BLASTX nr result

ID: Dioscorea21_contig00010952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010952
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP65723.1| R2R3 MYB, partial [Iris fulva]                         233   5e-59
gb|AFP65715.1| R2R3 MYB [Iris fulva]                                  228   1e-57
emb|CAN75641.1| hypothetical protein VITISV_029178 [Vitis vinifera]   223   7e-56
gb|ACJ38663.1| myb-like transcription factor [Betula luminifera]      206   7e-51
ref|XP_002320929.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41

>gb|AFP65723.1| R2R3 MYB, partial [Iris fulva]
          Length = 353

 Score =  233 bits (594), Expect = 5e-59
 Identities = 159/337 (47%), Positives = 191/337 (56%), Gaps = 37/337 (10%)
 Frame = -3

Query: 991 GKSCRLRWINYLRPDLKRGTFSEQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 812
           GKSCRLRWINYLRPDLKRGTFS+QEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN
Sbjct: 26  GKSCRLRWINYLRPDLKRGTFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 85

Query: 811 SCIKKKLKQRGIDPVTHKPFLSETEGG----TAAGEDHNKPTAATNINDKPKLLSP---- 656
           SCIKKKL+Q GIDP THKP LSE + G    T A E    P        K   ++P    
Sbjct: 86  SCIKKKLRQSGIDPNTHKP-LSEPDAGQELQTPAAETDKAPVPEPPPGGKLNRIAPTKDF 144

Query: 655 ----ASAMTTTCTTSY--LPPLEL-------MNHNQSAPSAFLWFNSXXXXXXXXQELNC 515
               +SA     +  Y  LP L         ++ NQ+ P   LWFN          +L  
Sbjct: 145 FLDRSSADRVAGSVGYFNLPQLTYSPDGSVGLSMNQTQP---LWFNQ---NPKFDVDLLS 198

Query: 514 NTGSFMSATPSMGGTK---------SVMHGVQYWEG-----XXXXXXXXXSGIELQSNGS 377
             GS +S  P+  G K         + M G QYW+G              +GIELQSN S
Sbjct: 199 APGS-VSVLPASTGLKLMTSNLPADNSMLGFQYWDGGNSSNNSSTSANSGNGIELQSNSS 257

Query: 376 LIESGGIFSWSDLTSDSEA-QIHLDGEPEDLKWSEYLQGSFPVSAALRGHEGQPLFDIKA 200
           L +S G+F WSD+ SD EA QI+L GEPEDLKWSEY+ GS         ++GQ ++    
Sbjct: 258 LFDS-GMFRWSDMGSDKEAHQINLHGEPEDLKWSEYINGSVT-------NQGQTMYGGIK 309

Query: 199 ENHLLAMDDGISASWHQN-YQQEQQTSCHPYGKHFWR 92
           E  +    DG++  W QN +QQ    +   YGK  ++
Sbjct: 310 ELEVQLGIDGLNI-WPQNQHQQHLHAASDFYGKELFQ 345


>gb|AFP65715.1| R2R3 MYB [Iris fulva]
          Length = 404

 Score =  228 bits (582), Expect = 1e-57
 Identities = 147/332 (44%), Positives = 178/332 (53%), Gaps = 66/332 (19%)
 Frame = -3

Query: 991  GKSCRLRWINYLRPDLKRGTFSEQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 812
            GKSCRLRWINYLRPDLKRGTFS QEEN+IIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN
Sbjct: 50   GKSCRLRWINYLRPDLKRGTFSMQEENMIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 109

Query: 811  SCIKKKLKQRGIDPVTHKPFLSETEGG----------TAAGEDHNKPTAATNINDKPKLL 662
            SCIKKKL+QRGIDP THKP L+E EGG          T+ G    K  A       P L 
Sbjct: 110  SCIKKKLRQRGIDPNTHKP-LAEGEGGDDKAPTNSGKTSGGSSDLKLLALPPSATPPSLA 168

Query: 661  SPASAMTTTCTTSYLPPLELM------NHNQS---------------------------- 584
             P ++  ++ +    P  E        NH  S                            
Sbjct: 169  LPETSFPSSSSNPTAPTKEFFLDRFFTNHESSSSCRPSNSMGLFSLPQLSPGREAATGLS 228

