BLASTX nr result

ID: Dioscorea21_contig00010848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010848
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   201   1e-49
ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   201   3e-49
gb|ABK94888.1| unknown [Populus trichocarpa]                          194   2e-47
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   193   5e-47
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...   192   9e-47

>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score =  201 bits (512), Expect = 1e-49
 Identities = 110/211 (52%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
 Frame = +1

Query: 1   MTKVHPNSGDLPENGGREV-----IXXXXXXXXVWHKSLLFNCNGFTVFDDKGNLVFRVD 165
           MTKV+PN+      G   V     +        VW KSLLFNCNGFTVFD KGNLVFRVD
Sbjct: 1   MTKVYPNA-TAASCGSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFRVD 59

Query: 166 NYSSTTSSEVVLMDAAGKPLLTVRRKKLSLTDQWLIYNGEEKRNPRFTARKHMNILQSKS 345
           NY +    E+VLMDA+GKPLLT+RRK+LSL D W++Y+GE   NPRF  RKH N+L SKS
Sbjct: 60  NYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNSKS 119

Query: 346 LTQVS------TCQKNSSVGSGCCYNIEGSYTQRSCMIYDERHNPVAEIKRKEDXXXXXX 507
           L +VS          +SS      Y IEGSY+QR C +YDE    VAEIKRKE       
Sbjct: 120 LARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGVAL 179

Query: 508 XXXXXXXXXQPEIESTLAMAIVVLLDQMFGS 600
                    QPE+++ +AMA+V+LLDQMFGS
Sbjct: 180 GVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|296089330|emb|CBI39102.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  201 bits (510), Expect = 3e-49
 Identities = 109/203 (53%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
 Frame = +1

Query: 1   MTKVHPNSGDLPENGGREVIXXXXXXXX-----VWHKSLLFNCNGFTVFDDKGNLVFRVD 165
           MTKV+PN+     + G E +             VW KSLLFNC+GFTVFD KGNLVFRVD
Sbjct: 1   MTKVYPNA--TAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVD 58

Query: 166 NYSSTTSSEVVLMDAAGKPLLTVRRKKLSLTDQWLIYNGEEKRNPRFTARKHMNILQSKS 345
           NY +    E+VLMDA+GKPLLT+RRK+LSL D WL+Y+GE   NPRF  RKH+N+L SKS
Sbjct: 59  NYVAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKS 118

Query: 346 LTQVSTCQKNSSVGSGCCYNIEGSYTQRSCMIYDERHNPVAEIKRKEDXXXXXXXXXXXX 525
           L +VS    +SS      Y IEGSY+QR C +YDER   VAEIKRKE             
Sbjct: 119 LARVS--GGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFR 176

Query: 526 XXXQPEIESTLAMAIVVLLDQMF 594
              QPE+++ +AMA+V+LLDQMF
Sbjct: 177 LIVQPEMDTPVAMALVILLDQMF 199


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  194 bits (494), Expect = 2e-47
 Identities = 100/174 (57%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
 Frame = +1

Query: 85  VWHKSLLFNCNGFTVFDDKGNLVFRVDNYSSTTSS--EVVLMDAAGKPLLTVRRKKLSLT 258
           VW KSLLFNCNGFTVFD KGNL+FRVDNY +T+ S  E+VLMDAAGKPLLT+RRK+LSL 
Sbjct: 42  VWKKSLLFNCNGFTVFDSKGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLG 101

Query: 259 DQWLIYNGEEKRNPRFTARKHMNILQSKSLTQVSTCQKNSSVGSGCCYNIEGSYTQRSCM 438
           D WL+Y+GE   NP F+ +KH++IL  K L  VS   + +       Y IEGSYTQR C 
Sbjct: 102 DSWLVYDGETAINPEFSVKKHVSILNKKCLAHVS---QAAGSNKNVMYEIEGSYTQRCCA 158

Query: 439 IYDERHNPVAEIKRKEDXXXXXXXXXXXXXXXQPEIESTLAMAIVVLLDQMFGS 600
           +YDE+   VAEIK+KE                 PEI+S++AMAIV++LDQMFGS
Sbjct: 159 VYDEKKRRVAEIKQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  193 bits (490), Expect = 5e-47
 Identities = 99/173 (57%), Positives = 121/173 (69%), Gaps = 2/173 (1%)
 Frame = +1

Query: 85  VWHKSLLFNCNGFTVFDDKGNLVFRVDNYSSTTSS--EVVLMDAAGKPLLTVRRKKLSLT 258
           VW KSLLFNCNGFTVFD KGNL+FRVDNY +T+ S  E+VLMDAAGKPLLT+RRK+LSL 
Sbjct: 42  VWKKSLLFNCNGFTVFDSKGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLG 101

Query: 259 DQWLIYNGEEKRNPRFTARKHMNILQSKSLTQVSTCQKNSSVGSGCCYNIEGSYTQRSCM 438
           D WL+Y+GE   NP F+ +KH++IL  K L  VS   + +       Y IEGSYTQR C 
Sbjct: 102 DSWLVYDGETAINPEFSVKKHVSILNKKCLAHVS---QAAGSNKNVMYEIEGSYTQRCCA 158

Query: 439 IYDERHNPVAEIKRKEDXXXXXXXXXXXXXXXQPEIESTLAMAIVVLLDQMFG 597
           +YDE+   VAEIK+KE                 PEI+S++AMAIV++LDQMFG
Sbjct: 159 VYDEKKRRVAEIKQKERVGGVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score =  192 bits (488), Expect = 9e-47
 Identities = 102/179 (56%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
 Frame = +1

Query: 85  VWHKSLLFNCNGFTVFDDKGNLVFRVDNY--SSTTSSEVVLMDAAGKPLLTVRRKKLSLT 258
           VW KSLLFNCNGFTV+D  GNLVFRVDNY   S  + E+VLMDA GKPLLT+RRK+LSL 
Sbjct: 34  VWKKSLLFNCNGFTVYDGSGNLVFRVDNYMAGSGANGEIVLMDADGKPLLTIRRKRLSLG 93

Query: 259 DQWLIYNGEEKRNPRFTARKHMNILQSKSLTQVSTCQKNSSVGS-----GCCYNIEGSYT 423
           D WL+Y+GE   NP F+ RKH+ IL +KSL  VS    NSS GS        Y IEGSY+
Sbjct: 94  DNWLVYDGETAVNPLFSVRKHVKILNTKSLAHVS---GNSSSGSTSNSKNIVYEIEGSYS 150

Query: 424 QRSCMIYDERHNPVAEIKRKEDXXXXXXXXXXXXXXXQPEIESTLAMAIVVLLDQMFGS 600
           QRSC +YD++H  VAEIK+KE                 P++++++AMAIV+LLDQMFGS
Sbjct: 151 QRSCAVYDDKHRRVAEIKQKEAVGGVAFGVDVFRLIIGPKMDTSVAMAIVILLDQMFGS 209


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