BLASTX nr result

ID: Dioscorea21_contig00010976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010976
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053775.2| Os04g0602700 [Oryza sativa Japonica Group] g...   318   7e-85
tpg|DAA36168.1| TPA: nucleic acid binding protein [Zea mays]          314   2e-83
ref|NP_001148410.1| nucleic acid binding protein [Zea mays] gi|1...   314   2e-83
ref|XP_002448465.1| hypothetical protein SORBIDRAFT_06g027580 [S...   313   2e-83
ref|XP_003580453.1| PREDICTED: alkylated DNA repair protein alkB...   312   5e-83

>ref|NP_001053775.2| Os04g0602700 [Oryza sativa Japonica Group]
           gi|38344149|emb|CAD41869.2| OSJNBa0041A02.16 [Oryza
           sativa Japonica Group] gi|116310931|emb|CAH67869.1|
           B0403H10-OSIGBa0105A11.21 [Oryza sativa Indica Group]
           gi|125549609|gb|EAY95431.1| hypothetical protein
           OsI_17273 [Oryza sativa Indica Group]
           gi|125591534|gb|EAZ31884.1| hypothetical protein
           OsJ_16049 [Oryza sativa Japonica Group]
           gi|255675751|dbj|BAF15689.2| Os04g0602700 [Oryza sativa
           Japonica Group]
          Length = 348

 Score =  318 bits (816), Expect = 7e-85
 Identities = 158/227 (69%), Positives = 180/227 (79%), Gaps = 6/227 (2%)
 Frame = +2

Query: 2   ELAIPGIYLVHDFITPXXXXXXXXXXDASPWKSLAKRRVQHYGYEFLYETRNVDARQYLG 181
           EL +PGIYLV DF+T           D  PWKSLAKRRVQHYG+EFLYETRNVD++Q+LG
Sbjct: 122 ELGVPGIYLVPDFVTAAEEQELLAAVDNRPWKSLAKRRVQHYGFEFLYETRNVDSKQFLG 181

Query: 182 NLPSFVSFVLDKISSFPEPANNKC--RLMDQLTVNEYPSGVGLSPHIDTHSAFDELIFSL 355
            LP FVS ++DKI SFP    NKC  +L+DQLTVNEYP GVGLSPHIDTHSAF+E+IFSL
Sbjct: 182 ELPPFVSKIIDKIMSFP--GANKCTSKLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSL 239

Query: 356 SIAGPCIMEFRKYPQGTWYPP---GGTVAD-VEGVNFIRKAIYLPPRSMLLMSGEGRYAW 523
           S+AGPCIMEFRKYP+G+W  P    GT  D +E    IRKA++LPPRSMLLMSGEGRYAW
Sbjct: 240 SLAGPCIMEFRKYPKGSWRAPSMVSGTDKDSIEEPQCIRKAVFLPPRSMLLMSGEGRYAW 299

Query: 524 HHYIPHHKVDVVKGQSIKRSSRRVSFTFRKVRRGPCRCEFQQCCDSQ 664
           HHYIPHHK+D V GQ IKR++RRVSFTFRKVR G C CE+ Q CDSQ
Sbjct: 300 HHYIPHHKIDDVGGQVIKRNTRRVSFTFRKVRMGLCDCEYGQFCDSQ 346


>tpg|DAA36168.1| TPA: nucleic acid binding protein [Zea mays]
          Length = 536

 Score =  314 bits (804), Expect = 2e-83
 Identities = 154/228 (67%), Positives = 179/228 (78%), Gaps = 8/228 (3%)
 Frame = +2

Query: 2   ELAIPGIYLVHDFITPXXXXXXXXXXDASPWKSLAKRRVQHYGYEFLYETRNVDARQYLG 181
           EL IPGIY+V +F+T           D+  WK LAKRRVQHYGYEFLYETRNVD++Q+LG
Sbjct: 308 ELGIPGIYMVQEFVTAAEEQELLSAVDSKTWKRLAKRRVQHYGYEFLYETRNVDSKQFLG 367

Query: 182 NLPSFVSFVLDKISSFPEPANNKCRLMDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSI 361
            LP+FVS VL+KI+SFP   +   RL+DQLTVNEYP GVGLSPHIDTHSAF+E+IFSLS+
Sbjct: 368 ELPTFVSTVLEKIASFPGVKDCATRLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSL 427

Query: 362 AGPCIMEFRKYPQGTWYPPGGTVADVEGVN--------FIRKAIYLPPRSMLLMSGEGRY 517
           AG CIMEFRKY +GTW  P    + V+GV+         IRKAI+LPPRSMLLMSGEGRY
Sbjct: 428 AGTCIMEFRKYTKGTWRAP----SVVDGVDEDSSQEPECIRKAIFLPPRSMLLMSGEGRY 483

Query: 518 AWHHYIPHHKVDVVKGQSIKRSSRRVSFTFRKVRRGPCRCEFQQCCDS 661
           AWHHYIPHHK+D V GQ IKR+SRRVSFTFRKVR GPC CE++Q CD+
Sbjct: 484 AWHHYIPHHKIDAVGGQVIKRNSRRVSFTFRKVRMGPCDCEYKQFCDA 531


>ref|NP_001148410.1| nucleic acid binding protein [Zea mays] gi|195619080|gb|ACG31370.1|
           nucleic acid binding protein [Zea mays]
          Length = 349

 Score =  314 bits (804), Expect = 2e-83
 Identities = 154/228 (67%), Positives = 179/228 (78%), Gaps = 8/228 (3%)
 Frame = +2

