BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010859
         (3418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1483   0.0  
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...  1483   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1467   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1461   0.0  
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...  1456   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 739/1090 (67%), Positives = 869/1090 (79%), Gaps = 4/1090 (0%)
 Frame = -3

Query: 3260 AKPDYSALRELVHPHIDSFDYFLDEGLEKAVTSIRPVELSDPVSGSKIRISFGKPYVNAP 3081
            A PDY  LREL   HIDSFD+ ++ GLE  + S++P                        
Sbjct: 4    AGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP------------------------ 39

Query: 3080 MKEGRLKSSLYPHQCREAGLSYKGEFKVELNLQFDNKAVVRDHISFGQLPIMLRSKLCHL 2901
                 ++ +LYP +CR+A +SY G+   ++  Q+ N   +R+  + GQ PIML+SKLCHL
Sbjct: 40   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHL 99

Query: 2900 RGASPEELIFHKEEATEMGGYFICNGLERLARLLIVPKRNYPIGMVRKSFRGRGDGYTSK 2721
            RGA P++L+  KEE++EMGGYFI NGLER+ RLLI+PKRNYP+ MVR SFR R +GYT K
Sbjct: 100  RGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDK 159

Query: 2720 GVVIRCVREDQSSVTIKLYYLQNGSARIGFWIRGREVLLPVGIILKALIDTNDHEIFLSL 2541
             VVIRCVREDQS+VT+KLYYL+NGSAR+GFWI+GRE LLPVG++LKALIDT DHEI+ SL
Sbjct: 160  AVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESL 219

Query: 2540 TSCYNEKYQRQKGAVGTQLAGERAQIILDEVRALSLLTHSQCLEHIGEFFQPAIYGFXXX 2361
            T CY+EKY+  KGAVGTQL GER +IILDEVR LSL T  QCL+HIGE FQ  + G    
Sbjct: 220  TCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENE 279

Query: 2360 XXXXXXXXVLRDYIFVHLANNYDKFNLLIFMLQKLFALVDQTAAPDNPDALQNQEVLLPG 2181
                    VLR+YIFVHL NNYDKFNLLIFM+QKLF+L+DQT+ PDNPD LQNQEVLLPG
Sbjct: 280  SYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPG 339

Query: 2180 HLITLYVKEKLEEWLHKSIRDIKDEMSKNPAEFEFNKL-DAKKI--SRNSQSIGRAVESM 2010
            HLIT+Y+KEKL+EWL+K+ R ++DE++K    FEF+ L   KK+     S+ I  AVE+M
Sbjct: 340  HLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLAVENM 398

Query: 2009 IRIGKVATRSTLDLPQKDGMTIQAERLNFLRFISHFCAVHRGAAFAKMRTTSVRKLLPES 1830
            ++ G++ T+S LDL Q+ GMT+QAERLNFLRF+SHF AVHRGA+FA +RTTSVRKLLPE+
Sbjct: 399  LKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEA 458

Query: 1829 WGFLCPVHTPDGEPCGLLNHMASSCRVTSFYDSDGKIKDFLKIRMTILTVLVGMGMASSL 1650
            WGFLCPVHTPDGEPCGLLNHMAS+CR+TS++DS G  +DF KIRM+IL+VL+G+GM  +L
Sbjct: 459  WGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPAL 518

Query: 1649 PKLEQAGPPEVLHVLLDGCVVGSISSSNIEDAVGHLRRLKLSASSGFPADLEVGHVPLSL 1470
            PKL QAGPPEVL V+LDG VVGSI SS +E AV HLRRLK+SA S  P DLEVG++PLS+
Sbjct: 519  PKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSM 578

Query: 1469 GGAYPGLYLFTSPSRFVRPVRNIYQLSDVNHCVELIGPFEQAFMEIKCPDGGEGGRREGF 1290
            GGAYPGLYLFTSPSRFVRPVRNI   S+  H +ELIGPFEQ +MEI+CPDG +GGRR  F
Sbjct: 579  GGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIF 638

