BLASTX nr result

ID: Dioscorea21_contig00010833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010833
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315479.1| f-box family protein [Populus trichocarpa] g...   276   1e-71
ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thalian...   259   1e-66
ref|XP_002890155.1| kelch repeat-containing F-box family protein...   257   5e-66
ref|XP_002519349.1| conserved hypothetical protein [Ricinus comm...   255   2e-65
gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domai...   249   1e-63

>ref|XP_002315479.1| f-box family protein [Populus trichocarpa]
            gi|222864519|gb|EEF01650.1| f-box family protein [Populus
            trichocarpa]
          Length = 413

 Score =  276 bits (705), Expect = 1e-71
 Identities = 156/388 (40%), Positives = 220/388 (56%), Gaps = 14/388 (3%)
 Frame = -2

Query: 1289 MESQPGDMIPGLPDDLALNCLVRISHGYHGLLKCVSKKWEAAIKSDDYLCLKEKEGLCGN 1110
            +ES    +IPGLPDDLAL CL ++SHGYHGLL+ VSK+W   I+S DY   + K+G CG+
Sbjct: 8    LESMHQPIIPGLPDDLALRCLAKVSHGYHGLLESVSKRWRDMIRSADYARYRAKQGCCGD 67

Query: 1109 WLIALSPSEHTFNCVAYDPDADRWHPIPPVP-TTQRRLSYGHSCVSACKRCFIIGGAYTK 933
            WL  L+   +    VA+DP+ADRWHP+P V      R  +G SCV    R  +IGG+Y  
Sbjct: 68   WLFVLTEQSNN-QWVAFDPEADRWHPLPKVSGDCADRQHFGFSCVCVYNRLLVIGGSYAP 126

Query: 932  STFGL----PVPSSEVLMFDPFKMNWSRVSDMTRGRYCFACAAVLDKIYVAGGSDISQET 765
                +    P+ +  VL FDPFK  W+ V+ M   R  FAC+ +  K+YVAGG ++S   
Sbjct: 127  LDSSVLIQRPLITDNVLQFDPFKKQWTSVARMRTPRSHFACSVIAGKVYVAGGRNLSCTK 186

Query: 764  GEGLASASAEVYDPLENRWDELPPMPVPLIGCFGVSHSGQFHVLGRKGPDGGEVDTYFRF 585
            G  L    AEVYDPL ++W+ELPPMP PL+ C G+S+ G+FHVL  +     E +    F
Sbjct: 187  GLAL----AEVYDPLTDKWEELPPMPAPLMDCLGLSYKGKFHVLSDQ-VGLSETNITHVF 241

Query: 584  NPADHRWHSGNDFEELPRSSH--LYPSATHGVYAVDD--KRAIQYPENGLRNWQTIGVIP 417
            NP+ + W +  D     R+    +       VY V D  +  I+  ++    W T+G +P
Sbjct: 242  NPSINTWCTMEDIWPFSRAMQFAVQVMCDGRVYTVVDWGESLIKTRDSEGGEWYTVGSVP 301

Query: 416  DVALPNHDQLLAPFNYVFVSYKKYLFLMGGSVLKFD----GRYRCSFIPKLRTARFCDTT 249
             V L NH + L  F+Y F S +  L+++GG VLK++    GR+    I +L   RFC+  
Sbjct: 302  SVILTNHTRALEAFSYGFASLRDELYILGGKVLKWEEAGAGRFD---IVRLDLVRFCNPV 358

Query: 248  QLPLEWRDARPL-PPAYAGPTECFTLEE 168
              PL+W++ RP+  PA      C +LEE
Sbjct: 359  ARPLKWKETRPMCGPACGSILGCASLEE 386


>ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thaliana]
            gi|122242689|sp|Q0WW40.1|FBK5_ARATH RecName:
            Full=F-box/kelch-repeat protein At1g16250
            gi|110741130|dbj|BAE98658.1| hypothetical protein
            [Arabidopsis thaliana] gi|119360151|gb|ABL66804.1|
            At1g16250 [Arabidopsis thaliana]
            gi|332191305|gb|AEE29426.1| F-box/kelch-repeat protein
            [Arabidopsis thaliana]
          Length = 383

 Score =  259 bits (663), Expect = 1e-66
 Identities = 148/388 (38%), Positives = 206/388 (53%), Gaps = 14/388 (3%)
 Frame = -2

Query: 1289 MESQPGDMIPGLPDDLALNCLVRISHGYHGLLKCVSKKWEAAIKSDDYLCLKEKEGLCGN 1110
            MES    +IPGLPDDLAL C+ ++SHGYHG+L+CVS+ W   ++  DY C K + G  G+
Sbjct: 1    MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGS 60

Query: 1109 WLIALSPSEHTFNCVAYDPDADRWHPIPPVPTTQRRLSY-GHSCVSACKRCFIIGGAYTK 933
            WL  L+        VAYDP+ADRWHP+P     Q    + G +CV       +IGG Y  
Sbjct: 61   WLFVLTERSKN-QWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAP 119

