BLASTX nr result

ID: Dioscorea21_contig00010618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010618
         (2175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16624.3| unnamed protein product [Vitis vinifera]              313   1e-82
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...   313   1e-82
ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...   306   1e-80
ref|XP_002511630.1| structural constituent of nuclear pore, puta...   306   2e-80
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...   303   1e-79

>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  313 bits (802), Expect = 1e-82
 Identities = 160/258 (62%), Positives = 196/258 (75%)
 Frame = -3

Query: 1372 STSAPAFGVTPAASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVASQGPKLPSEIAG 1193
            +T++P FGV P+ +V                               VA   PK+PSEI G
Sbjct: 551  TTASPLFGVPPSTAVAVTSSSTTAVQTSSSLVVASSSGTNSTVTTAVAP-APKMPSEITG 609

Query: 1192 KTVEEIIKDWNAELQDRAAKFRKQATAIAEWDRRILQNRDILIRLEAEVAKVVESQTILE 1013
            KTVEEIIK+WN ELQ+R  KFRKQATAIAEWD++ILQNRD+L+RLE EVAKVVE+Q  LE
Sbjct: 610  KTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLEIEVAKVVETQAQLE 669

Query: 1012 RQLELIETHQKEVDRALKSMEDEAERIYKEERGLLLADEAVAVRDKMYEQAEYIEQEMEK 833
            RQLELIETHQ+EVD+AL S+E+EAERIYK+ERGLLL DEA + RD MYEQAE+IE+EME+
Sbjct: 670  RQLELIETHQQEVDKALLSIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIEREMEQ 729

Query: 832  MVEQIKSIIQTLNANQGGDLALVESMTPIDVAVRILNNQLSSLMWLDEKANEFSNRIQEL 653
            M EQIKSIIQTLN NQGG+L +++ MTP+DV VRILNNQLSSLMW+DEKA EF++RIQ+L
Sbjct: 730  MTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIVRILNNQLSSLMWIDEKAQEFNSRIQKL 789

Query: 652  ANRGTPLSQNTQGTKFWL 599
            A++G+     + G KFW+
Sbjct: 790  ASQGSTSEHGSMGPKFWM 807


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score =  313 bits (802), Expect = 1e-82
 Identities = 160/258 (62%), Positives = 196/258 (75%)
 Frame = -3

Query: 1372 STSAPAFGVTPAASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVASQGPKLPSEIAG 1193
            +T++P FGV P+ +V                               VA   PK+PSEI G
Sbjct: 518  TTASPLFGVPPSTAVAVTSSSTTAVQTSSSLVVASSSGTNSTVTTAVAP-APKMPSEITG 576

Query: 1192 KTVEEIIKDWNAELQDRAAKFRKQATAIAEWDRRILQNRDILIRLEAEVAKVVESQTILE 1013
            KTVEEIIK+WN ELQ+R  KFRKQATAIAEWD++ILQNRD+L+RLE EVAKVVE+Q  LE
Sbjct: 577  KTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLEIEVAKVVETQAQLE 636

Query: 1012 RQLELIETHQKEVDRALKSMEDEAERIYKEERGLLLADEAVAVRDKMYEQAEYIEQEMEK 833
            RQLELIETHQ+EVD+AL S+E+EAERIYK+ERGLLL DEA + RD MYEQAE+IE+EME+
Sbjct: 637  RQLELIETHQQEVDKALLSIEEEAERIYKDERGLLLDDEAASTRDAMYEQAEFIEREMEQ 696

Query: 832  MVEQIKSIIQTLNANQGGDLALVESMTPIDVAVRILNNQLSSLMWLDEKANEFSNRIQEL 653
            M EQIKSIIQTLN NQGG+L +++ MTP+DV VRILNNQLSSLMW+DEKA EF++RIQ+L
Sbjct: 697  MTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIVRILNNQLSSLMWIDEKAQEFNSRIQKL 756

Query: 652  ANRGTPLSQNTQGTKFWL 599
            A++G+     + G KFW+
Sbjct: 757  ASQGSTSEHGSMGPKFWM 774


>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
            predicted protein [Populus trichocarpa]
          Length = 241

 Score =  306 bits (784), Expect = 1e-80
 Identities = 150/205 (73%), Positives = 181/205 (88%)
 Frame = -3

