BLASTX nr result
ID: Dioscorea21_contig00010669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00010669
(3514 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 1452 0.0
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 1427 0.0
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein... 1412 0.0
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein... 1396 0.0
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 1392 0.0
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 1452 bits (3758), Expect = 0.0
Identities = 720/946 (76%), Positives = 829/946 (87%), Gaps = 2/946 (0%)
Frame = +1
Query: 1 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD 180
ALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++QFRQILEEGSSPEIDEYYAD
Sbjct: 18 ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFRQILEEGSSPEIDEYYAD 77
Query: 181 VKYERIAILNALGAYHTYLGKIETNRREKEEHFAAATDYYNRAARIDPYESSTWIGKGQL 360
V+YERIAILNALGAY++YLGKIET +REKEEHF AT YYN+A+RID +E+STW+GKGQL
Sbjct: 78 VRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEASTWVGKGQL 137
Query: 361 CVARGELSKASDNFKIVLDTDPNSVPALVAKACIEFNNGENEDQYKKASESYKSSLELFK 540
+A+G++ +A FKIVLD D ++VPAL+ +AC+EFN G Y SL+L+K
Sbjct: 138 LLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGR-----------YSDSLDLYK 186
Query: 541 KALQIHPGCPAAVRLGIGLCRYRLGQFEKARQAFQRVLQLDPENVEALVALGIMDLQSSE 720
+ALQ++P CPAAVR+GIGLC Y+LGQFEKAR+AFQRVLQLDPENVEALVALGIMDL +++
Sbjct: 187 RALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIMDLHTND 246
Query: 721 VHGIWKGTEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSNHKLMKAH 900
GI KG EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV+NH K+H
Sbjct: 247 ASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
Query: 901 SYYNLARSYHSKGDFDKAARYYMASVKEINRPQDFVLPYYGLGQVQLKLGDLRSALSSFE 1080
SYYNLARSYHSKGD++KA YYMASVKE N+P DFVLPYYGLGQVQLKLGD RS+LS+FE
Sbjct: 307 SYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFE 366
Query: 1081 KVLEIHPENCDSLKAVGHIYVQLGQNDKALETFRKAARIDPKDAQAFMELGELLTSSDAV 1260
KVLE++PENC++LKA+GHIYVQLGQ +KA E RKA +IDP+DAQAF++LGELL +SD
Sbjct: 367 KVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLITSDTG 426
Query: 1261 AALDALKTARTLIKKGGEEVPVELLNNIGVLYFERGEFEFAEQTFKEALGEGIWLSLLDG 1440
AALDA KTAR L+KKGGEEVP+ELLNNIGVLYFERGEFE AEQTFKEA+G+GIWLS +D
Sbjct: 427 AALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFIDD 486
Query: 1441 Q--NSVMDPSAYSVQYKDFTLFHQLEENGTALDLPWDKVTTMFNYARLFEQLHDSEKASI 1614
+ + D +KD LFHQLEE+G ++LPW+KVT +FN ARL EQL++++ ASI
Sbjct: 487 KAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASI 546
Query: 1615 LYRLILFKYPEYIDAYLRLAAMAKARNNIQLSIELIGEALKIDDKCPNALSMLGNLELKS 1794
LYRLILFK+P+YIDAYLRLAA+AKARNNIQLSIEL+G+ALK++DK PN+L MLG+LELK+
Sbjct: 547 LYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLGDLELKN 606
Query: 1795 DDWVKAKDTFRAAKDATDGKDSYATLCLGNWNYYAAMRSEKRGPKLEATHLEKAKELYTK 1974