Query: 2   ELAIPGIYLVHDFITPXXXXXXXXXXDASPWKSLAKRRVQHYGYEFLYETRNVDARQYLG 181
           EL IPGIY+V +F+T           D+  WK LAKRRVQHYGYEFLYETRNVD++Q+LG
Sbjct: 121 ELGIPGIYMVQEFVTAAEEQELLSAVDSKTWKRLAKRRVQHYGYEFLYETRNVDSKQFLG 180

Query: 182 NLPSFVSFVLDKISSFPEPANNKCRLMDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSI 361
            LP+FVS VL+KI+SFP   +   RL+DQLTVNEYP GVGLSPHIDTHSAF+E+IFSLS+
Sbjct: 181 ELPTFVSTVLEKIASFPGVKDCATRLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSL 240

Query: 362 AGPCIMEFRKYPQGTWYPPGGTVADVEGVN--------FIRKAIYLPPRSMLLMSGEGRY 517
           AG CIMEFRKY +GTW  P    + V+GV+         IRKAI+LPPRSMLLMSGEGRY
Sbjct: 241 AGTCIMEFRKYTKGTWRAP----SVVDGVDEDSSQEPECIRKAIFLPPRSMLLMSGEGRY 296

Query: 518 AWHHYIPHHKVDVVKGQSIKRSSRRVSFTFRKVRRGPCRCEFQQCCDS 661
           AWHHYIPHHK+D V GQ IKR+SRRVSFTFRKVR GPC CE++Q CD+
Sbjct: 297 AWHHYIPHHKIDAVGGQVIKRNSRRVSFTFRKVRMGPCDCEYKQFCDA 344


>ref|XP_002448465.1| hypothetical protein SORBIDRAFT_06g027580 [Sorghum bicolor]
           gi|241939648|gb|EES12793.1| hypothetical protein
           SORBIDRAFT_06g027580 [Sorghum bicolor]
          Length = 349

 Score =  313 bits (803), Expect = 2e-83
 Identities = 152/224 (67%), Positives = 175/224 (78%), Gaps = 4/224 (1%)
 Frame = +2

Query: 2   ELAIPGIYLVHDFITPXXXXXXXXXXDASPWKSLAKRRVQHYGYEFLYETRNVDARQYLG 181
           EL IPGIY+V +F+T           D+  WK LAKRRVQHYGYEFLYETRNVD++Q+LG
Sbjct: 121 ELGIPGIYMVQEFVTAAEEQELLSAVDSKTWKRLAKRRVQHYGYEFLYETRNVDSKQFLG 180

Query: 182 NLPSFVSFVLDKISSFPEPANNKCRLMDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSI 361
            LP+FVS VL+KI+SFP   +    L+DQLTVNEYP GVGLSPHIDTHSAF+E+IFSLS+
Sbjct: 181 ELPTFVSTVLEKIASFPGVKDCTTSLVDQLTVNEYPCGVGLSPHIDTHSAFEEMIFSLSL 240

Query: 362 AGPCIMEFRKYPQGTWYPP----GGTVADVEGVNFIRKAIYLPPRSMLLMSGEGRYAWHH 529
           AGPCIMEFRKY +G+W  P    G      +    IRKAI+LPPRSMLLMSGEGRYAWHH
Sbjct: 241 AGPCIMEFRKYTKGSWRAPSVVNGVDEDSSQEPGCIRKAIFLPPRSMLLMSGEGRYAWHH 300

Query: 530 YIPHHKVDVVKGQSIKRSSRRVSFTFRKVRRGPCRCEFQQCCDS 661
           YIPHHK+D V GQ IKR+SRRVSFTFRKVR GPC CE++Q CDS
Sbjct: 301 YIPHHKIDAVGGQVIKRNSRRVSFTFRKVRMGPCDCEYKQFCDS 344


>ref|XP_003580453.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Brachypodium distachyon]
          Length = 349

 Score =  312 bits (800), Expect = 5e-83
 Identities = 151/226 (66%), Positives = 175/226 (77%), Gaps = 5/226 (2%)
 Frame = +2

Query: 2   ELAIPGIYLVHDFITPXXXXXXXXXXDASPWKSLAKRRVQHYGYEFLYETRNVDARQYLG 181
           EL IPG++LV +F+T           D+ PWK LAKRRVQHYGYEFLYETRNVD++Q+LG
Sbjct: 122 ELGIPGVHLVQEFVTAAEEQELLAAVDSRPWKRLAKRRVQHYGYEFLYETRNVDSKQFLG 181

Query: 182 NLPSFVSFVLDKISSFPEPANNKCRLMDQLTVNEYPSGVGLSPHIDTHSAFDELIFSLSI 361
            LPSFVS VLDKI +FP   N   +L+DQLTVNEYP GVGLSPHIDTHSAF+E+I SLS+
Sbjct: 182 ELPSFVSKVLDKIGAFPGVKNCTSKLVDQLTVNEYPCGVGLSPHIDTHSAFEEMILSLSL 241

Query: 362 AGPCIMEFRKYPQGTWYPP-----GGTVADVEGVNFIRKAIYLPPRSMLLMSGEGRYAWH 526
           AG CIMEFR+YP+G+W  P     G     ++    IRKAI+LPPRSMLLMSGEGRYAWH
Sbjct: 242 AGSCIMEFRQYPKGSWRAPPSIGNGTDEVSIQDPQCIRKAIFLPPRSMLLMSGEGRYAWH 301

Query: 527 HYIPHHKVDVVKGQSIKRSSRRVSFTFRKVRRGPCRCEFQQCCDSQ 664
           HYIPHHK+D V GQ IKR+SRRVSFTFRKVR   C CE++Q CDSQ
Sbjct: 302 HYIPHHKIDDVAGQVIKRNSRRVSFTFRKVRMDLCDCEYRQFCDSQ 347


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