Query: 1289 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAIGKRADVKLYHL 1110
            PATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM FS+QAI  RAD KLYHL
Sbjct: 639  PATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHL 698

Query: 1109 QTPQSPIVRTSSYSKYCIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLCRGQIY 930
            QTPQ+PIVRTS+Y KY +DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RGLC GQIY
Sbjct: 699  QTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIY 758

Query: 929  QTETVDLTKKHDKSTRVVEIFAR-XXXXXXXXXXXXDGLPYVGQKVQPNDPYYSSYNTLT 753
            QTET+DL+ +++KS R   +F R             DGLPYVGQ + PN+PY S YN +T
Sbjct: 759  QTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVT 818

Query: 752  SDIKPTNMKSSEPAIIDFVSIDGTNLKNGIQKANIRFRRPRNPVIGDKFSSRHGQKGVCS 573
            S  + T +K SEP I+D+V++D  N K+  QK NIRFRRPRNP+IGDKFSSRHGQKGVCS
Sbjct: 819  SSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRNPIIGDKFSSRHGQKGVCS 877

Query: 572  QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESVAAKGGCLKGQFMDATPFSNS 393
            QLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLESVAAKGG L G+F+DATPFS+S
Sbjct: 878  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS 937

Query: 392  VNKADDNTSFESSSLVDELGPMLTSYGFNYHGVEVLYSGVFGTEMTCEIFIGPVYYQRLR 213
            + KA+     ESSSLVDELG MLTSYGFNYHGVEVLYSG +GTE+TCEIFIGPVYYQRLR
Sbjct: 938  LRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLR 997

Query: 212  HMVSDKFQVRSTGVVDQVTRQPXXXXXXXXXXXXGEMERDSLLAHGAAYLLHDRLHSSSD 33
            HMVSDKFQVRSTG VDQVTRQP            GEMERDS+LAHGAAYLLHDRLH+ SD
Sbjct: 998  HMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSD 1057

Query: 32   YHIAEVCSIC 3
            +HIA+VCS+C
Sbjct: 1058 HHIADVCSLC 1067


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
            distachyon]
          Length = 1181

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 728/1085 (67%), Positives = 878/1085 (80%), Gaps = 2/1085 (0%)
 Frame = -3

Query: 3251 DYSALRELVHPHIDSFDYFLDEGLEKAVTSIRPVELSDPVSGSKIRISFGKPYVNAPMKE 3072
            +Y+ LREL  PHI+SFDYFLDEGL+K + SIRP+++S P S   +RIS  K ++  P+++
Sbjct: 19   EYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRD 78

Query: 3071 GRLKSSLYPHQCREAGLSYKGEFKVELNLQFDNKAVVRDHISFGQLPIMLRSKLCHLRGA 2892
             R+   LYP +CR+A +SY GEFKV+   QF+N A +R   +FG LPIML SKLCHLRGA
Sbjct: 79   VRMAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGA 138

Query: 2891 SPEELIFHKEEATEMGGYFICNGLERLARLLIVPKRNYPIGMVRKSFRGRGDGYTSKGVV 2712
               +LI+H EEATEMGGYFI  G+ERL R+L++ KRNYP+GMVR +F  RG GYT K VV
Sbjct: 139  DSRKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVV 198

Query: 2711 IRCVREDQSSVTIKLYYLQNGSARIGFWIRGREVLLPVGIILKALIDTNDHEIFLSLTSC 2532
            IRCV++DQ+SVT+KLYYLQNGSAR+GFW+  REVLLPVGI+LKALIDT+D EIF SLT C
Sbjct: 199  IRCVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVLKALIDTSDREIFASLTCC 258

Query: 2531 YNEKYQRQKGAVGTQLAGERAQIILDEVRALSLLTHSQCLEHIGEFFQPAIYGFXXXXXX 2352
            Y++KY+R KG V  QL GERAQIILDEVRALSLLT +QCLEHIG++F+ A+ GF      
Sbjct: 259  YSDKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEHIGQYFRSAMEGFEKDDYQ 318