Query: 932  STFGL----PVPSSEVLMFDPFKMNWSRVSDMTRGRYCFACAAVLDKIYVAGGSDISQET 765
            S        PV + +V+ FDPFK  W  V+ M   R  FAC +V  K+YVAGG +++   
Sbjct: 120  SVSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSR 179

Query: 764  GEGLASASAEVYDPLENRWDELPPMPVPLIGCFGVSHSGQFHVLGRKGPDGGEVDTYFRF 585
            G      SAEVYDP+ +RW+ELP MP P + C G+S+ G FHVL  +     E ++   F
Sbjct: 180  G----IPSAEVYDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQ-VGFAEQNSSEVF 234

Query: 584  NPADHRWHSGNDFEELPRSSHLYPSATHG--VYAVDD--KRAIQYPENGLRNWQTIGVIP 417
            NP D  W +  D     R+            VY + D  +  I+  +     W  +G +P
Sbjct: 235  NPRDMTWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVP 294

Query: 416  DVALPNHDQLLAPFNYVFVSYKKYLFLMGGSVLKFD----GRYRCSFIPKLRTARFCDTT 249
             V LPNH + L  F Y F + +  L+++GG VLK++    GR+    I +L   R C+  
Sbjct: 295  SVVLPNHPRELEAFGYGFAALRNELYVIGGKVLKWEESGAGRFD---IVRLPVVRVCNPL 351

Query: 248  QLPLEWRDARPL-PPAYAGPTECFTLEE 168
              PL WR+ +P+  PA      C +LEE
Sbjct: 352  DRPLNWRETKPMCIPAGGSIIGCVSLEE 379


>ref|XP_002890155.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297335997|gb|EFH66414.1| kelch
            repeat-containing F-box family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 404

 Score =  257 bits (657), Expect = 5e-66
 Identities = 149/388 (38%), Positives = 205/388 (52%), Gaps = 14/388 (3%)
 Frame = -2

Query: 1289 MESQPGDMIPGLPDDLALNCLVRISHGYHGLLKCVSKKWEAAIKSDDYLCLKEKEGLCGN 1110
            MES    +IPGLPDDLAL C+ ++SHGYHG+L+CVS+ W   ++S DY   K + G  G+
Sbjct: 22   MESIEQSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRSVDYSSYKARNGWSGS 81

Query: 1109 WLIALSPSEHTFNCVAYDPDADRWHPIPPVPTTQRRLSY-GHSCVSACKRCFIIGGAYTK 933
            WL  L+        VAYDP ADRWHP+P     Q    + G +CV       +IGG Y  
Sbjct: 82   WLFVLTERSKN-QWVAYDPQADRWHPLPTTRAVQDGWHHSGFACVCVSNCLLVIGGCYAP 140

Query: 932  STFGL----PVPSSEVLMFDPFKMNWSRVSDMTRGRYCFACAAVLDKIYVAGGSDISQET 765
            S        PV + +V+ FDPFK  W  V+ M   R  FAC AV  K+YVAGG +++   
Sbjct: 141  SVSSFPHQKPVVTKDVMRFDPFKKEWKMVASMRTPRTHFACTAVSGKVYVAGGRNLTHSR 200

Query: 764  GEGLASASAEVYDPLENRWDELPPMPVPLIGCFGVSHSGQFHVLGRKGPDGGEVDTYFRF 585
            G      SAEVYDP+ +RW+ELP MP P + C G+S+ G FHVL  +     E ++   F
Sbjct: 201  G----IPSAEVYDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQ-VGFAEQNSSEVF 255

Query: 584  NPADHRWHSGNDFEELPRSSHLYPSATHG--VYAVDD--KRAIQYPENGLRNWQTIGVIP 417
            NP D  W +  D     R+            VY + D  +  I+  +     W  +G +P
Sbjct: 256  NPRDMTWSTVEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVP 315

Query: 416  DVALPNHDQLLAPFNYVFVSYKKYLFLMGGSVLKFD----GRYRCSFIPKLRTARFCDTT 249
             V LPNH + L  F Y F + +  L+++GG VLK++    GR+    I +L   R C+  
Sbjct: 316  SVVLPNHPRELEAFGYGFAALRDELYVIGGKVLKWEESGAGRFD---IVRLPVVRVCNPL 372

Query: 248  QLPLEWRDARPL-PPAYAGPTECFTLEE 168
              PL WR+ +P+  PA      C +LEE
Sbjct: 373  DRPLNWRETKPMCIPAGGSIIGCVSLEE 400


>ref|XP_002519349.1| conserved hypothetical protein [Ricinus communis]
            gi|223541664|gb|EEF43213.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  255 bits (652), Expect = 2e-65
 Identities = 155/395 (39%), Positives = 209/395 (52%), Gaps = 19/395 (4%)
 Frame = -2

Query: 1295 GKMESQPGDMIPGLPDDLALNCLVRISHGYHGLLKCVSKKWEAAIKSDDYLCLKEKEGLC 1116
            G  ES    +IPGLPDDLAL CL ++SHG+HGLL+ VSK+W   I+S DY   K +EG C
Sbjct: 4    GSQESIHQPIIPGLPDDLALRCLAKLSHGHHGLLETVSKRWRNLIRSLDYGHYKSREGWC 63