Query: 583  -APSAFLWFNSXXXXXXXXQELNCNTGSFMSATPSMGGT-KSVMHGVQ------------ 446
             +P+  LWFN          E NCN  S  +  PS+  +  S   G++            
Sbjct: 229  VSPNPLLWFNQSSRLFDMNPEYNCNAMS--TVIPSVSSSVLSTSMGLKTAINLPPDNPPP 286

Query: 445  --YWE-----GXXXXXXXXXSGIELQSNGSLIESGGIFSWSDLTSDSEAQIHLDGEPEDL 287
              YWE               +GIEL S+    + GG++ W D+T D E Q+H   EPEDL
Sbjct: 287  ECYWEAGNISSSSRSSGTSGNGIELPSSNYSYD-GGMYPWLDMTQDKETQLH--QEPEDL 343

Query: 286  KWSEYLQGSFPVSAALRGHEGQPLF-DIKAEN 194
            +WSEYL G+FP+SAAL+ ++ QPL+ D+K EN
Sbjct: 344  RWSEYLNGAFPISAALQ-NQSQPLYGDVKDEN 374


>emb|CAN75641.1| hypothetical protein VITISV_029178 [Vitis vinifera]
          Length = 380

 Score =  223 bits (567), Expect = 7e-56
 Identities = 149/325 (45%), Positives = 181/325 (55%), Gaps = 38/325 (11%)
 Frame = -3

Query: 991 GKSCRLRWINYLRPDLKRGTFSEQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 812
           GKSCRLRWINYLRPDLKRGTFS QEENLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWN
Sbjct: 50  GKSCRLRWINYLRPDLKRGTFSLQEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWN 109

Query: 811 SCIKKKLKQRGIDPVTHKPFLSETEGGTAAGEDHNKPT-AATNINDKPKLLSPASAMTTT 635
           SC+KKKL+QRGIDP THKP LSE E      ED N PT +    +     L P      +
Sbjct: 110 SCLKKKLRQRGIDPNTHKP-LSEVEN----REDSNPPTDSQDKASGVSSELKPPQGCQPS 164

Query: 634 CTTSYLPPLELMNHNQSA-----PSAFLWFNSXXXXXXXXQELNCNTGS----------- 503
               YL P +L N+  +A     P+  LWF+          E + N  S           
Sbjct: 165 DVVGYLAPQQL-NYPSNARLSINPTQPLWFSQSSKTLDMNSEFSSNAVSSVLSSVTSSLL 223

Query: 502 -----------FMSATPSMGGTKSVMHGVQYWE-GXXXXXXXXXSG----IELQSNGSLI 371
                      F S  PS+      + G ++W+ G         SG     ELQSN S  
Sbjct: 224 PSPMPYKPSIPFHSDNPSI--PSFTLSGSRFWDAGASTNSSNSSSGSSSSAELQSNSSFF 281

Query: 370 ESGGIFSW---SDLTSDSEAQIH-LDGEPEDLKWSEYLQGSFPVSAALRGHEGQPLF-DI 206
           E+  IF W      TSD  AQIH ++ E ED+KW EYLQ  F ++AAL+    QPL+ +I
Sbjct: 282 EN-SIFPWGLADCSTSDKGAQIHIIESEQEDIKWPEYLQNPFLMAAALQNQTPQPLYNEI 340

Query: 205 KAENHLLAMDDGISASWHQNYQQEQ 131
           K+E H +   +  SA W  + QQ++
Sbjct: 341 KSETHFIT--ETSSAMWAHSQQQQE 363


>gb|ACJ38663.1| myb-like transcription factor [Betula luminifera]
          Length = 395

 Score =  206 bits (524), Expect = 7e-51
 Identities = 140/337 (41%), Positives = 181/337 (53%), Gaps = 52/337 (15%)
 Frame = -3

Query: 991  GKSCRLRWINYLRPDLKRGTFSEQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 812
            GKSCRLRWINYLRPDLKRGTFS++EENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN
Sbjct: 50   GKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 109

