BLASTX nr result

ID: Dioscorea21_contig00010703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010703
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   7e-10
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    67   6e-09
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    66   1e-08
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]    65   2e-08
emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]    64   4e-08

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
 Frame = +3

Query: 495 LNILGWNCRGTTGKDKINRVRRIIKENHIDILAMVETRANGDRVFRFCSQFARTWNGVAI 674
           + I+ WN +G     K+  +R +++ N+  +LA+VET  +GD+  R C +   +     +
Sbjct: 3   IKIMVWNVQGVG--TKLTILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQ-TRV 59

Query: 675 PANGYSGGIIILWIKQLGKISPVVHSCRALHLIFSSSADHPWIISVVYNAQHIKLQKKLW 854
            A G+ GGI + W  +   ++P     + L +      D PW+ S +Y +    L+K+LW
Sbjct: 60  EAEGFRGGIWLFWKSEEVTVTPYGSHSQHLTVEIRRIGDDPWLFSAIYASPDSTLRKELW 119

Query: 855 KELSLI-TKLNLPWIV 899
           +EL  I  +   PW++
Sbjct: 120 RELEQIKNQYTGPWLL 135


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +3

Query: 495 LNILGWNCRGTTGKDKINRVRRIIKENHIDILAMVETRANGDRVFRFCSQFARTWNGVAI 674
           +N L WNCRG         +R ++K+   D+LA+ ET A GDR  R C +     N   +
Sbjct: 508 MNCLLWNCRGPNKPIFRRSIRYVLKKFDTDVLALFETHAGGDRAGRICQRLGFE-NQFRV 566

Query: 675 PANGYSGGIIILWIKQLGKISPVVHSCRALHLIFSSSADHPWIISVVYNAQHIKLQKKLW 854
            A G S G+ +LW   +G +  V  + + +H    +  +   ++ VVY A  +  +  LW
Sbjct: 567 DAVGQSSGLWLLWRSSVGNVEIVSSTSQFIHAKILTGLESVHLV-VVYAAPSVSRRSGLW 625

Query: 855 KEL-SLITKLNLPWIV 899
            EL   ++ L+ P I+
Sbjct: 626 NELREAVSGLDGPLII 641


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
 Frame = +3

Query: 495 LNILGWNCRGTTGKDKINRVRRIIKENHIDILAMVETRANGDRVFRFCSQFARTWNGVAI 674
           +N L WNCRG    +    +R I+K+ + DILA+ ET A GDR  R C Q     N   +
Sbjct: 1   MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSC-QGLGFENSFRV 59

Query: 675 PANGYSGGIIILWIKQLGKISPVVHSCRALHLIFSSSADHPWIISVVYNAQHIKLQKKLW 854
              G SGG+ +LW  ++G+++ V  S + +H    +  +   +++ VY A     +  LW
Sbjct: 60  DVVGQSGGLWLLWKAEVGEVTIVNSSSQFIHARIVNGVEALHLVT-VYAAPSASRRSGLW 118

Query: 855 KEL-SLITKLNLPWIV 899
           ++L  ++  ++ P I+
Sbjct: 119 EKLRDVVQAIDEPLII 134


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +3

Query: 495  LNILGWNCRGTTGKDKINRVRRIIKENHIDILAMVETRANGDRVFRFCSQFARTWNGVAI 674
            + I+ WN RG   K K   V+  ++    D++ + ET+   DR F      AR  +  A+
Sbjct: 754  MKIISWNTRGLGSKKKRRVVKXFLRSEKPDVVMIQETKKECDRRFVGSVWTARNKDWAAL 813

Query: 675  PANGYSGGIIILWIKQLGKISPVVHSCRALHLIFSSSADHPWIISVVYNAQHIKLQKKLW 854
            PA+G SGGI+I+W  +      VV    ++ + F+        +S VY   +  L+K  W
Sbjct: 814  PASGASGGILIIWEAKKLCREEVVLGSFSVSIKFALDGCESLWLSAVYGPNNSTLRKDFW 873

Query: 855  KELSLITKLNLP-WIV 899
             ELS I  L  P W V
Sbjct: 874  VELSDIVGLAYPRWCV 889


>emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 495 LNILGWNCRGTTGKDKINRVRRIIKENHIDILAMVETRA-NGDRVFRFCSQFARTWNGVA 671
           + I+ WN RG   ++K   V+  ++  + D++ + ET+  N DR F       R  + VA
Sbjct: 63  MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 122

Query: 672 IPANGYSGGIIILWIKQLGKISPVVHSCRALHLIFSSSADHPWIISVVYNAQHIKLQKKL 851
           +P +G SGGI+I+W  +  +   VV    ++ + FS     P  IS VY      L+K  
Sbjct: 123 LPXSGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 182

Query: 852 WKELSLITKLNLP-WIV 899
           W EL  I  L  P W V
Sbjct: 183 WVELFDIYGLTYPLWCV 199


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