Query: 1115 GNWLIALSPSEHTFNCVAYDPDADRWHPIPPVPTTQRRLS-YGHSCVSACKRCFIIGGAY 939
            GNWL  L+        VAYDP+ADRWHP+P           +G SCV    R  +IGG+Y
Sbjct: 64   GNWLFVLTEQSKN-QWVAYDPEADRWHPLPNSSEDYAGWQHFGFSCVCVSNRLLVIGGSY 122

Query: 938  TKSTFGLP----VPSSEVLMFDPFKMNWSRVSDMTRGRYCFACAAVLDKIYVAGGSDISQ 771
              +   LP    + + +VL FDPFK  W  ++ M   R  FAC+ +  K+YVAGG ++S 
Sbjct: 123  MPNDSSLPHQKPLITDQVLQFDPFKKEWKSMARMRTPRSHFACSVISGKVYVAGGRNLSC 182

Query: 770  ETGEGLASASAEVYDPLEN----RWDELPPMPVPLIGCFGVSHSGQFHVL----GRKGPD 615
              G  LA    EVYDPL +    RWDELPPMP P   C G+S+ G+ HVL    G    +
Sbjct: 183  TRGLALA----EVYDPLLDNRNCRWDELPPMPNPQTDCLGLSYKGKLHVLSDQVGLSDMN 238

Query: 614  GGEVDTYFRFNPADHRWHSGNDFEELPRSSH--LYPSATHGVYAVDD--KRAIQYPENGL 447
              +V     F P+   W    D     R+    +       VY V D  +  I+  ++  
Sbjct: 239  ASQV-----FEPSKESWCIVKDIWPFSRAMQFSVQVMGDGQVYTVVDWGESLIKTRDSEK 293

Query: 446  RNWQTIGVIPDVALPNHDQLLAPFNYVFVSYKKYLFLMGGSVLKFDGRYRCSF-IPKLRT 270
              W  +G +P V L NH + L  F Y F + ++ LF++GG VLK++      F I +L  
Sbjct: 294  GEWYNVGAVPSVILHNHTRALEAFGYGFATLREELFVLGGKVLKWEEAGNGRFDIVRLDL 353

Query: 269  ARFCDTTQLPLEWRDARPL-PPAYAGPTECFTLEE 168
             R C+    PL W++ARP+  PA      C +LEE
Sbjct: 354  VRVCNPIVRPLNWKEARPMCRPARGSILGCASLEE 388


>gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domains [Arabidopsis thaliana]
          Length = 439

 Score =  249 bits (637), Expect = 1e-63
 Identities = 142/377 (37%), Positives = 199/377 (52%), Gaps = 14/377 (3%)
 Frame = -2

Query: 1256 LPDDLALNCLVRISHGYHGLLKCVSKKWEAAIKSDDYLCLKEKEGLCGNWLIALSPSEHT 1077
            LPDDLAL C+ ++SHGYHG+L+CVS+ W   ++  DY C K + G  G+WL  L+     
Sbjct: 68   LPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTERSKN 127

Query: 1076 FNCVAYDPDADRWHPIPPVPTTQRRLSY-GHSCVSACKRCFIIGGAYTKSTFGL----PV 912
               VAYDP+ADRWHP+P     Q    + G +CV       +IGG Y  S        PV
Sbjct: 128  -QWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPHQKPV 186

Query: 911  PSSEVLMFDPFKMNWSRVSDMTRGRYCFACAAVLDKIYVAGGSDISQETGEGLASASAEV 732
             + +V+ FDPFK  W  V+ M   R  FAC +V  K+YVAGG +++   G      SAEV
Sbjct: 187  VTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRG----IPSAEV 242

Query: 731  YDPLENRWDELPPMPVPLIGCFGVSHSGQFHVLGRKGPDGGEVDTYFRFNPADHRWHSGN 552
            YDP+ +RW+ELP MP P + C G+S+ G FHVL  +     E ++   FNP D  W +  
Sbjct: 243  YDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQ-VGFAEQNSSEVFNPRDMTWSTVE 301

Query: 551  DFEELPRSSHLYPSATHG--VYAVDD--KRAIQYPENGLRNWQTIGVIPDVALPNHDQLL 384
            D     R+            VY + D  +  I+  +     W  +G +P V LPNH + L
Sbjct: 302  DVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPREL 361

Query: 383  APFNYVFVSYKKYLFLMGGSVLKFD----GRYRCSFIPKLRTARFCDTTQLPLEWRDARP 216
              F Y F + +  L+++GG VLK++    GR+    I +L   R C+    PL WR+ +P
Sbjct: 362  EAFGYGFAALRNELYVIGGKVLKWEESGAGRFD---IVRLPVVRVCNPLDRPLNWRETKP 418

Query: 215  L-PPAYAGPTECFTLEE 168
            +  PA      C +LEE
Sbjct: 419  MCIPAGGSIIGCVSLEE 435


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