Query: 811  SCIKKKLKQRGIDPVTHKPFLSETEGG--------------TAAGEDHNKPTAATNINDK 674
            SC+KKKL+QRGIDPVTHKP +SE E G              +    + N   A ++  + 
Sbjct: 110  SCLKKKLRQRGIDPVTHKP-ISEVENGEEDKDTEAKSKDKMSVVSNELNLLKAESSRQES 168

Query: 673  P-------------KLLSPAS--------AMTTTCTTSYLP---PLELMNHNQSAPSA-- 572
            P              L++P +          TT C  S L    PL+ +N+  +A ++  
Sbjct: 169  PIAAQGYPLEVQGNNLMTPTANNDFLHQDTSTTNCQPSELVGHFPLQQLNYASNATNSNP 228

Query: 571  FLWFNSXXXXXXXXQELNCNTGSFMSATPSM-------GGTKSVMHGVQYWEGXXXXXXX 413
              WF           E      + +   PS+         +   ++G +YWEG       
Sbjct: 229  TQWFTQSGKSFDMNSEFASMLPNSIGYKPSLTFPADNVSMSSFTVNGSRYWEGSGAAAAT 288

Query: 412  XXSGIELQSNGSLIESGGIFSWSDL---TSDSEAQIHLDGEPEDLKWSEYLQGSFPVSAA 242
              +     S+ SL+E+  +FSW      TSD E Q HL    ED+KW+EY      ++AA
Sbjct: 289  NSN--SGSSSSSLLEN-SMFSWGLADCGTSDKETQTHL---TEDIKWAEYFNNPLLMAAA 342

Query: 241  LRGHEGQPLF-DIKAENHLLAMDDGISASW-HQNYQQ 137
            L+    Q L+ +IK+E HL+  D   +A W H N QQ
Sbjct: 343  LQNQTPQCLYNEIKSETHLVT-DTTSTAMWAHHNKQQ 378


>ref|XP_002320929.1| predicted protein [Populus trichocarpa] gi|222861702|gb|EEE99244.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  176 bits (445), Expect = 1e-41
 Identities = 89/111 (80%), Positives = 94/111 (84%)
 Frame = -3

Query: 991 GKSCRLRWINYLRPDLKRGTFSEQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 812
           GKSCRLRWINYLRPDLKRGTFS+QEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN
Sbjct: 50  GKSCRLRWINYLRPDLKRGTFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 109

Query: 811 SCIKKKLKQRGIDPVTHKPFLSETEGGTAAGEDHNKPTAATNINDKPKLLS 659
           SC+KKKL+QRGIDPVTHKP LSE E     GED N P + T   DK   +S
Sbjct: 110 SCLKKKLRQRGIDPVTHKP-LSEVEN----GEDKNPPASGT--QDKASAVS 153



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 65/206 (31%), Positives = 90/206 (43%), Gaps = 6/206 (2%)
 Frame = -3

Query: 730 TAAGEDHNKPTAATNINDKPKLLSPASAMTTTCTT-SYLPPLELMNHNQSAPSAFLWFNS 554
           T+   D N   ++T I   P +L PA   +   T+ SY P + +   N S PS     NS
Sbjct: 274 TSKAFDMNSEFSSTAI---PSILPPAVTSSFHSTSMSYKPSITVSPDNPSLPS--FTTNS 328

Query: 553 XXXXXXXXQELNCNTGSFMSATPSMGGTKSVMHGVQYWEGXXXXXXXXXSGIELQSNGSL 374
                      N N     S T S G T                        ELQSN S 
Sbjct: 329 CRLWETGTPRSNSN-----SNTVSNGST------------------------ELQSNSSF 359

Query: 373 IESGGIFSWS---DLTSDSEAQIHLDG-EPEDLKWSEYLQGSFPVSAALRGHEGQPLF-D 209
            E+  IFSW      +++ EAQ HL G + ED+KW EYLQ    ++AAL+    Q L+ +
Sbjct: 360 FENA-IFSWGLGECGSAEKEAQNHLMGSQHEDIKWPEYLQNPLLMAAALQNQNQQSLYNE 418

Query: 208 IKAENHLLAMDDGISASWHQNYQQEQ 131
           IK+E  ++   +  S  W  N+QQ+Q
Sbjct: 419 IKSETQVVT--ENSSGMWPHNHQQQQ 442


Top