DDWVKAK+TFR+A DATDGKDSYATL LGNWNY+AA+RSEKR PKLEATHLEKAKELYT+
Sbjct: 607 DDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKAKELYTR 666
Query: 1975 VLMLRHGNLYAANGAGIVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYFA 2154
VL+ + NLYAANGAG+VLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINLAHVYFA
Sbjct: 667 VLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFA 726
Query: 2155 QGHFALAVKMYQNCLRKFYYNTDTQVILYLARTHYEAEQWQECKKTLLRAIHLAPSNYTL 2334
QG+FALAVKMYQNCLRKFYYNTD+QV+LYLARTHYEAEQWQ+CKKTLLRAIHLAPSNYTL
Sbjct: 727 QGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTL 786
Query: 2335 RFDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQLSAACSSHAHGFDEKKIE 2514
RFDAGVAMQKFSASTLQKTKRTADEVRSTV ELKNAVR+FSQLSAA + H HGFDEKKIE
Sbjct: 787 RFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGFDEKKIE 846
Query: 2515 THVGYCKHLLDAAKVHCEAAERDEQQNRQKLELARQVSLXXXXXXXXXXXXXFQIERRRQ 2694
THVGYCKHLL+AAKVHCEAAER+E QNR ++ELARQV+L FQ+ERR+Q
Sbjct: 847 THVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQLERRKQ 906
Query: 2695 EADLKQAIQQEENFERVKELWKSSSNTSGNKRRDRDRTLGDDSEGG 2832
E +LK+ +QQE++FERVKE WK SN +KR++R + DD EGG
Sbjct: 907 EDELKRVMQQEQHFERVKEQWK--SNNLNSKRKERSQI--DDDEGG 948
Score = 64.3 bits (155), Expect = 2e-07
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +1
Query: 3001 QDQLMAAGLEDSDAEDDMAAPS--NRKRRAWSSDEDNDDEPSGRHHDLSPAGRKEDSAGS 3174
QD L AAGLEDSDAEDDMA PS NR++RAWS E ++DEP + + SP +E+SA
Sbjct: 1012 QDLLAAAGLEDSDAEDDMAGPSSGNRRKRAWS--ESDEDEPQDQRPESSPV--RENSAEV 1067
Query: 3175 DPDDARDTETRDEMHEPN 3228
D E +D+ +PN
Sbjct: 1068 QESDG---EIKDDNDKPN 1082
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 1427 bits (3694), Expect = 0.0
Identities = 726/1048 (69%), Positives = 839/1048 (80%), Gaps = 9/1048 (0%)
Frame = +1
Query: 1 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD 180
ALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++Q+RQILEEGSSPEIDEYYAD
Sbjct: 18 ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYRQILEEGSSPEIDEYYAD 77
Query: 181 VKYERIAILNALGAYHTYLGKIETNRREKEEHFAAATDYYNRAARIDPYESSTWIGKGQL 360
V+YERIAILNALGAY++YLGKIET +REKEEHF AT YYN+A+RID +E STW+GKGQL
Sbjct: 78 VRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
Query: 361 CVARGELSKASDNFKIVLDTDPNSVPALVAKACIEFNNGENEDQYKKASESYKSSLELFK 540
+A+GE+ +AS FKIVLD D ++VPAL+ +AC+EFN G D SLEL+K
Sbjct: 138 LLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD-----------SLELYK 186
Query: 541 KALQIHPGCPAAVRLGIGLCRYRLGQFEKARQAFQRVLQLDPENVEALVALGIMDLQSSE 720
+ LQ++P CPAAVRLGIGLCRY+LGQFEKA+QAF+RVLQLDPENVE+L+AL IMDL+++E
Sbjct: 187 RVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIMDLRTNE 246
Query: 721 VHGIWKGTEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSNHKLMKAH 900
GI G KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV+NH K+H
Sbjct: 247 ATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