Query: 2351 XXXXXVLRDYIFVHLANNYDKFNLLIFMLQKLFALVDQTAAPDNPDALQNQEVLLPGHLI 2172
                 VL+DY+ VHL NN+ KFNLLIFMLQKL+ALVDQTA+PDNPDALQ QE LLPG+LI
Sbjct: 319  TVAEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASPDNPDALQYQEALLPGYLI 378

Query: 2171 TLYVKEKLEEWLHKSIRDIKDEMSKNPA-EFEFNKLDAKKISRNSQSIGRAVESMIRIGK 1995
            T+++K+++++WL KS R I +E +KN + EF+ ++   K + ++S S+GRA+ES+I+IG+
Sbjct: 379  TVFLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLCKHSTSVGRAIESLIKIGR 438

Query: 1994 VATRSTLDLPQKDGMTIQAERLNFLRFISHFCAVHRGAAFAKMRTTSVRKLLPESWGFLC 1815
              ++S LDLPQ++GM+IQAERLNF R+ISHF +VHRG+AFAKMRTT+VRKLLPESWGFLC
Sbjct: 439  ANSQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAKMRTTTVRKLLPESWGFLC 498

Query: 1814 PVHTPDGEPCGLLNHMASSCRVTSFYDSDGKIKDFLKIRMTILTVLVGMGMASSLPKLEQ 1635
            PVHTPDGEPCGLLNHM S+CR++SFY S+G +KDF KI+  +L  LV  GM    PK+E 
Sbjct: 499  PVHTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRLLAELVRGGMIPLSPKMEH 558

Query: 1634 AGPPEVLHVLLDGCVVGSISSSNIEDAVGHLRRLKLSASSGFPADLEVGHVPLSLGGAYP 1455
             GPPEVLHV LDGC+VGSI S+ IE+ V ++RRLKL A    P DLEVG+VPLS+GGAYP
Sbjct: 559  TGPPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPATPEDLEVGYVPLSIGGAYP 618

Query: 1454 GLYLFTSPSRFVRPVRNIYQLSDVNHCVELIGPFEQAFMEIKCPDGGEGGRREGFPATHE 1275
            GLY FTSP+RFVRPV+N+  L D    +ELIG FEQAFMEI+CPDGG+GGR+E FPATHE
Sbjct: 619  GLYFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIRCPDGGDGGRKESFPATHE 678

Query: 1274 EIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAIGKRADVKLYHLQTPQS 1095
            EIHPT +LSVVANLTPWS+HNQSPRNMYQCQMAKQTMGF  QA+  R DVK +HLQTPQS
Sbjct: 679  EIHPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQS 738

Query: 1094 PIVRTSSYSKYCIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLCRGQIYQTETV 915
            PIVRT++Y KY +DEFP+GTNAIVAVL+YTGYDMEDAMILNKS+V+RG+ RG IYQTE +
Sbjct: 739  PIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGDIYQTECI 798

Query: 914  DLTKKHDKSTRVVEIFAR-XXXXXXXXXXXXDGLPYVGQKVQPNDPYYSSYNTLTSDIKP 738
            DL+     S  V EIFA+             DGLP VG+ + PN+ YYS+YNTLT  I+P
Sbjct: 799  DLSTTRRGS--VAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPNEQYYSTYNTLTGAIRP 856

Query: 737  TNMKSSEPAIIDFVSIDGTNLKNGIQKANIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPD 558
            T +K +EPA ID+V+++GTN K  +QK NIR RR RNP+IGDKFSSRHGQKGVCSQLWPD
Sbjct: 857  TRLKGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPD 916

Query: 557  IDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESVAAKGGCLKGQFMDATPFSNSVNKAD 378
            IDMPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAK G L G F+DATPF++SV + D
Sbjct: 917  IDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASSVKEGD 976

