BLASTX nr result

ID: Dioscorea21_contig00010798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010798
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574990.1| PREDICTED: SKP1-like protein 4-like [Brachyp...   162   1e-37
gb|EAZ06800.1| hypothetical protein OsI_29044 [Oryza sativa Indi...   162   1e-37
gb|EAZ06798.1| hypothetical protein OsI_29042 [Oryza sativa Indi...   161   2e-37
dbj|BAD05286.1| putative SKP1 [Oryza sativa Japonica Group] gi|1...   160   2e-37
ref|NP_001061672.1| Os08g0375700 [Oryza sativa Japonica Group] g...   160   2e-37

>ref|XP_003574990.1| PREDICTED: SKP1-like protein 4-like [Brachypodium distachyon]
          Length = 162

 Score =  162 bits (409), Expect = 1e-37
 Identities = 80/161 (49%), Positives = 114/161 (70%), Gaps = 9/161 (5%)
 Frame = -2

Query: 619 ETSAQRKILLKSAEGEEFLVDELLARGSKMISNVIDDGCTEGGIPLPNVTAPVLSKVLEY 440
           E+  ++ ILL+S++G+EF V+E +A+ S+ I ++I+D C + GIPLPNV A +L+KV+EY
Sbjct: 3   ESDTKKMILLRSSDGKEFEVEEAVAKESRTILHMIEDDCADNGIPLPNVDAKILTKVIEY 62

Query: 439 WKHHVGKSETDK---------DAREFDRDFVKDTSSSMLFDVIMAANYLDCKPLLDLTCQ 287
            K H   ++            D +EFD DFVK    ++LFD+I+AANYLD K LLDLTCQ
Sbjct: 63  CKKHAAAADPSAADSNSTAAADLKEFDADFVK-VDQAVLFDLILAANYLDIKGLLDLTCQ 121

Query: 286 AVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 164
            VAD+I+   VE++R  F I NDFTP+EEA +R+EN+WAF+
Sbjct: 122 TVADMIKGKTVEEIRTKFNIKNDFTPEEEAEIRKENQWAFE 162


>gb|EAZ06800.1| hypothetical protein OsI_29044 [Oryza sativa Indica Group]
          Length = 169

 Score =  162 bits (409), Expect = 1e-37
 Identities = 81/163 (49%), Positives = 116/163 (71%), Gaps = 13/163 (7%)
 Frame = -2

Query: 613 SAQRKILLKSAEGEEFLVDELLARGSKMISNVIDDGCTEGGIPLPNVTAPVLSKVLEYWK 434
           + ++ ILL S++GE F + E  A  SK +S++I+D CT+ G+PLPNVTA VL+KV+EY+K
Sbjct: 7   NGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFK 66

Query: 433 HHVG-------------KSETDKDAREFDRDFVKDTSSSMLFDVIMAANYLDCKPLLDLT 293
            H               K++ +++ + FD +FV D   +MLF++I+AAN+L+ + LLDLT
Sbjct: 67  KHAAVTPKPATEAVAADKAKREEELKSFDAEFV-DVDRTMLFELILAANFLNAQDLLDLT 125

Query: 292 CQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 164
           CQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 126 CQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>gb|EAZ06798.1| hypothetical protein OsI_29042 [Oryza sativa Indica Group]
          Length = 169

 Score =  161 bits (407), Expect = 2e-37
 Identities = 81/163 (49%), Positives = 115/163 (70%), Gaps = 13/163 (7%)
 Frame = -2

Query: 613 SAQRKILLKSAEGEEFLVDELLARGSKMISNVIDDGCTEGGIPLPNVTAPVLSKVLEYWK 434
           + ++ ILL S++GE F + E  A  SK +S++I+D CT+ G+PLPNVTA VL+KV+EY+K
Sbjct: 7   NGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFK 66

Query: 433 HHVG-------------KSETDKDAREFDRDFVKDTSSSMLFDVIMAANYLDCKPLLDLT 293
            H               K++ +K+ + FD +FV D   +ML ++I+AAN+L+ + LLDLT
Sbjct: 67  KHAAVTPKTATEAVAADKAKREKELKSFDAEFV-DVDRTMLLELILAANFLNAQDLLDLT 125

Query: 292 CQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 164
           CQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 126 CQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>dbj|BAD05286.1| putative SKP1 [Oryza sativa Japonica Group]
           gi|125603222|gb|EAZ42547.1| hypothetical protein
           OsJ_27113 [Oryza sativa Japonica Group]
          Length = 169

 Score =  160 bits (406), Expect = 2e-37
 Identities = 81/163 (49%), Positives = 115/163 (70%), Gaps = 13/163 (7%)
 Frame = -2

Query: 613 SAQRKILLKSAEGEEFLVDELLARGSKMISNVIDDGCTEGGIPLPNVTAPVLSKVLEYWK 434
           + ++ ILL S++GE F + E  A  SK +S++I+D CT+ G+PLPNVTA VL KV+EY+K
Sbjct: 7   NGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVKVVEYFK 66

Query: 433 HHVG-------------KSETDKDAREFDRDFVKDTSSSMLFDVIMAANYLDCKPLLDLT 293
            H               K++ +++ + FD +FV D   +MLF++I+AAN+L+ + LLDLT
Sbjct: 67  KHAAVTPKPATEAVVADKAKREEELKSFDAEFV-DVDRTMLFELILAANFLNAQDLLDLT 125

Query: 292 CQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 164
           CQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 126 CQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>ref|NP_001061672.1| Os08g0375700 [Oryza sativa Japonica Group]
           gi|27260972|dbj|BAC45089.1| putative SKP1-like protein
           [Oryza sativa Japonica Group] gi|33243056|gb|AAQ01198.1|
           SKP1 [Oryza sativa Japonica Group]
           gi|40253356|dbj|BAD05288.1| putative SKP1-like protein
           [Oryza sativa Japonica Group]
           gi|113623641|dbj|BAF23586.1| Os08g0375700 [Oryza sativa
           Japonica Group] gi|125603221|gb|EAZ42546.1| hypothetical
           protein OsJ_27112 [Oryza sativa Japonica Group]
          Length = 169

 Score =  160 bits (406), Expect = 2e-37
 Identities = 80/163 (49%), Positives = 116/163 (71%), Gaps = 13/163 (7%)
 Frame = -2

Query: 613 SAQRKILLKSAEGEEFLVDELLARGSKMISNVIDDGCTEGGIPLPNVTAPVLSKVLEYWK 434
           + ++ ILL S++GE F + E  A  SK +S++I+D CT+ G+PLPNVTA VL+KV+EY+K
Sbjct: 7   NGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFK 66

Query: 433 HHVG-------------KSETDKDAREFDRDFVKDTSSSMLFDVIMAANYLDCKPLLDLT 293
            H               K++ +++ + FD +FV D   +M+F++I+AAN+L+ + LLDLT
Sbjct: 67  KHAAVTPKPATEAVAADKAKREEELKSFDAEFV-DVDRTMVFELILAANFLNAQDLLDLT 125

Query: 292 CQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 164
           CQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 126 CQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


Top