Query: 901 SYYNLARSYHSKGDFDKAARYYMASVKEINRPQDFVLPYYGLGQVQLKLGDLRSALSSFE 1080
SYYNLARSYHSKGD+DKA YYMASVKE+N+P +FV PYYGLGQVQ+KLGD +SALS+FE
Sbjct: 307 SYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKSALSNFE 366
Query: 1081 KVLEIHPENCDSLKAVGHIYVQLGQNDKALETFRKAARIDPKDAQAFMELGELLTSSDAV 1260
KVLE++P+NC++LKA+GHIYVQLGQ DK + RKA +IDP+DAQAF+ELGELL SD
Sbjct: 367 KVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLILSDTG 426
Query: 1261 AALDALKTARTLIKKGGEEVPVELLNNIGVLYFERGEFEFAEQTFKEALGEGIWLSLLDG 1440
AALDA KTA TL KKGG+EVP+ELLNNIGVL FERGEFE A QTFKEALG+G+WLS ++
Sbjct: 427 AALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVWLSFINE 486
Query: 1441 QN-SVMDPSAYSVQYKDFTLFHQLEENGTALDLPWDKVTTMFNYARLFEQLHDSEKASIL 1617
+N S +D + ++Q+KD LFH LE NG +++PWDKVT +FN ARL EQL+DS ASI
Sbjct: 487 ENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIF 546
Query: 1618 YRLILFKYPEYIDAYLRLAAMAKARNNIQLSIELIGEALKIDDKCPNALSMLGNLELKSD 1797
YRLILFKYP+YIDAYLRLAA+AKARNNI LSIEL+ +ALK+++KCPNALSMLG LELK+D
Sbjct: 547 YRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELKND 606
Query: 1798 DWVKAKDTFRAAKDATDGKDSYATLCLGNWNYYAAMRSEKRGPKLEATHLEKAKELYTKV 1977
DWVKAK+T R A DATDGKDSYATL LGNWNY+AA+R+EKR PKLEATHLEKAKEL T+V
Sbjct: 607 DWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELCTRV 666
Query: 1978 LMLRHGNLYAANGAGIVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYFAQ 2157
L+ NLYAANGA +VLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINLAHVYFAQ
Sbjct: 667 LIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 726
Query: 2158 GHFALAVKMYQNCLRKFYYNTDTQVILYLARTHYEAEQWQECKKTLLRAIHLAPSNYTLR 2337
G+F LAVKMYQNCLRKFY+NTD+Q++LYLARTHYEAEQWQ+C KTLLRAIHLAPSNYTLR
Sbjct: 727 GNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLR 786
Query: 2338 FDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQLSAACSSHAHGFDEKKIET 2517
FDAGVAMQKFSASTLQK KRTADEVR+TV EL+NAVRVFSQLSAA + H HGFDEKKI+T
Sbjct: 787 FDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDT 846
Query: 2518 HVGYCKHLLDAAKVHCEAAERDEQQNRQKLELARQVSLXXXXXXXXXXXXXFQIERRRQE 2697
HVGYC HLL AAKVH EAAE +EQQ RQ+ ELARQV+L FQ+ERR+QE
Sbjct: 847 HVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQMERRKQE 906
Query: 2698 ADLKQAIQQEENFERVKELWKSSSNTSGNKRRDRDRTLGDDSEGGHXXXXXXXXXXXXXX 2877
+LK+ +QEE+F RVKE WKSSS+ +KRR+R DD EGG
Sbjct: 907 DELKRVQKQEEHFRRVKEQWKSSSH---SKRRER----SDDEEGGTGEKKRKKGGKRRKK 959
Query: 2878 XXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRTQDQ-------LMAAGLEDS 3036
Y D L AAGLEDS
Sbjct: 960 DKHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGLEDS 1019
Query: 3037 DAEDDMAAPSNR-KRRAWSSDEDNDDEP 3117
DA+++ AAPS+ RR + E +DDEP
Sbjct: 1020 DADEETAAPSSSIARRRQALSESDDDEP 1047
>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1086
Score = 1412 bits (3654), Expect = 0.0
Identities = 704/945 (74%), Positives = 811/945 (85%), Gaps = 1/945 (0%)
Frame = +1
Query: 1 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD 180
ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGK++QFRQILEEGSSPEID+YYAD
Sbjct: 18 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFRQILEEGSSPEIDDYYAD 77
Query: 181 VKYERIAILNALGAYHTYLGKIETNRREKEEHFAAATDYYNRAARIDPYESSTWIGKGQL 360
V+YERIAILNALGAY++YLGKIET +REKEEHF AT YYN+A+RID +E STW+GKGQL
Sbjct: 78 VRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
Query: 361 CVARGELSKASDNFKIVLDTDPNSVPALVAKACIEFNNGENEDQYKKASESYKSSLELFK 540
+A+GE+ +AS FKIVLD D ++VPAL+ +AC+EFN G Y SLEL+K
Sbjct: 138 LLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGR-----------YSDSLELYK 186
Query: 541 KALQIHPGCPAAVRLGIGLCRYRLGQFEKARQAFQRVLQLDPENVEALVALGIMDLQSSE 720
+AL ++P CPAAVRLGIGLCRY+LGQFEKA+QAF+R LDPENVEALVAL IMDL+++E
Sbjct: 187 RALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIMDLRTNE 243
Query: 721 VHGIWKGTEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSNHKLMKAH 900
GI G KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV+NH K+H
Sbjct: 244 ATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 303
Query: 901 SYYNLARSYHSKGDFDKAARYYMASVKEINRPQDFVLPYYGLGQVQLKLGDLRSALSSFE 1080
SYYNLARSYHSKGD+DKA YYMASVKE+N+P +FV PYYGLGQVQ+KLGD +SALS+FE
Sbjct: 304 SYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKSALSNFE 363
Query: 1081 KVLEIHPENCDSLKAVGHIYVQLGQNDKALETFRKAARIDPKDAQAFMELGELLTSSDAV 1260
KVLE++P+NC++LKA+GHIYVQLGQ DK + RKA +IDP+DAQAF+ELGELL SD
Sbjct: 364 KVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLILSDTG 423
Query: 1261 AALDALKTARTLIKKGGEEVPVELLNNIGVLYFERGEFEFAEQTFKEALGEGIWLSLLDG 1440
AALDA KTARTL KKGG+EVP+ELLNNIGVL FERGEFE A+QTFKEALG+G+WLS ++
Sbjct: 424 AALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVWLSFINE 483
Query: 1441 QN-SVMDPSAYSVQYKDFTLFHQLEENGTALDLPWDKVTTMFNYARLFEQLHDSEKASIL 1617
+ S +D + ++Q+KD LFH LE NG +++PWDKVT +FN ARL EQL+DS ASIL
Sbjct: 484 EKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDSGTASIL 543
Query: 1618 YRLILFKYPEYIDAYLRLAAMAKARNNIQLSIELIGEALKIDDKCPNALSMLGNLELKSD 1797
YRL+LFKYP+YIDAYLRLAA+AKARNNI LSIEL+ +ALK+++KCPNALSMLG LELK+D
Sbjct: 544 YRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELKND 603
Query: 1798 DWVKAKDTFRAAKDATDGKDSYATLCLGNWNYYAAMRSEKRGPKLEATHLEKAKELYTKV 1977
DWVKAK+T RAA DAT+GKDSYA+L LGNWNY+AA+R+EKR PKLEATHLEKAKELYT+V
Sbjct: 604 DWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRV 663
Query: 1978 LMLRHGNLYAANGAGIVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYFAQ 2157
L+ NLYAANGA +VLAEKG FDVSKDIFTQVQEAASGS+FVQMPDVWINLAHVYFAQ
Sbjct: 664 LIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 723
Query: 2158 GHFALAVKMYQNCLRKFYYNTDTQVILYLARTHYEAEQWQECKKTLLRAIHLAPSNYTLR 2337
G+F LAVKMYQNCLRKFY+NTD+Q++LYLARTHYEAEQWQ+C KTLLRAIHLAPSNYTLR
Sbjct: 724 GNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLR 783
Query: 2338 FDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQLSAACSSHAHGFDEKKIET 2517