Query: 377  DNTSFESSSLVDELGPMLTSYGFNYHGVEVLYSGVFGTEMTCEIFIGPVYYQRLRHMVSD 198
             N  ++  S+VDE+GPML SYGFNYHGVEVLYSG+FGTE+TCEIFIGPVYYQRLRHMVSD
Sbjct: 977  GN-PWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRHMVSD 1035

Query: 197  KFQVRSTGVVDQVTRQPXXXXXXXXXXXXGEMERDSLLAHGAAYLLHDRLHSSSDYHIAE 18
            KFQVR+TG +DQVTRQP            GEMERD+LLAHGA+YLLHDRLHS SDYHIA+
Sbjct: 1036 KFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIAD 1095

Query: 17   VCSIC 3
            VCS+C
Sbjct: 1096 VCSLC 1100


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1467 bits (3799), Expect = 0.0
 Identities = 727/1048 (69%), Positives = 856/1048 (81%), Gaps = 7/1048 (0%)
 Frame = -3

Query: 3125 SKIRISFGKPYVNAPMKEGR---LKSSLYPHQCREAGLSYKGEFKVELNLQFDNKAVVRD 2955
            ++I + FG+P +  P KE     ++ +LYP +CR+A +SY G+   ++  Q+ N   +R+
Sbjct: 15   TRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIRE 74

Query: 2954 HISFGQLPIMLRSKLCHLRGASPEELIFHKEEATEMGGYFICNGLERLARLLIVPKRNYP 2775
              + GQ PIML+SKLCHLRGA P++L+  KEE++EMGGYFI NGLER+ RLLI+PKRNYP
Sbjct: 75   KFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 2774 IGMVRKSFRGRGDGYTSKGVVIRCVREDQSSVTIKLYYLQNGSARIGFWIRGREVLLPVG 2595
            + MVR SFR R +GYT K VVIRCVREDQS+VT+KLYYL+NGSAR+GFWI+GRE LLPVG
Sbjct: 135  MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 2594 IILKALIDTNDHEIFLSLTSCYNEKYQRQKGAVGTQLAGERAQIILDEVRALSLLTHSQC 2415
            ++LKALIDT DHEI+ SLT CY+EKY+  KGAVGTQL GER +IILDEVR LSL T  QC
Sbjct: 195  VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254

Query: 2414 LEHIGEFFQPAIYGFXXXXXXXXXXXVLRDYIFVHLANNYDKFNLLIFMLQKLFALVDQT 2235
            L+HIGE FQ  + G            VLR+YIFVHL NNYDKFNLLIFM+QKLF+L+DQT
Sbjct: 255  LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314

Query: 2234 AAPDNPDALQNQEVLLPGHLITLYVKEKLEEWLHKSIRDIKDEMSKNPAEFEFNKL-DAK 2058
            + PDNPD LQNQEVLLPGHLIT+Y+KEKL+EWL+K+ R ++DE++K    FEF+ L   K
Sbjct: 315  SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVK 373

Query: 2057 KI--SRNSQSIGRAVESMIRIGKVATRSTLDLPQKDGMTIQAERLNFLRFISHFCAVHRG 1884
            K+     S+ I  AVE+M++ G++ T+S LDL Q+ GMT+QAERLNFLRF+SHF AVHRG
Sbjct: 374  KVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRG 433

Query: 1883 AAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMASSCRVTSFYDSDGKIKDFLK 1704
            A+FA +RTTSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMAS+CR+TS++DS G  +DF K
Sbjct: 434  ASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFK 493

Query: 1703 IRMTILTVLVGMGMASSLPKLEQAGPPEVLHVLLDGCVVGSISSSNIEDAVGHLRRLKLS 1524
            IRM+IL+VL+G+GM  +LPKL QAGPPEVL V+LDG VVGSI SS +E AV HLRRLK+S
Sbjct: 494  IRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVS 553

Query: 1523 ASSGFPADLEVGHVPLSLGGAYPGLYLFTSPSRFVRPVRNIYQLSDVNHCVELIGPFEQA 1344
            A S  P DLEVG++PLS+GGAYPGLYLFTSPSRFVRPVRNI   S+  H +ELIGPFEQ 
Sbjct: 554  AISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQV 613

