BLASTX nr result

ID: Dioscorea21_contig00010740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010740
         (1724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455470.1| hypothetical protein SORBIDRAFT_03g011420 [S...   477   e-132
tpg|DAA54206.1| TPA: cyclin-like F-box [Zea mays]                     471   e-130
ref|NP_001151624.1| cyclin-like F-box [Zea mays] gi|195648178|gb...   468   e-129
ref|NP_001042756.1| Os01g0281000 [Oryza sativa Japonica Group] g...   465   e-128
ref|XP_003567352.1| PREDICTED: F-box protein At2g32560-like [Bra...   459   e-127

>ref|XP_002455470.1| hypothetical protein SORBIDRAFT_03g011420 [Sorghum bicolor]
            gi|241927445|gb|EES00590.1| hypothetical protein
            SORBIDRAFT_03g011420 [Sorghum bicolor]
          Length = 408

 Score =  477 bits (1228), Expect = e-132
 Identities = 219/314 (69%), Positives = 260/314 (82%), Gaps = 7/314 (2%)
 Frame = +2

Query: 542  PSVLDLPELALDMVLGKLSPAGLSSMSCVCKSLRETCRSDHMWEKHMKAKWGRLIGKAAQ 721
            PSVLDLPELA+D +L +L PA L SM+ VC+S+RE CRSDH+WE+HM +KWGR++G+AA+
Sbjct: 94   PSVLDLPELAIDCILERLQPAELRSMAAVCRSMRERCRSDHLWERHMTSKWGRVLGRAAR 153

Query: 722  RQWDLCMALRNQSLCKAKGKG------FFARLSRVLPL-HLIKSRIDGGAKSKGVFFPDA 880
             +W   +A  ++S   + G G      + A LS V P+   ++ R DGG  S  V   D 
Sbjct: 154  DEWRTHVASASESGAVSGGGGGGKRRRWLAALSCVCPVVSWMRPRPDGGKSSAPVL--DD 211

Query: 881  SIMSWYLSLENGKFWFPAQVYNREHGHVGFMLSCYDAEVSYDCHTDTFRARYPPHGRRTV 1060
            SIMSWYLS+E+GKFWFPAQVYNREHGHVGFM+SCYDAE+SYD HTDTFRARYPPHGRRTV
Sbjct: 212  SIMSWYLSMESGKFWFPAQVYNREHGHVGFMMSCYDAELSYDFHTDTFRARYPPHGRRTV 271

Query: 1061 VIEEGVQWERLRASPVETSAHELHISDCLHELLPGDHIEIQWRRNKEFPYGWWYGVVGHL 1240
            V+E+GV W+R+RA PV+T AH+LH SDCLHEL PGDHIEIQWRRNKEFPYGWWYGVVGHL
Sbjct: 272  VLEDGVHWDRIRAPPVDTLAHDLHTSDCLHELRPGDHIEIQWRRNKEFPYGWWYGVVGHL 331

Query: 1241 ESCDGSEYHCRCHNSDTIMLEFNQYTPGSRWRQAAVNRKNHREEGNETDGFYGGIRKLKS 1420
            ESCDG+E+ CRCH SDT++LEFNQYTPGSRWRQA VNRK HREEGNE DGFYGG+RKL+S
Sbjct: 332  ESCDGNEHFCRCHLSDTVVLEFNQYTPGSRWRQALVNRKEHREEGNEGDGFYGGVRKLRS 391

Query: 1421 KDEINMWKQLWPTD 1462
            KD+I+ W+QLWPTD
Sbjct: 392  KDDISKWRQLWPTD 405


>tpg|DAA54206.1| TPA: cyclin-like F-box [Zea mays]
          Length = 404

 Score =  471 bits (1211), Expect = e-130
 Identities = 221/346 (63%), Positives = 265/346 (76%), Gaps = 4/346 (1%)
 Frame = +2

Query: 437  THWLDLVPSLNLSIKMPSKRRSQSEGENEGENDMFPSVLDLPELALDMVLGKLSPAGLSS 616
            T  + L+PS        +   ++      G  +   SVLDLPELA+D +L KL PA L S
Sbjct: 60   TETMPLMPSFKRKRAAATVENAEEAAATAGGGET--SVLDLPELAIDCILEKLRPAELRS 117

Query: 617  MSCVCKSLRETCRSDHMWEKHMKAKWGRLIGKAAQRQWDLCMALRNQSLCKAKG---KGF 787
            M+ VC+S+RE CR DH+WE+HM  +WGR++G+AA+ +W   +A  ++S     G   + +
Sbjct: 118  MAAVCRSMRERCRGDHLWERHMTNRWGRVLGRAARDEWRTHLASASESRAAGGGGKRRKW 177

Query: 788  FARLSRVLPL-HLIKSRIDGGAKSKGVFFPDASIMSWYLSLENGKFWFPAQVYNREHGHV 964
             A LS V P+   ++ R DGG  S  V   D SIMSWYLS+E+GKFWFPAQVYNREHGHV
Sbjct: 178  LAALSCVCPVVSWMRPRADGGKSSAPVL--DDSIMSWYLSVESGKFWFPAQVYNREHGHV 235