FDAGVAMQKFSASTLQK KRTADEVR+TV EL+NAVRVFSQLSAA + H HGFDEKKI+T
Sbjct: 784 FDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDT 843
Query: 2518 HVGYCKHLLDAAKVHCEAAERDEQQNRQKLELARQVSLXXXXXXXXXXXXXFQIERRRQE 2697
HVGYC HLL AAKVH EAAER+EQQ RQ+ ELARQV+ FQ+ERR+QE
Sbjct: 844 HVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQMERRKQE 903
Query: 2698 ADLKQAIQQEENFERVKELWKSSSNTSGNKRRDRDRTLGDDSEGG 2832
+LK+ QQEE+F RVKE WKSSS+ +KRR+R DD EGG
Sbjct: 904 DELKRVQQQEEHFRRVKEQWKSSSH---SKRRER----SDDEEGG 941
>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
sativus]
Length = 1074
Score = 1396 bits (3613), Expect = 0.0
Identities = 715/1076 (66%), Positives = 847/1076 (78%), Gaps = 14/1076 (1%)
Frame = +1
Query: 1 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD 180
ALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK+EQFRQILEEGSSPEIDEYYAD
Sbjct: 18 ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFRQILEEGSSPEIDEYYAD 77
Query: 181 VKYERIAILNALGAYHTYLGKIETNRREKEEHFAAATDYYNRAARIDPYESSTWIGKGQL 360
V+YERIAILNALGAY++YLGKIET +REKEEHF AT YYN+A+RID +E STW+GKGQL
Sbjct: 78 VRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
Query: 361 CVARGELSKASDNFKIVLDTDPNSVPALVAKACIEFNNGENEDQYKKASESYKSSLELFK 540
+ +GE+ +A FKIVLD D ++VPAL+ +AC+EFN G Y SLEL+K
Sbjct: 138 LLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGH-----------YSESLELYK 186
Query: 541 KALQIHPGCPAAVRLGIGLCRYRLGQFEKARQAFQRVLQLDPENVEALVALGIMDLQSSE 720
+ALQ++P CPAAVRLGIGLCRY+L Q+ KA+QAF+R LDPENVEALV L I+DL ++E
Sbjct: 187 RALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAIIDLNTNE 243
Query: 721 VHGIWKGTEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSNHKLMKAH 900
I G EKMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA++NH K+H
Sbjct: 244 AGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNHGPTKSH 303
Query: 901 SYYNLARSYHSKGDFDKAARYYMASVKEINRPQDFVLPYYGLGQVQLKLGDLRSALSSFE 1080
S+YNLARSYHSKGD++KA YYMAS KE N+P++FV PYYGLGQVQLK+GDLRSALS+FE
Sbjct: 304 SFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRSALSNFE 363
Query: 1081 KVLEIHPENCDSLKAVGHIYVQLGQNDKALETFRKAARIDPKDAQAFMELGELLTSSDAV 1260
KVLE++P+NC++LK +GHIYVQLGQ +KA E+ RKA +IDP+DAQAF++LGELL S+D
Sbjct: 364 KVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELLISTDES 423
Query: 1261 AALDALKTARTLIKKGGEEVPVELLNNIGVLYFERGEFEFAEQTFKEALGEGIWLSLLDG 1440
AALDA KTA L+KKGG+EVP+E+LNN+GVL+FER EFE AE+ FKEALG+GIWL +DG
Sbjct: 424 AALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIWLDFIDG 483
Query: 1441 QNS--VMDPSAYSVQYKDFTLFHQLEENGTALDLPWDKVTTMFNYARLFEQLHDSEKASI 1614
+ ++ SA +QYKD LF+QLE G A+ LPW KVT++FN ARL EQLH E +S+
Sbjct: 484 KVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSV 543
Query: 1615 LYRLILFKYPEYIDAYLRLAAMAKARNNIQLSIELIGEALKIDDKCPNALSMLGNLELKS 1794
LYRLILFKYP+Y+DAYLRLA++AKARN +QLSIEL+ +ALK++DKC NALSMLG LELK+
Sbjct: 544 LYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLGELELKN 603