Query: 1343 FMEIKCPDGGEGGRREGFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM 1164
            +MEI+CPDG +GGRR  FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM
Sbjct: 614  YMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTM 673

Query: 1163 GFSAQAIGKRADVKLYHLQTPQSPIVRTSSYSKYCIDEFPTGTNAIVAVLAYTGYDMEDA 984
             FS+QAI  RAD KLYHLQTPQ+PIVRTS+Y KY +DEFPTGTNAIVAVLAY+GYDMEDA
Sbjct: 674  AFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDA 733

Query: 983  MILNKSSVERGLCRGQIYQTETVDLTKKHDKSTRVVEIFAR-XXXXXXXXXXXXDGLPYV 807
            MILNKSSV+RGLC GQIYQTET+DL+ +++KS R   +F R             DGLPYV
Sbjct: 734  MILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYV 793

Query: 806  GQKVQPNDPYYSSYNTLTSDIKPTNMKSSEPAIIDFVSIDGTNLKNGIQKANIRFRRPRN 627
            GQ + PN+PY S YN +TS  + T +K SEP I+D+V++D  N K+  QK NIRFRRPRN
Sbjct: 794  GQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRN 852

Query: 626  PVIGDKFSSRHGQKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESVAA 447
            P+IGDKFSSRHGQKGVCSQLWPDIDMPFS +TGMRPDLIINPHAFPSRMTI MLLESVAA
Sbjct: 853  PIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAA 912

Query: 446  KGGCLKGQFMDATPFSNSVNKADDNTSFESSSLVDELGPMLTSYGFNYHGVEVLYSGVFG 267
            KGG L G+F+DATPFS+S+ KA+     ESSSLVDELG MLTSYGFNYHGVEVLYSG +G
Sbjct: 913  KGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYG 972

Query: 266  TEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGVVDQVTRQPXXXXXXXXXXXXGEMERDSL 87
            TE+TCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQVTRQP            GEMERDS+
Sbjct: 973  TELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSM 1032

Query: 86   LAHGAAYLLHDRLHSSSDYHIAEVCSIC 3
            LAHGAAYLLHDRLH+ SD+HIA+VCS+C
Sbjct: 1033 LAHGAAYLLHDRLHTCSDHHIADVCSLC 1060


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1461 bits (3782), Expect = 0.0
 Identities = 720/1093 (65%), Positives = 871/1093 (79%), Gaps = 10/1093 (0%)
 Frame = -3

Query: 3251 DYSALRELVHPHIDSFDYFLDEGLEKAVTSIRPVELSDPVSGSKIRISFGKPYVNAPMKE 3072
            DY ALREL   HI+SFD+ +D GLE  + SI+PVE+ D  +  K+RI  GKP +  P KE
Sbjct: 10   DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69

Query: 3071 GRLKS---SLYPHQCREAGLSYKGEFKVELNLQFDNKAVVRDHISFGQLPIMLRSKLCHL 2901
              L++   +L P++CR+A +SY G+F  ++  Q+D KAV+R+  +FGQ PIML+SKLCHL
Sbjct: 70   RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLCHL 129

Query: 2900 RGASPEELIFHKEEATEMGGYFICNGLERLARLLIVPKRNYPIGMVRKSFRGRGDGYTSK 2721
            RG  P++L+ + EEA+EMGGYF+ NGLER+ RLLI PKRNYP  MVR SF  R +GYT K
Sbjct: 130  RGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDK 189

Query: 2720 GVVIRCVREDQSSVTIKLYYLQNGSARIGFWIRGREVLLPVGIILKALIDTNDHEIFLSL 2541
             VVIRCVREDQSSVT+KLYYL+NGSAR+GFW++G+E LLP+G++LKALIDT DHEI+ SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASL 249

