 378
Score = 69.7 bits (169), Expect = 2e-10
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = -2
Query: 276 TALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYAQNGMLDEAKKLFDRMPIRNTI 97
T LL+G+A+ R+ +AR VF++M N V+WNAM+ Y QNG + A+K+F+ MP RN
Sbjct: 96 TILLSGYARAGRVRDARRVFDEMVVRNTVAWNAMVTCYVQNGDIALARKMFNAMPSRNVS 155
Query: 96 SWASMI 79
SW +M+
Sbjct: 156 SWNTML 161
Score = 68.9 bits (167), Expect = 4e-10
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = -2
Query: 339 GRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGYA 160
GR+ DA ++ + V+ A++ + QN I AR +F MP NV SWN M+ GY
Sbjct: 106 GRVRDARRVFDEMVVRNTVAWNAMVTCYVQNGDIALARKMFNAMPSRNVSSWNTMLTGYC 165
Query: 159 QNGMLDEAKKLFDRMPIRNTISWASMIA 76
+ ++ +A+ LF+ MP RN +SW MI+
Sbjct: 166 HSQLMVDARNLFELMPERNMVSWTVMIS 193
Score = 58.9 bits (141), Expect = 4e-07
Identities = 25/94 (26%), Positives = 55/94 (58%)
Frame = -2
Query: 342 VGRLDDALLFYERDPSKTIVSQTALLAGFAQNDRIHEARHVFEQMPDPNVVSWNAMIAGY 163
+GRL +A ++ P + I++ +++ + N AR + + + N+ + +++GY
Sbjct: 43 LGRLREAREVFDAMPFRDIIAWNSMILAYCSNRMPDSARSLADAISGGNLRTGTILLSGY 102
Query: 162 AQNGMLDEAKKLFDRMPIRNTISWASMIAACAQN 61
A+ G + +A+++FD M +RNT++W +M+ QN
Sbjct: 103 ARAGRVRDARRVFDEMVVRNTVAWNAMVTCYVQN 136