Query: 1795 DDWVKAKDTFRAAKDATDGKDSYATLCLGNWNYYAAMRSEKRGPKLEATHLEKAKELYTK 1974
DDWV+AK+TFRAA +ATDGKDSYATL LGNWNY+AA+R+EKR PKLEATHLEK+KELYT+
Sbjct: 604 DDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTR 663
Query: 1975 VLMLRHGNLYAANGAGIVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYFA 2154
VL+ NLYAANGAG++LAEKGQFDVSKDIFTQVQEAASG+IFVQMPDVWINLAHVYFA
Sbjct: 664 VLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFA 723
Query: 2155 QGHFALAVKMYQNCLRKFYYNTDTQVILYLARTHYEAEQWQECKKTLLRAIHLAPSNYTL 2334
QG+F+LAVKMYQNCLRKFYYNTD Q++LYLART+YEAEQWQ+CKKTLLRAIHLAPSNYTL
Sbjct: 724 QGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTL 783
Query: 2335 RFDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQLSAACSSHAHGFDEKKIE 2514
RFDAGVAMQKFSASTLQKTKRTADEVRSTV EL+NAVRVFSQLSAA + H HGFDEKKI+
Sbjct: 784 RFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKID 843
Query: 2515 THVGYCKHLLDAAKVHCEAAERDEQQNRQKLELARQVSLXXXXXXXXXXXXXFQIERRRQ 2694
THVGYCKHLL+AA VH +AAE +EQQ RQ+ ELARQV+L FQ+ERR+
Sbjct: 844 THVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKL 903
Query: 2695 EADLKQAIQQEENFERVKELWKSSSNTSGNKRRDRDRTLGDDSEGGHXXXXXXXXXXXXX 2874
E + K+ +QQE++F+RVKE WKS + KRR+R DD E G+
Sbjct: 904 EDEEKRMMQQEQHFKRVKEQWKSITPA---KRRERSEI--DDDEAGNSEKRRRKGGKRRK 958
Query: 2875 XXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------RTQDQLMAAGL 3027
Y V QD L AGL
Sbjct: 959 KDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAGL 1018
Query: 3028 EDSDAEDDMAAPSN---RKRRAWSSDEDNDDEPSGRHHDLSPAGRKEDSAGSDPDD 3186
EDSDAED+ APS+ R+R WS E+++ + R L ++E+SAG + D
Sbjct: 1019 EDSDAEDEAGAPSSNAARRRATWSDSEEDEPIDTQRESRL----QRENSAGLEDSD 1070
>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
gi|222833309|gb|EEE71786.1| PAF1 complex component
[Populus trichocarpa]
Length = 1056
Score = 1392 bits (3603), Expect = 0.0
Identities = 714/1051 (67%), Positives = 842/1051 (80%), Gaps = 13/1051 (1%)
Frame = +1
Query: 1 ALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD 180
ALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++QFRQILEEGSS EIDEYYAD
Sbjct: 18 ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFRQILEEGSSHEIDEYYAD 77
Query: 181 VKYERIAILNALGAYHTYLGKIETNRREKEEHFAAATDYYNRAARIDPYESSTWIGKGQL 360
V+YERIAILNALGAY++YLGK+ET +REKEE+F AT +YN+A+RID +E STW+GKGQL
Sbjct: 78 VRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKASRIDMHEPSTWVGKGQL 137
Query: 361 CVARGELSKASDNFKIVLDTDPNSVPALVAKACIEFNNGENEDQYKKASESYKSSLELFK 540
+A+GE+ +AS F+IVL+ D ++V AL+ +AC+E++ G Y SL LFK
Sbjct: 138 LLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGH-----------YGESLTLFK 186
Query: 541 KALQIHPGCPAAVRLGIGLCRYRLGQFEKARQAFQRVLQLDPENVEALVALGIMDLQSSE 720
+ALQ++P CP AVRLGIG C Y+LG KA AFQR LDPENVEALV+L I+DLQ++E
Sbjct: 187 RALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAILDLQTNE 243
Query: 721 VHGIWKGTEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVSNHKLMKAH 900