Query: 2540 TSCYNEKYQRQKGAVGTQLAGERAQIILDEVRALSLLTHSQCLEHIGEFFQPAIYGFXXX 2361
            TSCY++K+ + KGAVGTQL GERA+IILDEVR L+L  H QCL+HIG+ FQP + G    
Sbjct: 250  TSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKE 309

Query: 2360 XXXXXXXXVLRDYIFVHLANNYDKFNLLIFMLQKLFALVDQTAAPDNPDALQNQEVLLPG 2181
                    VL+DYIFVHL NNYDKFNLLIFM QKLF+L+DQT+ PDNPD+LQNQ+VLLPG
Sbjct: 310  KFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPG 369

Query: 2180 HLITLYVKEKLEEWLHKSIRDIKDEMSKNPAEFEFNKL-DAKKI--SRNSQSIGRAVESM 2010
             LITLY+KEKLE+WL K  + ++DE+S     FEF  L   KK+     S+ +  AVE+M
Sbjct: 370  QLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENM 429

Query: 2009 IRIGKVATRSTLDLPQKDGMTIQAERLNFLRFISHFCAVHRGAAFAKMRTTSVRKLLPES 1830
            ++ G++ T++ LDL Q+ G T+QAERLNFLRF+SHF AVHRGA+FA +RTT+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 1829 WGFLCPVHTPDGEPCGLLNHMASSCRVTSFYDSDGKIKDFLKIRMTILTVLVGMGMASSL 1650
            WGFLCPVHTPDGEPCGLLNH+ S+CR+TS ++S GK++DF KIR +IL+VL+ +GM  SL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSL 549

Query: 1649 PKLEQAGPPEVLHVLLDGCVVGSISSSNIEDAVGHLRRLKLSASSGFPADLEVGHVPLSL 1470
            PKL Q G P+ L+VLLDG +VG ISS+ +E  V HLRRLK+ +    P DLEVG+VPLS+
Sbjct: 550  PKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSI 609

Query: 1469 GGAYPGLYLFTSPSRFVRPVRNIYQLSDVNHCVELIGPFEQAFMEIKCPDGGEGGRREGF 1290
             GAYPGLYLFTSPSRFVRPV+N+    + NH +ELIGPFEQ FMEI+CPDGG+GGR++ F
Sbjct: 610  SGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEF 669

Query: 1289 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAIGKRADVKLYHL 1110
            PATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS QAI  RAD KLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHL 729

Query: 1109 QTPQSPIVRTSSYSKYCIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLCRGQIY 930
            QTPQ+PIVRTS+Y+KY IDE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERG+  GQIY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 929  QTETVDLTKKHDKSTRVVEIFAR-XXXXXXXXXXXXDGLPYVGQKVQPNDPYYSSYNTLT 753
            QTET+DL+ + ++S+R  ++F R             DGLPYVGQ +QP++PY S Y+ + 
Sbjct: 790  QTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVA 849

Query: 752  SDIKPTNMKSSEPAIIDFVSIDGTNLKNGIQKANIRFRRPRNPVIGDKFSSRHGQKGVCS 573
               +   +K SE  I+D+VS+D  N KN  QK NIRFRRPRNP+IGDKFSSRHGQKGVCS
Sbjct: 850  GTTRTMKLKGSEAVIVDYVSVDVKN-KNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGVCS 908

Query: 572  QLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESVAAKGGCLKGQFMDATPFSNS 393
            QLWPD+DMPF   TGMRPDLIINPHAFPSRMTI ML+ESVAAKGGCL G+F++ATPF +S
Sbjct: 909  QLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSS 968

Query: 392  VNK---ADDNTSFESSSLVDELGPMLTSYGFNYHGVEVLYSGVFGTEMTCEIFIGPVYYQ 222
            VNK    D+ T+ E  +LVDELG  L   GFNYHG+EVLYSGV+GTE+TCEIFIGPVYYQ
Sbjct: 969  VNKTNAGDEETNGE--TLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1026

