BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010810
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   546   e-153
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   541   e-151
ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   541   e-151
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   521   e-146
ref|NP_564488.1| sequence-specific DNA binding transcription fac...   521   e-145

>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  546 bits (1406), Expect = e-153
 Identities = 274/358 (76%), Positives = 309/358 (86%), Gaps = 2/358 (0%)
 Frame = +2

Query: 53   MSRTLVQPIGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 232
            MSR + QPIGQKRLTNVAVVRLKK+G RFEIACYKNKVLSWRSGVEKDLDEVLQS  VYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 233  NVSKGILAKSKELIAAFGTD-DQAKICLEILEKGELQIAGKERESQLSSQFRDIATIVMQ 409
            NVSKG+LAKSK+L AAFG + DQ +I LEIL+KGELQ+AGKERESQLSSQFRDIATIVMQ
Sbjct: 61   NVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 410  KTINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRIRAI 589
            KTINPETQRPYT SMIERLMHEIHF+VDP++SSKKQALEVIRELQKHFPIKR PMR+R  
Sbjct: 121  KTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLT 180

Query: 590  IPEKNFPPLMEKLKEWNTNIVSQDESAEHLSIVCEMEPGFFRDCDALVRNWLGRVEILAV 769
            +P++NF  L+EKL  WN +IVS+DES   LSI+CEMEPG FRDCDALVRN  GR+EILAV
Sbjct: 181  VPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILAV 240

Query: 770  SVHVEGDTHVDQYEELEDSSSRSTSE-MDPIRQLGEKLEKSGISKESSNAPEQVKQNRCN 946
            S+H+EGDTHVD Y++ E   SR   E  DP+ QL EK+++  IS  SS+   +VKQN+C+
Sbjct: 241  SLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKCS 300

Query: 947  TCDAIVGDAKQYREHFKSEWHKHNLKRKTRQLPPLSAEECATDMEIGDSKADLKEYSF 1120
            TCDA VGD+KQYREHFKSEWHKHNL RKTRQLPPLSAEEC TDME+ D KADLK+YSF
Sbjct: 301  TCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYSF 358


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  541 bits (1394), Expect = e-151
 Identities = 267/357 (74%), Positives = 304/357 (85%), Gaps = 1/357 (0%)
 Frame = +2

Query: 53   MSRTLVQPIGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 232
            MS++L+QPIGQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKDLDEVLQS TVYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 233  NVSKGILAKSKELIAAFGTDDQAKICLEILEKGELQIAGKERESQLSSQFRDIATIVMQK 412
            NVSKG+LAKSK+L  AFGTDDQ KICLEILEKGELQ+AGKERESQL+SQFRDIAT+VMQK
Sbjct: 61   NVSKGVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQK 120

Query: 413  TINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRIRAII 592
            T+NPETQRPYTISMIERLMHEIHFAVDPH+SSKKQALEVIRELQKHFPIKRSPMR+R  I
Sbjct: 121  TVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAI 180

Query: 593  PEKNFPPLMEKLKEWNTNIVSQDESAEHLSIVCEMEPGFFRDCDALVRNWLGRVEILAVS 772
             E N   L+EKL  WN  +VS+DES   LS++CE++PG FR+CD LVRN  GR+EILA+S
Sbjct: 181  SEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMS 240

Query: 773  VHVEGDTHVDQYEELED-SSSRSTSEMDPIRQLGEKLEKSGISKESSNAPEQVKQNRCNT 949
            VH EGD HVD Y++ ED  +S      D + QL EK++K  IS E  N  E VKQ++CNT
Sbjct: 241  VHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKNEGE-VKQHKCNT 299

Query: 950  CDAIVGDAKQYREHFKSEWHKHNLKRKTRQLPPLSAEECATDMEIGDSKADLKEYSF 1120
            C+A VGDAK+YR+HFKSEWHKHNL+RKTR L PL+AEEC  D+E+ DSKADLK+YSF
Sbjct: 300  CNAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  541 bits (1394), Expect = e-151
 Identities = 266/357 (74%), Positives = 304/357 (85%), Gaps = 1/357 (0%)
 Frame = +2

Query: 53   MSRTLVQPIGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 232
            MS  L+QP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKDLDEVLQS TVYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 233  NVSKGILAKSKELIAAFGTDDQAKICLEILEKGELQIAGKERESQLSSQFRDIATIVMQK 412
            NVSKG+LAK+ +L+ AFG DD  KICLEILEKGELQ+AGKER+SQLSSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK 120

Query: 413  TINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRIRAII 592
            TINPETQRPYTISM+ERLMHEIHFAVDPH+SSKKQAL+VIRELQKHFPIKRSPMR+R  +
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV 180

Query: 593  PEKNFPPLMEKLKEWNTNIVSQDESAEHLSIVCEMEPGFFRDCDALVRNWLGRVEILAVS 772
              + FP L+EKL  W+ N+VS+DES  H S++CEM+PGFFRDCDALVRN  GR+EILAVS
Sbjct: 181  IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS 240

