BLASTX nr result
ID: Dioscorea21_contig00010837
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00010837 (775 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 239 5e-61 ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2... 239 6e-61 ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ... 238 8e-61 ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S... 237 2e-60 dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni... 236 4e-60 >ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus communis] gi|223531477|gb|EEF33309.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus communis] Length = 2227 Score = 239 bits (610), Expect = 5e-61 Identities = 109/151 (72%), Positives = 127/151 (84%) Frame = -3 Query: 740 MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561 MRKNLLK VRV+EF+PEA+FHDP P+F LPNVICSYCN D+ L+ EWRCAV Sbjct: 2074 MRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAV 2133 Query: 560 PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381 PQCGQPY+RE MENALLQIVRQRERL+HLQD+VC+RC Q+KAAHLAEQC C G +R KED Sbjct: 2134 PQCGQPYDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAYRCKED 2193 Query: 380 SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288 SEF++KMQ+FLN+A QKFQ+LQ+CTSWIL Sbjct: 2194 VSEFRSKMQIFLNVAISQKFQLLQECTSWIL 2224 >ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1| predicted protein [Populus trichocarpa] Length = 2221 Score = 239 bits (609), Expect = 6e-61 Identities = 109/151 (72%), Positives = 128/151 (84%) Frame = -3 Query: 740 MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561 MRKNLLK VRV+EF+PEA+FHDP P+F LPNVICSYCN DS ++ EWRCAV Sbjct: 2067 MRKNLLKYVRVREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSAVLAEEWRCAV 2126 Query: 560 PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381 PQCGQPY+RE MENALLQIVRQRERL+HLQD+VCLRC Q+KAAHL+EQC C G++R +ED Sbjct: 2127 PQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCSCAGSYRCRED 2186 Query: 380 SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288 SEF+ KMQ+FLN+A RQKFQ+LQ+CTSWIL Sbjct: 2187 VSEFRRKMQIFLNVAIRQKFQLLQECTSWIL 2217 >ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium distachyon] Length = 2127 Score = 238 bits (608), Expect = 8e-61 Identities = 111/151 (73%), Positives = 127/151 (84%) Frame = -3 Query: 740 MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561 MRKNLLKLVRVKEF+PEAQF DP +FTLPNVICSYCN DS L HEWRCAV Sbjct: 1974 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSALQGHEWRCAV 2033 Query: 560 PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381 PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VCLRCRQ+KAAH++EQC CGG+FR KE+ Sbjct: 2034 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCLRCRQVKAAHVSEQCSCGGSFRCKEE 2093 Query: 380 SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288 SS F +KM+VFL +A QKF++LQDC WIL Sbjct: 2094 SSYFLSKMRVFLKVAVSQKFELLQDCVQWIL 2124 >ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor] gi|241931984|gb|EES05129.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor] Length = 2135 Score = 237 bits (604), Expect = 2e-60 Identities = 111/151 (73%), Positives = 126/151 (83%) Frame = -3 Query: 740 MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561 MRKNLLKLVRVKEF+PEAQF DP +FTLPNVICSYCN DS L EWRCAV Sbjct: 1982 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAV 2041 Query: 560 PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381 PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VC+RCRQ+KAAHL+EQC CGG+FR KE+ Sbjct: 2042 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQCSCGGSFRCKEE 2101 Query: 380 SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288 SS F +KM+VFL +A QKFQ+LQDC WIL Sbjct: 2102 SSYFLSKMRVFLKVAVNQKFQLLQDCVQWIL 2132 >dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b [Oryza sativa Japonica Group] Length = 2257 Score = 236 bits (602), Expect = 4e-60 Identities = 111/151 (73%), Positives = 126/151 (83%) Frame = -3 Query: 740 MRKNLLKLVRVKEFSPEAQFHDPSPTFTLPNVICSYCNXXXXXXXXXDSVLMEHEWRCAV 561 MRKNLLKLVRVKEF+PEAQF DP +FTLPNVICSYCN DS L EWRCAV Sbjct: 2104 MRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAV 2163 Query: 560 PQCGQPYNREQMENALLQIVRQRERLFHLQDVVCLRCRQIKAAHLAEQCVCGGTFRVKED 381 PQCGQPY+REQMENALLQ+VRQRERL+HLQD+VCLRCRQ+KAAHL+EQC CGG FR KE+ Sbjct: 2164 PQCGQPYHREQMENALLQVVRQRERLYHLQDLVCLRCRQVKAAHLSEQCSCGGAFRCKEE 2223 Query: 380 SSEFQNKMQVFLNIARRQKFQMLQDCTSWIL 288 SS+F +KM+VFLN+A QKF++LQD WIL Sbjct: 2224 SSQFLSKMRVFLNVAVSQKFELLQDVVQWIL 2254