Query: 221  RLRHMVSDKFQVRSTGVVDQVTRQPXXXXXXXXXXXXGEMERDSLLAHGAAYLLHDRLHS 42
            RLRHMVSDK+QVRSTG VDQVTRQP            GEMERDS+LAHGA+YLLHDRLH+
Sbjct: 1027 RLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHT 1086

Query: 41   SSDYHIAEVCSIC 3
             SD+HIA+VCS+C
Sbjct: 1087 CSDHHIADVCSLC 1099


>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1162

 Score = 1456 bits (3768), Expect = 0.0
 Identities = 730/1096 (66%), Positives = 869/1096 (79%), Gaps = 4/1096 (0%)
 Frame = -3

Query: 3278 PRMAPMAKPDYSALRELVHPHIDSFDYFLDEGLEKAVTSIRPVELSDPVSGSKIRISFGK 3099
            P  A   + DYSALREL  PH++SFDYFLD+GL++ + SIRP+                 
Sbjct: 8    PSPAVAKEGDYSALRELFRPHVESFDYFLDKGLDEMIESIRPMG---------------- 51

Query: 3098 PYVNAPMKEGRLKS-SLYPH-QCREAGLSYKGEFKVELNLQFDNKAVVRDHISFGQLPIM 2925
             +V +PM+  R     +YP  QCR+A +SY GEFKVE+  Q++  A +R   +FG LPIM
Sbjct: 52   -HVLSPMRGARPGVLPIYPQEQCRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIM 110

Query: 2924 LRSKLCHLRGASPEELIFHKEEATEMGGYFICNGLERLARLLIVPKRNYPIGMVRKSFRG 2745
            L SKLCHLRGA P +L+FH EEATEMGGYFIC G+ERL R+L++ KRNYP+G+VR SF  
Sbjct: 111  LMSKLCHLRGADPHKLVFHGEEATEMGGYFICGGMERLVRILVLQKRNYPMGLVRNSFLK 170

Query: 2744 RGDGYTSKGVVIRCVREDQSSVTIKLYYLQNGSARIGFWIRGREVLLPVGIILKALIDTN 2565
            RG GYT K VVIRCV+ DQSSVTIKLYY+ NGSAR+GFW+ GRE LLPVGI+LKALID +
Sbjct: 171  RGAGYTDKAVVIRCVQRDQSSVTIKLYYILNGSARLGFWLGGREFLLPVGIVLKALIDAS 230

Query: 2564 DHEIFLSLTSCYNEKYQRQKGAVGTQLAGERAQIILDEVRALSLLTHSQCLEHIGEFFQP 2385
            D EIF SLT CY++K+ R KG V TQL GERAQI+LDEVR LS+LT +QCL HIG++F+ 
Sbjct: 231  DREIFTSLTCCYSDKHGRGKGVVSTQLIGERAQIVLDEVRNLSILTRTQCLVHIGQYFRS 290

Query: 2384 AIYGFXXXXXXXXXXXVLRDYIFVHLANNYDKFNLLIFMLQKLFALVDQTAAPDNPDALQ 2205
             + GF           VL+DYIFVHL NN+DKFNLLIFMLQKL+ALVDQTA+PDNPDALQ
Sbjct: 291  VMEGFENDDYITVAEAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNPDALQ 350

Query: 2204 NQEVLLPGHLITLYVKEKLEEWLHKSIRDIKDEMSKNPAEFEFNKLDAKK-ISRNSQSIG 2028
             QE LLPGHL T+++K++L+EWL KS R I +E +KN      N L+ +K +++ + S+G
Sbjct: 351  YQEALLPGHLFTVFLKDRLQEWLRKSKRLILEEAAKNKGFDLGNALEIRKFLTKYTTSVG 410

Query: 2027 RAVESMIRIGKVATRSTLDLPQKDGMTIQAERLNFLRFISHFCAVHRGAAFAKMRTTSVR 1848
            RAVESMI++G V +RS LDLPQ++GMTI AERLNF R+ISHF +VHRG+AFAKMRTTSVR
Sbjct: 411  RAVESMIKVGNVNSRSGLDLPQREGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTTSVR 470

