BLASTX nr result

ID: Dioscorea21_contig00010975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010975
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303092.1| extra response regulator [Populus trichocarp...    66   3e-09
ref|XP_002313833.1| extra response regulator [Populus trichocarp...    65   7e-09
ref|XP_003628696.1| Two-component response regulator ARR22 [Medi...    63   3e-08
ref|YP_006193702.1| protein DhkJ2 [Paenibacillus mucilaginosus K...    62   4e-08
ref|YP_005316759.1| protein DhkJ2 [Paenibacillus mucilaginosus 3...    62   4e-08

>ref|XP_002303092.1| extra response regulator [Populus trichocarpa]
           gi|222844818|gb|EEE82365.1| extra response regulator
           [Populus trichocarpa]
          Length = 138

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
 Frame = -3

Query: 261 IFEDFGVESLVANNGEEALGIMLERPMLNLIITDKDMPEMNGIQ------AFSLSTMIVG 100
           + E  G+E+ VA NG+EA+ I       +LI+ D+DMP MNGI+      A  + +MI G
Sbjct: 33  LLEQLGIENQVARNGKEAIDIHCSGKKFDLILMDRDMPIMNGIEATRKLRAMGIRSMIAG 92

Query: 99  ISADTEREVEPEFLDAGVGEFIPKPVQMEKLIS 1
           +S    ++   EF++AG+ ++  KP+   K+IS
Sbjct: 93  VSTRCVKQEIQEFMEAGLDDYQEKPLTSAKIIS 125


>ref|XP_002313833.1| extra response regulator [Populus trichocarpa]
           gi|222850241|gb|EEE87788.1| extra response regulator
           [Populus trichocarpa]
          Length = 129

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
 Frame = -3

Query: 261 IFEDFGVESLVANNGEEALGIMLERPMLNLIITDKDMPEMNGIQ------AFSLSTMIVG 100
           +    G+E+ VA NGEEA+ +       +LI+ D+DMP MNGI+      A  + ++IVG
Sbjct: 28  LLSKLGIENQVAANGEEAVDLHCSGKKFDLIVMDRDMPIMNGIEATRELRALGIRSIIVG 87

Query: 99  ISADTEREVEPEFLDAGVGEFIPKPVQMEKLIS 1
           +S  +  +   EF+DAG+ ++  KP+   K+IS
Sbjct: 88  VSTRSLEQEIQEFMDAGLDDYQEKPLTSSKVIS 120


>ref|XP_003628696.1| Two-component response regulator ARR22 [Medicago truncatula]
           gi|355522718|gb|AET03172.1| Two-component response
           regulator ARR22 [Medicago truncatula]
          Length = 144

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
 Frame = -3

Query: 252 DFGVESLVANNGEEALGIMLERPMLNLIITDKDMPEMNGIQA------FSLSTMIVGISA 91
           + GV +    NG+EA+ I       +LI+ DKDMPEMNG +A        +S+ IVG+S+
Sbjct: 33  NLGVNNTCVKNGKEAVEIHQYGKKFDLILMDKDMPEMNGTEATKQLRLMGISSTIVGVSS 92

Query: 90  DT--EREVEPEFLDAGVGEFIPKPVQMEKLIS 1
            +  E+E+  +F++AG+ E++ KP+   KL S
Sbjct: 93  HSMEEKEIVVKFMEAGLDEYLEKPLDKAKLNS 124


>ref|YP_006193702.1| protein DhkJ2 [Paenibacillus mucilaginosus K02]
            gi|384094501|gb|AFH65937.1| protein DhkJ2 [Paenibacillus
            mucilaginosus K02]
          Length = 1036

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
 Frame = -3

Query: 264  DIFEDFGVESLVANNGEEALGIMLERPMLNLIITDKDMPEMNGIQAF-SLSTM------- 109
            +I E +G+  L A+NG+EAL ++   P ++L++ D  MPEM+G QA  S+  +       
Sbjct: 931  NILEKYGINVLFADNGKEALELLEGHPRIDLVLMDIMMPEMDGYQAIRSIRALPRYRQLP 990

Query: 108  IVGISADTEREVEPEFLDAGVGEFIPKPVQMEKLIS 1
            I+ +SA   +E     +DAG  +++ KPV + KL++
Sbjct: 991  IIALSAKAMKEDRQRCMDAGASDYLSKPVDVRKLVT 1026


>ref|YP_005316759.1| protein DhkJ2 [Paenibacillus mucilaginosus 3016]
            gi|378573300|gb|AFC33610.1| DhkJ2 [Paenibacillus
            mucilaginosus 3016]
          Length = 1036

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
 Frame = -3

Query: 264  DIFEDFGVESLVANNGEEALGIMLERPMLNLIITDKDMPEMNGIQAF-SLSTM------- 109
            +I E +G+  L A+NG+EAL ++   P ++L++ D  MPEM+G QA  S+  +       
Sbjct: 931  NILEKYGINVLFADNGKEALELLEGHPRIDLVLMDIMMPEMDGYQAIRSIRALPRYRQLP 990

Query: 108  IVGISADTEREVEPEFLDAGVGEFIPKPVQMEKLIS 1
            I+ +SA   +E     +DAG  +++ KPV + KL++
Sbjct: 991  IIALSAKAMKEDRQRCMDAGASDYLSKPVDVRKLVT 1026


Top