I KG EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV+NH K+H
Sbjct: 244 AAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 303
Query: 901 SYYNLARSYHSKGDFDKAARYYMASVKEINRPQDFVLPYYGLGQVQLKLGDLRSALSSFE 1080
SYYNLARSYHSKGD++ A+RYY ASVKEIN+P +FV PYYGLGQVQLKLG++++ALS+FE
Sbjct: 304 SYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKNALSNFE 363
Query: 1081 KVLEIHPENCDSLKAVGHIYVQLGQNDKALETFRKAARIDPKDAQAFMELGELLTSSDAV 1260
KVLE++P+NC++LK +GHIYVQLGQ +KA E RKAA+IDP+DAQAF++LGELL S+D
Sbjct: 364 KVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELLISTDTG 423
Query: 1261 AALDALKTARTLIKKGGEEVPVELLNNIGVLYFERGEFEFAEQTFKEALGEGIWLSLLDG 1440
AALDA KTAR+L+KKGGEEVP+E+LNNI V++FER E E A Q FKEALG+GIWL+ L+G
Sbjct: 424 AALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIWLTFLEG 483
Query: 1441 QNSVMDPSAYS--VQYKDFTLFHQLEENGTALDLPWDKVTTMFNYARLFEQLHDSEKASI 1614
+ + + A S +QYKD +F +LEE G +++L W+KVTT+FN ARL EQLH++E AS
Sbjct: 484 KANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHNTETAST 543
Query: 1615 LYRLILFKYPEYIDAYLRLAAMAKARNNIQLSIELIGEALKIDDKCPNALSMLGNLELKS 1794
LYRLILFKYP+Y+DAYLRLAA+AKARNN+ LSIEL+ EAL ++DKCPNALSMLG+LELK+
Sbjct: 544 LYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLGDLELKN 603
Query: 1795 DDWVKAKDTFRAAKDATDGKDSYATLCLGNWNYYAAMRSEKRGPKLEATHLEKAKELYTK 1974
DDWVKAK+TFRAA +ATDGKDSYATL LGNWNY+AA+R+EKR PKLEATHLEKAKELYT+
Sbjct: 604 DDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTR 663
Query: 1975 VLMLRHGNLYAANGAGIVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYFA 2154
VL+ NLYAANGAG+VLAEKG FDVSKD+FTQVQEAASGSIFVQMPDVWINLAHVYFA
Sbjct: 664 VLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFA 723
Query: 2155 QGHFALAVKMYQNCLRKFYYNTDTQVILYLARTHYEAEQWQECKKTLLRAIHLAPSNYTL 2334
QG+FALAVKMYQNCL+KF+YNTD+Q++LYLARTHYEAEQWQ+CK+TLLRAIHL PSNYTL
Sbjct: 724 QGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTL 783
Query: 2335 RFDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQLSAACSSHAHGFDEKKIE 2514
RFDAGVAMQKFSASTLQKTKRT DEVRSTV EL+NAVR+FSQLSAA + + +GFDEKKI
Sbjct: 784 RFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGFDEKKIN 843
Query: 2515 THVGYCKHLLDAAKVHCEAAERDEQQNRQKLELARQVSLXXXXXXXXXXXXXFQIERRRQ 2694
THV YCKHLL+AA VH EAAER+EQQNRQ+L+LARQ++L FQ+ERR+Q
Sbjct: 844 THVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQLERRKQ 903
Query: 2695 EADLKQAIQQEENFERVKELWKSSSNTSGNKRRDRDRTLGDDSEGGHXXXXXXXXXXXXX 2874
E +LK+ QQEE+FERVKE WKSS TS +KRRDR DD EGGH
Sbjct: 904 EDELKRVRQQEEHFERVKEQWKSS--TSASKRRDRADI--DDGEGGHGEKRRRKGGKRRK 959
Query: 2875 XXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRTQDQ--------LMAAGLE 3030
Y D L AAGLE
Sbjct: 960 KEKSSRSRYEMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEENAQDVLAAAGLE 1019
Query: 3031 DSDAEDDMAAPSN--RKRRAWS-SDEDNDDE 3114
DSDA+DD AAPS+ R++RAWS SDED E
Sbjct: 1020 DSDADDDAAAPSSAGRRKRAWSESDEDEISE 1050