Query: 965  GFMLSCYDAEVSYDCHTDTFRARYPPHGRRTVVIEEGVQWERLRASPVETSAHELHISDC 1144
            GFM+SCYDA +SYD HTDTFRARYPPHGRRTVV+E+GVQW+R+RA PV+T AH+LH SDC
Sbjct: 236  GFMMSCYDAALSYDFHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTLAHDLHTSDC 295

Query: 1145 LHELLPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEYHCRCHNSDTIMLEFNQYTPG 1324
            LHEL PGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSE+ CRCH SDT++LEFNQYTPG
Sbjct: 296  LHELRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEHFCRCHLSDTVVLEFNQYTPG 355

Query: 1325 SRWRQAAVNRKNHREEGNETDGFYGGIRKLKSKDEINMWKQLWPTD 1462
            SRWRQA V RK HREEGNE DGFYGGIRKL+ KD+I+ W+QLWPTD
Sbjct: 356  SRWRQALVKRKEHREEGNEGDGFYGGIRKLRGKDDISKWRQLWPTD 401


>ref|NP_001151624.1| cyclin-like F-box [Zea mays] gi|195648178|gb|ACG43557.1| cyclin-like
            F-box [Zea mays]
          Length = 407

 Score =  468 bits (1204), Expect = e-129
 Identities = 221/349 (63%), Positives = 263/349 (75%), Gaps = 7/349 (2%)
 Frame = +2

Query: 437  THWLDLVPSLNLSIKMPSKRRSQSEGENEGENDMFPSVLDLPELALDMVLGKLSPAGLSS 616
            T  + L+PS        +   ++      G  +   SVLDLPELA+D +L KL PA L S
Sbjct: 60   TETMPLMPSFKRKRASATVENAEEAAATAGGGET--SVLDLPELAIDCILEKLRPAELRS 117

Query: 617  MSCVCKSLRETCRSDHMWEKHMKAKWGRLIGKAAQRQWDLCMALRNQSLCKAKGKG---- 784
            M+ VC+S+RE CR DH+WE+HM  +WGR++G+AA+ +W   +A  ++S     G G    
Sbjct: 118  MAAVCRSMRERCRGDHLWERHMTNRWGRVLGRAARDEWRTHLASASESRAAGGGGGGGKR 177

Query: 785  --FFARLSRVLPL-HLIKSRIDGGAKSKGVFFPDASIMSWYLSLENGKFWFPAQVYNREH 955
              + A LS V P+   ++ R DGG  S  V   D SIMSWYLS+E+GKFWFPAQVYNREH
Sbjct: 178  RRWLAALSCVCPVVSWMRPRADGGKSSAPVL--DDSIMSWYLSVESGKFWFPAQVYNREH 235

Query: 956  GHVGFMLSCYDAEVSYDCHTDTFRARYPPHGRRTVVIEEGVQWERLRASPVETSAHELHI 1135
            GHVGFM+SCYDA +SYD HTDTFRARYPPHGRRTVV+E+GVQW+R+RA PV+T AH LH 
Sbjct: 236  GHVGFMMSCYDAALSYDLHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTLAHYLHT 295

Query: 1136 SDCLHELLPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEYHCRCHNSDTIMLEFNQY 1315
            SDCLHEL PGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSE+ CRCH SDT++LEFNQY
Sbjct: 296  SDCLHELRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEHFCRCHLSDTVVLEFNQY 355

Query: 1316 TPGSRWRQAAVNRKNHREEGNETDGFYGGIRKLKSKDEINMWKQLWPTD 1462
            TPGSRWRQA V RK HREEGNE DGFYGGIRKL+  D+I+ W+QLWPTD
Sbjct: 356  TPGSRWRQALVKRKEHREEGNEGDGFYGGIRKLRGNDDISKWRQLWPTD 404


>ref|NP_001042756.1| Os01g0281000 [Oryza sativa Japonica Group] gi|6498442|dbj|BAA87845.1|
            unknown protein [Oryza sativa Japonica Group]
            gi|11041564|dbj|BAB00648.2| unnamed protein product
            [Oryza sativa Japonica Group] gi|11138071|dbj|BAB17744.1|
            OSJNBa0036E02.18 [Oryza sativa Japonica Group]
            gi|13873014|dbj|BAB44118.1| unknown protein [Oryza sativa
            Japonica Group] gi|113532287|dbj|BAF04670.1| Os01g0281000
            [Oryza sativa Japonica Group]
            gi|215694300|dbj|BAG89293.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 415

 Score =  465 bits (1196), Expect = e-128
 Identities = 223/349 (63%), Positives = 267/349 (76%), Gaps = 22/349 (6%)
 Frame = +2

Query: 482  MPSKRRSQSEGENEG----------ENDMFPSVLDLPELALDMVLGKLSPAGLSSMSCVC 631
            MPS +R ++    EG          E    PSVLDLPELA++ +L +L P+ L +M+ VC
Sbjct: 65   MPSFKRKRAAAVEEGGGGGGGGGGEEAGGEPSVLDLPELAIECILARLPPSELRNMAGVC 124