Query: 773  VHVEGDTHVDQYEELEDSSSRSTSE-MDPIRQLGEKLEKSGISKESSNAPEQVKQNRCNT 949
            VH EGDTHVD +++ ED       E  D   QL EK++K  IS+E   A    KQN+C+T
Sbjct: 241  VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEE-KKADTLAKQNKCST 299

Query: 950  CDAIVGDAKQYREHFKSEWHKHNLKRKTRQLPPLSAEECATDMEIGDSKADLKEYSF 1120
            C+A VGDAKQ+R+HFKS+WHKHNLKRKT+QLPPL+AEEC  DM++ DSKADLKEYSF
Sbjct: 300  CNAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  521 bits (1343), Expect = e-146
 Identities = 253/370 (68%), Positives = 308/370 (83%), Gaps = 14/370 (3%)
 Frame = +2

Query: 53   MSRTLVQPIGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 232
            MS+TLVQP+GQKRLTNVAVVRLKK+G RFEIACYKNKVLSWRSGVEKD+DEVLQS TVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 233  NVSKGILAKSKELIAAFGTDDQAKICLEILEKGELQIAGKERESQLSSQFRDIATIVMQK 412
            NVSKG+LAKSK+L+ AFG+DD  KIC++ILEKGELQ+AGKERESQ SSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 413  TINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRIRAII 592
            TINPETQRPYTI M+ERLMHEIHFAVDPH++SKKQAL+VIRELQK FPIKRSPMR+R  +
Sbjct: 121  TINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLTV 180

Query: 593  PEKNFPPLMEKLKEWNTNIVSQDESAEHLSIVCEMEPGFFRDCDALVRNWLGRVEILAVS 772
            P +NFP L+EKLKEW  ++VS+DES   +S VCEMEPG FR+CD+ VRN  GR+EILAVS
Sbjct: 181  PVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQGRLEILAVS 240

Query: 773  VHVEGDTHVDQYEELEDSSSRSTSEM-----------DPIRQLGEKLEKSGISKESS--- 910
            VH EGDT++D Y+E +D + ++   +           DP+ +L +K++K  IS   +   
Sbjct: 241  VHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKMQKQEISTADTIKQ 300

Query: 911  NAPEQVKQNRCNTCDAIVGDAKQYREHFKSEWHKHNLKRKTRQLPPLSAEECATDMEIGD 1090
               E+ K  +C+TC+  VG+AK+YREH KS+WHKHNLKRKTR+LPPLSAEEC +++++ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAEECMSEIDMDD 360

Query: 1091 SKADLKEYSF 1120
            S+ADLK+YSF
Sbjct: 361  SRADLKDYSF 370


>ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
            thaliana] gi|7523664|gb|AAF63104.1|AC006423_5 Unknown
            protein [Arabidopsis thaliana] gi|15450898|gb|AAK96720.1|
            Unknown protein [Arabidopsis thaliana]
            gi|30725592|gb|AAP37818.1| At1g43860 [Arabidopsis
            thaliana] gi|332193881|gb|AEE32002.1| sequence-specific
            DNA binding transcription factor [Arabidopsis thaliana]
          Length = 370

 Score =  521 bits (1342), Expect = e-145
 Identities = 253/370 (68%), Positives = 310/370 (83%), Gaps = 14/370 (3%)
 Frame = +2

Query: 53   MSRTLVQPIGQKRLTNVAVVRLKKRGTRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 232
            MS+TLVQP+GQKRLTNVAVVRLKK+G RFEIACYKNKVLSWRSGVEKD+DEVLQS TVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 233  NVSKGILAKSKELIAAFGTDDQAKICLEILEKGELQIAGKERESQLSSQFRDIATIVMQK 412
            NVSKG+LAKSK+L+ +FG+DD  KIC++ILEKGELQ+AGKERESQ SSQFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 413  TINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRIRAII 592
            TINPETQRPYTISM+ERLMHEIHFAVDPH++SKKQAL+VIRELQKHFPIKRSPMR+R  +
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 593  PEKNFPPLMEKLKEWNTNIVSQDESAEHLSIVCEMEPGFFRDCDALVRNWLGRVEILAVS 772
            P +NFP L+EKLKEW+ ++VS+DES   +S VCEMEPG FR+CD+ VR+  GR+EILAVS
Sbjct: 181  PVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRSIQGRLEILAVS 240

Query: 773  VHVEGDTHVDQYEELEDSSSRSTSEM-----------DPIRQLGEKLEKSGISKESS--- 910
            VH EGDT +D Y+E +D + ++   +           DP+ +L +KL+K  IS   +   
Sbjct: 241  VHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIKQ 300

Query: 911  NAPEQVKQNRCNTCDAIVGDAKQYREHFKSEWHKHNLKRKTRQLPPLSAEECATDMEIGD 1090
               E+ K  +C+TC+  VG+AKQYREH KS+WHKHNLKRKTR+LPP+SA+EC +++++ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMDD 360

Query: 1091 SKADLKEYSF 1120
            S+ADLK+YSF
Sbjct: 361  SRADLKDYSF 370