BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010686
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding pro...   226   1e-79
sp|P08823.1|RUBA_WHEAT RecName: Full=RuBisCO large subunit-bindi...   228   5e-73
ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [S...   229   5e-58
ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group] g...   228   1e-57
gb|AFW77798.1| chloroplast protein synthesis2 [Zea mays]              228   1e-57

>ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Brachypodium distachyon]
          Length = 578

 Score =  226 bits (577), Expect(2) = 1e-79
 Identities = 121/156 (77%), Positives = 128/156 (82%)
 Frame = -1

Query: 469 HPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVASGANPVSLKKGIDKT 290
           +PMENAGAALIREVASKTNDSAGDGTTTA VLAREIIKLG+LSV SGANPVSLKKGIDKT
Sbjct: 99  NPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKT 158

Query: 289 VQGLVEELEIRARPVKGRGDIIAVASISAGNDEFIGNMIADAIDKVGPDGXXXXXXXXXX 110
           VQGL+ ELE +ARPVKG GDI AVASISAGNDE IG+MIADAIDKVGPDG          
Sbjct: 159 VQGLIAELENKARPVKGSGDIKAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSF 218

Query: 109 XXXXXXXEGMEIDKGYISPQFANNTEKMLVEFENAR 2
                  EGMEID+GYISPQF  N EK +VEFENAR
Sbjct: 219 ETTVDVEEGMEIDRGYISPQFVTNLEKSVVEFENAR 254



 Score = 97.1 bits (240), Expect(2) = 1e-79
 Identities = 57/91 (62%), Positives = 64/91 (70%)
 Frame = -3

Query: 860 MATTNAISTASIFRHPHRQEGLRRKGWVGQVPLRLVRSNGWQRMVVRAAAKDIAFDQTSR 681
           MA+ NAISTAS+ R    Q  +RR            R+   QR+VVRA AKDIAFDQ SR
Sbjct: 1   MASANAISTASLLRSFSSQGRVRRS-----------RNGRAQRLVVRADAKDIAFDQKSR 49

Query: 680 RYLQAGVEKLADAVGVTLGPRGRNVVLDEFG 588
             LQAGVEKLA+AVGVTLGPRGRNVVLDE+G
Sbjct: 50  AALQAGVEKLANAVGVTLGPRGRNVVLDEYG 80


>sp|P08823.1|RUBA_WHEAT RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
           gi|1345582|emb|CAA30699.1| unnamed protein product
           [Triticum aestivum]
          Length = 543

 Score =  228 bits (581), Expect(2) = 5e-73
 Identities = 122/156 (78%), Positives = 128/156 (82%)
 Frame = -1

Query: 469 HPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVASGANPVSLKKGIDKT 290
           +PMENAGAALIREVASKTNDSAGDGTTTA VLAREIIKLG+LSV SGANPVSLKKGIDKT
Sbjct: 64  NPMENAGAALIREVASKTNDSAGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKT 123

Query: 289 VQGLVEELEIRARPVKGRGDIIAVASISAGNDEFIGNMIADAIDKVGPDGXXXXXXXXXX 110
           VQGL+EELE +ARPVKG GDI AVASISAGNDE IG MIADAIDKVGPDG          
Sbjct: 124 VQGLIEELERKARPVKGSGDIKAVASISAGNDELIGAMIADAIDKVGPDGVLSIESSSSF 183

Query: 109 XXXXXXXEGMEIDKGYISPQFANNTEKMLVEFENAR 2
                  EGMEID+GYISPQF  N EK +VEFENAR
Sbjct: 184 ETTVDVEEGMEIDRGYISPQFVTNLEKSIVEFENAR 219



 Score = 73.6 bits (179), Expect(2) = 5e-73
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -3

Query: 719 AAAKDIAFDQTSRRYLQAGVEKLADAVGVTLGPRGRNVVLDEFG 588
           A AK+IAFDQ SR  LQAGVEKLA+AVGVTLGPRGRNVVLDE+G
Sbjct: 2   ADAKEIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYG 45


>ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [Sorghum bicolor]
           gi|241946172|gb|EES19317.1| hypothetical protein
           SORBIDRAFT_09g014430 [Sorghum bicolor]
          Length = 577

 Score =  229 bits (585), Expect = 5e-58
 Identities = 122/155 (78%), Positives = 130/155 (83%)
 Frame = -1

Query: 466 PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVASGANPVSLKKGIDKTV 287
           PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSV SGANPVSLKKGIDKTV
Sbjct: 99  PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTV 158

Query: 286 QGLVEELEIRARPVKGRGDIIAVASISAGNDEFIGNMIADAIDKVGPDGXXXXXXXXXXX 107
           QGL++ELE +ARPVKG GDI AVASISAGNDEFIG+MIA+AIDKVGPDG           
Sbjct: 159 QGLIQELENKARPVKGGGDIKAVASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFE 218