Query: 632  KSLRETCRSDHMWEKHMKAKWGRLIGKAAQRQWDLCMALRNQS-----LCKAKGKG---- 784
            +S+RE CR DH+WE+HM  KWG ++G AA+ +W   +A    +      C   G G    
Sbjct: 125  RSMRERCRGDHLWERHMSEKWGGVLGHAAREEWRTYLASAADTGGAAASCSLAGGGRHRR 184

Query: 785  FFARLSRVLPL-HLIKSRIDGGA--KSKGVFFPDASIMSWYLSLENGKFWFPAQVYNREH 955
            + A LS V P+   ++ R DGG+  KS G    D SIMSWYLS+E+GKFWFPAQVYNREH
Sbjct: 185  WLAALSCVCPVVSWMRPRADGGSGGKSAGPVLDD-SIMSWYLSMESGKFWFPAQVYNREH 243

Query: 956  GHVGFMLSCYDAEVSYDCHTDTFRARYPPHGRRTVVIEEGVQWERLRASPVETSAHELHI 1135
            GHVGFM+SCYDAE+SYD H+DTFRARYPPHGRRTVV+E+GV W+R+RA PV+T AH+LH 
Sbjct: 244  GHVGFMMSCYDAELSYDFHSDTFRARYPPHGRRTVVLEDGVHWDRVRAPPVDTHAHDLHA 303

Query: 1136 SDCLHELLPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEYHCRCHNSDTIMLEFNQY 1315
            SDCLHEL PGD+IEIQWRRNKEFPYGWWYGVVGHLESCDGSE+ CRCH SDT++LEFNQY
Sbjct: 304  SDCLHELRPGDNIEIQWRRNKEFPYGWWYGVVGHLESCDGSEHFCRCHLSDTVVLEFNQY 363

Query: 1316 TPGSRWRQAAVNRKNHREEGNETDGFYGGIRKLKSKDEINMWKQLWPTD 1462
            TPGSRWRQA VNRK+HREEGNE DGFYGGIRKL+SKDEI+ W+QLWPTD
Sbjct: 364  TPGSRWRQALVNRKDHREEGNEGDGFYGGIRKLRSKDEISKWRQLWPTD 412


>ref|XP_003567352.1| PREDICTED: F-box protein At2g32560-like [Brachypodium distachyon]
          Length = 411

 Score =  459 bits (1182), Expect = e-127
 Identities = 220/341 (64%), Positives = 265/341 (77%), Gaps = 14/341 (4%)
 Frame = +2

Query: 482  MPSKRRSQSEGENEG-ENDMFPSVLDLPELALDMVLGKLSPAGLSSMSCVCKSLRETCRS 658
            MPS +R +   + E  E    PS+LDLPEL +D +L +L PA L +M+ VC+S+R+ CR+
Sbjct: 69   MPSFKRKRPVAKVESAEATGDPSLLDLPELTIDCILARLPPAELRNMAAVCRSMRDRCRA 128

Query: 659  DHMWEKHMKAKWGRLIGKAAQRQWDLCMALRNQSL-------CKAKG----KGFFARLSR 805
            DH+WE HM  KWG ++G AA+ +W   ++  + +        C + G    + + A LS 
Sbjct: 129  DHLWESHMSDKWGPVMGAAAREEWRSYLSSSSAADGGGGAAGCGSGGGVKRRRWLAALSC 188

Query: 806  VLPL-HLIKSRIDGGA-KSKGVFFPDASIMSWYLSLENGKFWFPAQVYNREHGHVGFMLS 979
            V P+   I+ R DGGA KS G    D S+MSWYL +E+GKFWFPAQVYNREHGHVGFM+S
Sbjct: 189  VCPVVSWIRPRADGGAGKSAGPVLDD-SVMSWYLHMESGKFWFPAQVYNREHGHVGFMMS 247

Query: 980  CYDAEVSYDCHTDTFRARYPPHGRRTVVIEEGVQWERLRASPVETSAHELHISDCLHELL 1159
            CYDAE+SYD HTDTFRARYPPHGRRTVV+E+GVQW+R+RA PV+T AH+LH+SDCLHEL 
Sbjct: 248  CYDAELSYDFHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTLAHDLHVSDCLHELR 307

Query: 1160 PGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGSEYHCRCHNSDTIMLEFNQYTPGSRWRQ 1339
            PGD IEIQWRRNKEFPYGWWYGVVGHLESCDG+E+ CRCH SDTI+LEFNQYTPGSRWRQ
Sbjct: 308  PGDSIEIQWRRNKEFPYGWWYGVVGHLESCDGNEHFCRCHLSDTIVLEFNQYTPGSRWRQ 367

Query: 1340 AAVNRKNHREEGNETDGFYGGIRKLKSKDEINMWKQLWPTD 1462
            + VNRK+HREEGNE DGFYGGIRKL SKDEI+ WKQLWP D
Sbjct: 368  SLVNRKDHREEGNEGDGFYGGIRKLHSKDEISKWKQLWPID 408


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