BLASTX nr result

ID: Dioscorea21_contig00010649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010649
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799...   127   1e-27
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      125   3e-27
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   124   6e-27

>ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799961 [Glycine max]
          Length = 572

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/105 (62%), Positives = 79/105 (75%), Gaps = 5/105 (4%)
 Frame = +1

Query: 1   AIYRHRNPVSSENQSYGKGQDHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQRLQVMI 180
           +IYR RNPV+ EN   G+G   +IDLHGLHV++A+HVLKHEL  LR+  R+  QRLQV I
Sbjct: 471 SIYRQRNPVAPEN---GRGPQRMIDLHGLHVSEAIHVLKHELSVLRSTARAPEQRLQVYI 527

Query: 181 CV-----TRGSRMPARLPGAVEHYLLEENLHYSQPQPGLLHVVIY 300
           CV     TRGSR PARLP AV+ YLLEE L +++PQPGLL VVIY
Sbjct: 528 CVGTGHHTRGSRTPARLPIAVQRYLLEEGLDFTEPQPGLLCVVIY 572


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/106 (61%), Positives = 78/106 (73%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   AIYRHRNPVSSENQSYGKGQDHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQRLQVMI 180
           +IYR RNP S E Q  G+G + +IDLHGLHV +A+HVLKHEL  LR+  R+  QRLQV I
Sbjct: 478 SIYRQRNPASLEMQGTGRGHERMIDLHGLHVTEAIHVLKHELSILRSTARAADQRLQVYI 537

Query: 181 CV-----TRGSRMPARLPGAVEHYLL-EENLHYSQPQPGLLHVVIY 300
           CV     TRG+R PARLP AV+ YLL EE L Y++PQPGLL VV+Y
Sbjct: 538 CVGTGHHTRGARTPARLPVAVQRYLLEEEGLDYTEPQPGLLRVVMY 583


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   AIYRHRNPVSSENQSYGKGQDHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQRLQVMI 180
           +IY  RNPVS E Q  G+G + +IDLHGLHV +A+HVLKHEL  LR+  ++  QRLQV I
Sbjct: 476 SIYHQRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQRLQVYI 535

Query: 181 CV-----TRGSRMPARLPGAVEHYLL-EENLHYSQPQPGLLHVVIY 300
           CV     TRGSR PARLP AV+ YLL EE L Y++P PGLL VVIY
Sbjct: 536 CVGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPHPGLLRVVIY 581


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   AIYRHRNPVSSENQSYGKGQDHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQRLQVMI 180
           +IY  RNPVS E Q  G+G + +IDLHGLHV +A+HVLKHEL  LR+  ++  QRLQV I
Sbjct: 476 SIYHQRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQRLQVYI 535

Query: 181 CV-----TRGSRMPARLPGAVEHYLL-EENLHYSQPQPGLLHVVIY 300
           CV     TRGSR PARLP AV+ YLL EE L Y++P PGLL VVIY
Sbjct: 536 CVGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPHPGLLRVVIY 581


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/101 (63%), Positives = 77/101 (76%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   AIYRHRNPVSSENQSYGKGQDHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQRLQVMI 180
           +IYR RNP+SSE Q  G+G + +IDLHGLHV++A+HVLKHEL  LR+  R+  QRLQV I
Sbjct: 479 SIYRLRNPISSEMQGNGRGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYI 538

Query: 181 CV-----TRGSRMPARLPGAVEHYLL-EENLHYSQPQPGLL 285
           CV     TRGSR PARLP AV+ YLL EE L Y++PQPGLL
Sbjct: 539 CVGTGHHTRGSRTPARLPIAVQQYLLEEEGLDYTEPQPGLL 579


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