Query: 106 XXXXXXEGMEIDKGYISPQFANNTEKMLVEFENAR 2
                 EGMEID+GYISPQF  N EK +VEFENA+
Sbjct: 219 TTVEVEEGMEIDRGYISPQFVTNLEKSIVEFENAK 253



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 57/91 (62%), Positives = 62/91 (68%)
 Frame = -3

Query: 860 MATTNAISTASIFRHPHRQEGLRRKGWVGQVPLRLVRSNGWQRMVVRAAAKDIAFDQTSR 681
           MA+ NAISTAS+   P  Q   RR            R+   QR VVRA AKDIAFDQ SR
Sbjct: 1   MASANAISTASLIS-PLSQGRARR-----------ARNGRSQRFVVRAEAKDIAFDQKSR 48

Query: 680 RYLQAGVEKLADAVGVTLGPRGRNVVLDEFG 588
             LQAGVEKLA+AVGVTLGPRGRNVVLDE+G
Sbjct: 49  AALQAGVEKLANAVGVTLGPRGRNVVLDEYG 79


>ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group]
           gi|77554291|gb|ABA97087.1| RuBisCO subunit
           binding-protein alpha subunit, chloroplast precursor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649074|dbj|BAF29586.1| Os12g0277500 [Oryza sativa
           Japonica Group] gi|125536273|gb|EAY82761.1| hypothetical
           protein OsI_37967 [Oryza sativa Indica Group]
           gi|313575777|gb|ADR66968.1| 60 kDa chaperonin alpha
           subunit [Oryza sativa Japonica Group]
          Length = 578

 Score =  228 bits (582), Expect = 1e-57
 Identities = 122/155 (78%), Positives = 128/155 (82%)
 Frame = -1

Query: 466 PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVASGANPVSLKKGIDKTV 287
           PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSV SGANPVSLKKGIDKTV
Sbjct: 100 PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTV 159

Query: 286 QGLVEELEIRARPVKGRGDIIAVASISAGNDEFIGNMIADAIDKVGPDGXXXXXXXXXXX 107
            GL+EELE +ARPVKG GDI AVASISAGNDE IG+MIADAIDKVGPDG           
Sbjct: 160 HGLIEELEKKARPVKGSGDIKAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFE 219

Query: 106 XXXXXXEGMEIDKGYISPQFANNTEKMLVEFENAR 2
                 EGMEID+GYISPQF  N EK +VEFENA+
Sbjct: 220 TTVDVEEGMEIDRGYISPQFVTNLEKSIVEFENAK 254



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 56/91 (61%), Positives = 64/91 (70%)
 Frame = -3

Query: 860 MATTNAISTASIFRHPHRQEGLRRKGWVGQVPLRLVRSNGWQRMVVRAAAKDIAFDQTSR 681
           MA+ NAISTAS+ R    Q  +RR            ++   QR+VVRA AKDIAFDQ SR
Sbjct: 1   MASANAISTASLLRSFSSQGRVRR-----------AKNGRAQRLVVRADAKDIAFDQKSR 49

Query: 680 RYLQAGVEKLADAVGVTLGPRGRNVVLDEFG 588
             LQAGVEKLA+AVGVTLGPRGRNVVLDE+G
Sbjct: 50  AALQAGVEKLANAVGVTLGPRGRNVVLDEYG 80


>gb|AFW77798.1| chloroplast protein synthesis2 [Zea mays]
          Length = 593

 Score =  228 bits (582), Expect = 1e-57
 Identities = 121/155 (78%), Positives = 130/155 (83%)
 Frame = -1

Query: 466 PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVASGANPVSLKKGIDKTV 287
           PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSV SGANPVSLKKGIDKTV
Sbjct: 94  PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTV 153

Query: 286 QGLVEELEIRARPVKGRGDIIAVASISAGNDEFIGNMIADAIDKVGPDGXXXXXXXXXXX 107
           QGL++ELE ++RPVKG GDI AVASISAGNDEFIG+MIA+AIDKVGPDG           
Sbjct: 154 QGLIQELENKSRPVKGGGDIKAVASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFE 213

Query: 106 XXXXXXEGMEIDKGYISPQFANNTEKMLVEFENAR 2
                 EGMEID+GYISPQF  N EK +VEFENA+
Sbjct: 214 TTVEVEEGMEIDRGYISPQFVTNLEKSIVEFENAK 248



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 56/91 (61%), Positives = 61/91 (67%)
 Frame = -3

Query: 860 MATTNAISTASIFRHPHRQEGLRRKGWVGQVPLRLVRSNGWQRMVVRAAAKDIAFDQTSR 681
           MA+ NAISTAS+ R                 PL   R+   QR VVRA AKDIAFDQ SR
Sbjct: 1   MASANAISTASLLR-----------------PLSQGRATRSQRFVVRANAKDIAFDQKSR 43

Query: 680 RYLQAGVEKLADAVGVTLGPRGRNVVLDEFG 588
             LQAGVEKLA+AVGVTLGPRGRNVVLDE+G
Sbjct: 44  AALQAGVEKLANAVGVTLGPRGRNVVLDEYG 74