BLASTX nr result

ID: Dioscorea21_contig00010784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010784
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...    74   1e-11
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...    74   1e-11
gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare]                       73   2e-11
gb|ACA29442.1| SNF2P [Hordeum vulgare subsp. vulgare]                  73   2e-11
gb|ACA29439.1| SNF2P [Hordeum vulgare subsp. vulgare] gi|1688093...    73   2e-11

>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 1-like [Cucumis sativus]
          Length = 867

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 1   IGYQDGSHRSEWYTVERLLRKYASIHGIKIYVYYFRRPS 117
           IGYQDGS RSEWYTVERLLRKYASI+ +KIYVYY+RR S
Sbjct: 829 IGYQDGSDRSEWYTVERLLRKYASIYNVKIYVYYYRRTS 867


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Cucumis sativus]
          Length = 868

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 1   IGYQDGSHRSEWYTVERLLRKYASIHGIKIYVYYFRRPS 117
           IGYQDGS RSEWYTVERLLRKYASI+ +KIYVYY+RR S
Sbjct: 830 IGYQDGSDRSEWYTVERLLRKYASIYNVKIYVYYYRRTS 868


>gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare]
          Length = 882

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +1

Query: 1   IGYQDGSHRSEWYTVERLLRKYASIHGIKIYVYYFRRPSKE 123
           IG + GS RSEWYT+ERLLRKYAS+HGI I+VYYFRRPS++
Sbjct: 837 IGQRSGSQRSEWYTIERLLRKYASLHGIDIFVYYFRRPSRQ 877


>gb|ACA29442.1| SNF2P [Hordeum vulgare subsp. vulgare]
          Length = 87

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +1

Query: 1   IGYQDGSHRSEWYTVERLLRKYASIHGIKIYVYYFRRPSKE 123
           IG + GS RSEWYT+ERLLRKYAS+HGI I+VYYFRRPS++
Sbjct: 42  IGQRSGSQRSEWYTIERLLRKYASLHGIDIFVYYFRRPSRQ 82


>gb|ACA29439.1| SNF2P [Hordeum vulgare subsp. vulgare] gi|168809369|gb|ACA29441.1|
           SNF2P [Hordeum vulgare subsp. vulgare]
          Length = 87

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +1

Query: 1   IGYQDGSHRSEWYTVERLLRKYASIHGIKIYVYYFRRPSKE 123
           IG + GS RSEWYT+ERLLRKYAS+HGI I+VYYFRRPS++
Sbjct: 42  IGQRSGSQRSEWYTIERLLRKYASLHGIDIFVYYFRRPSRQ 82


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