BLASTX nr result

ID: Dioscorea21_contig00010837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010837
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   239   5e-61
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   239   6e-61
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ...   238   8e-61
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   237   2e-60
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni...   236   4e-60

>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  239 bits (610), Expect = 5e-61
 Identities = 109/151 (72%), Positives = 127/151 (84%)
 Frame = -3

Query: 740  MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561
            MRKNLLK VRV+EF+PEA+FHDP P+F LPNVICSYCN         D+ L+  EWRCAV
Sbjct: 2074 MRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAV 2133

Query: 560  PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381
            PQCGQPY+RE MENALLQIVRQRERL+HLQD+VC+RC Q+KAAHLAEQC C G +R KED
Sbjct: 2134 PQCGQPYDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKED 2193

Query: 380  SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288
             SEF++KMQ+FLN+A  QKFQ+LQ+CTSWIL
Sbjct: 2194 VSEFRSKMQIFLNVAISQKFQLLQECTSWIL 2224


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  239 bits (609), Expect = 6e-61
 Identities = 109/151 (72%), Positives = 128/151 (84%)
 Frame = -3

Query: 740  MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561
            MRKNLLK VRV+EF+PEA+FHDP P+F LPNVICSYCN         DS ++  EWRCAV
Sbjct: 2067 MRKNLLKYVRVREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSAVLAEEWRCAV 2126

Query: 560  PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381
            PQCGQPY+RE MENALLQIVRQRERL+HLQD+VCLRC Q+KAAHL+EQC C G++R +ED
Sbjct: 2127 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCSCAGSYRCRED 2186

Query: 380  SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288
             SEF+ KMQ+FLN+A RQKFQ+LQ+CTSWIL
Sbjct: 2187 VSEFRRKMQIFLNVAIRQKFQLLQECTSWIL 2217


>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
            distachyon]
          Length = 2127

 Score =  238 bits (608), Expect = 8e-61
 Identities = 111/151 (73%), Positives = 127/151 (84%)
 Frame = -3

Query: 740  MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561
            MRKNLLKLVRVKEF+PEAQF DP  +FTLPNVICSYCN         DS L  HEWRCAV
Sbjct: 1974 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSALQGHEWRCAV 2033

Query: 560  PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381
            PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VCLRCRQ+KAAH++EQC CGG+FR KE+
Sbjct: 2034 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCLRCRQVKAAHVSEQCSCGGSFRCKEE 2093

Query: 380  SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288
            SS F +KM+VFL +A  QKF++LQDC  WIL
Sbjct: 2094 SSYFLSKMRVFLKVAVSQKFELLQDCVQWIL 2124


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  237 bits (604), Expect = 2e-60
 Identities = 111/151 (73%), Positives = 126/151 (83%)
 Frame = -3

Query: 740  MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561
            MRKNLLKLVRVKEF+PEAQF DP  +FTLPNVICSYCN         DS L   EWRCAV
Sbjct: 1982 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAV 2041

Query: 560  PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381
            PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VC+RCRQ+KAAHL+EQC CGG+FR KE+
Sbjct: 2042 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQCSCGGSFRCKEE 2101

Query: 380  SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288
            SS F +KM+VFL +A  QKFQ+LQDC  WIL
Sbjct: 2102 SSYFLSKMRVFLKVAVNQKFQLLQDCVQWIL 2132


>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
            [Oryza sativa Japonica Group]
          Length = 2257

 Score =  236 bits (602), Expect = 4e-60
 Identities = 111/151 (73%), Positives = 126/151 (83%)
 Frame = -3

Query: 740  MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561
            MRKNLLKLVRVKEF+PEAQF DP  +FTLPNVICSYCN         DS L   EWRCAV
Sbjct: 2104 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAV 2163

Query: 560  PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381
            PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VCLRCRQ+KAAHL+EQC CGG FR KE+
Sbjct: 2164 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEE 2223

Query: 380  SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288
            SS+F +KM+VFLN+A  QKF++LQD   WIL
Sbjct: 2224 SSQFLSKMRVFLNVAVSQKFELLQDVVQWIL 2254


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