Query: 1847 KLLPESWGFLCPVHTPDGEPCGLLNHMASSCRVTSFYDSDGKIKDFLKIRMTILTVLVGM 1668
            KLLPESWGFLCPVHTPDGEPCGLLNHM S+CRV+SFY+S+G IK+F +++  +   LV +
Sbjct: 471  KLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSFYNSEGVIKNFGEMKKLLSAELVRV 530

Query: 1667 GMASSLPKLEQAGPPEVLHVLLDGCVVGSISSSNIEDAVGHLRRLKLSASSGFPADLEVG 1488
            GM   LPK+EQ GPPEVLHV LDGC++G+I+S+ IE AV +LR LKL A SG P DLEVG
Sbjct: 531  GMNPVLPKIEQTGPPEVLHVHLDGCILGTIASAMIEKAVNYLRTLKLLAHSGIPEDLEVG 590

Query: 1487 HVPLSLGGAYPGLYLFTSPSRFVRPVRNIYQLSDVNHCVELIGPFEQAFMEIKCPDGGEG 1308
            +VP S  GA+PGLYLFT+P+RFVRPVRN++ LSD    +ELIGPFEQAFMEI+CPDGG+G
Sbjct: 591  YVPPSFNGAFPGLYLFTNPARFVRPVRNLFILSDGKQSIELIGPFEQAFMEIRCPDGGDG 650

Query: 1307 GRREGFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAIGKRAD 1128
            GR+E FPATHEEIHPT ILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF  QA+  R D
Sbjct: 651  GRQEPFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTD 710

Query: 1127 VKLYHLQTPQSPIVRTSSYSKYCIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGL 948
            VK +HLQTPQ+PIVRT +Y+KYC+DEFP+GTNAIVAVL+YTGYDMEDAMILNKS+VERG+
Sbjct: 711  VKAFHLQTPQTPIVRTGTYTKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVERGM 770

Query: 947  CRGQIYQTETVDLTKKHDKSTRVVEIFAR-XXXXXXXXXXXXDGLPYVGQKVQPNDPYYS 771
             RG IYQTE +DL+ K      V E FA+             DGLP +GQ V PN+ YYS
Sbjct: 771  FRGHIYQTECIDLSTK--SRDNVPETFAKSILTRDTSNVIDSDGLPRLGQAVHPNEQYYS 828

Query: 770  SYNTLTSDIKPTNMKSSEPAIIDFVSIDGTNLKNGIQKANIRFRRPRNPVIGDKFSSRHG 591
             +N+LT+ I+P  +K +EPA ID+V+++GT  K G+QKANIR RR RNP+IGDKFSSRHG
Sbjct: 829  VHNSLTNVIRPVKLKGTEPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHG 888

Query: 590  QKGVCSQLWPDIDMPFSAITGMRPDLIINPHAFPSRMTIGMLLESVAAKGGCLKGQFMDA 411
            QKGVCSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTI MLLES+AAK G L G+F+DA
Sbjct: 889  QKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDA 948

Query: 410  TPFSNSVNKADDNTSFESSSLVDELGPMLTSYGFNYHGVEVLYSGVFGTEMTCEIFIGPV 231
            TPF+NS+ K  D  S + +S+VDELGPML SYGFNYHG EVLYSGVFGTEM CEIFIGPV
Sbjct: 949  TPFANSLKK--DKDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPV 1006

Query: 230  YYQRLRHMVSDKFQVRSTGVVDQVTRQPXXXXXXXXXXXXGEMERDSLLAHGAAYLLHDR 51
            YYQRLRHMVSDKFQVR+TG +DQ+TRQP            GEMERD+LLAHG++YLLHDR
Sbjct: 1007 YYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDR 1066

Query: 50   LHSSSDYHIAEVCSIC 3
            LHS SDYHIA+VCS C
Sbjct: 1067 LHSCSDYHIADVCSFC 1082