Query: 1219 PKLPSEIAGKTVEEIIKDWNAELQDRAAKFRKQATAIAEWDRRILQNRDILIRLEAEVAK 1040
            PKLPSEI GKTVEEIIK+WN+ELQ+R  KFRKQATAIAEWD+RILQNRD+L+RLE EVAK
Sbjct: 37   PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAIAEWDKRILQNRDVLLRLEIEVAK 96

Query: 1039 VVESQTILERQLELIETHQKEVDRALKSMEDEAERIYKEERGLLLADEAVAVRDKMYEQA 860
            VVE+Q  LER+LELIETHQ+EVD+AL+S+E+EAERIYK+ERG LL DEA + RD MYEQA
Sbjct: 97   VVETQANLERKLELIETHQQEVDKALQSIEEEAERIYKDERGSLLDDEAASTRDAMYEQA 156

Query: 859  EYIEQEMEKMVEQIKSIIQTLNANQGGDLALVESMTPIDVAVRILNNQLSSLMWLDEKAN 680
            E+IE+EME+M EQIKS+IQT+NANQGG+L  ++ MTP+D+ VRILNNQLSSLMW+DEKA 
Sbjct: 157  EFIEREMEQMTEQIKSVIQTVNANQGGELDAIDGMTPLDMVVRILNNQLSSLMWIDEKAE 216

Query: 679  EFSNRIQELANRGTPLSQNTQGTKF 605
            EFS+RIQ+LAN+G+   +   G KF
Sbjct: 217  EFSSRIQKLANQGSAADRQFLGLKF 241


>ref|XP_002511630.1| structural constituent of nuclear pore, putative [Ricinus communis]
            gi|223548810|gb|EEF50299.1| structural constituent of
            nuclear pore, putative [Ricinus communis]
          Length = 811

 Score =  306 bits (783), Expect = 2e-80
 Identities = 149/210 (70%), Positives = 180/210 (85%)
 Frame = -3

Query: 1228 SQGPKLPSEIAGKTVEEIIKDWNAELQDRAAKFRKQATAIAEWDRRILQNRDILIRLEAE 1049
            S  PKLPSEI GKTVEEIIK+WNAELQ+R  KFRKQA AIAEWD+RIL NRD+L+RLE E
Sbjct: 601  SATPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQAAAIAEWDKRILHNRDVLLRLEIE 660

Query: 1048 VAKVVESQTILERQLELIETHQKEVDRALKSMEDEAERIYKEERGLLLADEAVAVRDKMY 869
            VAKVVE+Q  LERQLELIETHQ+EVD+A++SME+EAERIYK+ERGLLL DEA + RD MY
Sbjct: 661  VAKVVETQANLERQLELIETHQQEVDKAVQSMEEEAERIYKDERGLLLDDEAASTRDAMY 720

Query: 868  EQAEYIEQEMEKMVEQIKSIIQTLNANQGGDLALVESMTPIDVAVRILNNQLSSLMWLDE 689
            EQAE +E+E+E+M +QIKS+I TLNA+QGG+L  ++ MTP+DV VRILNNQLSSLMW+DE
Sbjct: 721  EQAELVERELEQMTQQIKSVIDTLNASQGGELDTIDRMTPLDVVVRILNNQLSSLMWIDE 780

Query: 688  KANEFSNRIQELANRGTPLSQNTQGTKFWL 599
            KA EFS+RIQ+LA +G+   +   G KFW+
Sbjct: 781  KAEEFSSRIQKLATQGSAADRELMGPKFWM 810


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score =  303 bits (776), Expect = 1e-79
 Identities = 152/211 (72%), Positives = 179/211 (84%), Gaps = 1/211 (0%)
 Frame = -3

Query: 1228 SQGPKLPSEIAGKTVEEIIKDWNAELQDRAAKFRKQATAIAEWDRRILQNRDILIRLEAE 1049
            S  PKLPSEI GKTVEEIIK+WNAELQ+R  KFRKQA AIAEWDRRI+QNRDIL+RLE E
Sbjct: 546  SSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLEIE 605

Query: 1048 VAKVVESQTILERQLELIETHQKEVDRALKSMEDEAERIYKEERGLLLADEAVAVRDKMY 869
            VAKVVE+Q  LE++LELIETHQ+EVD+AL S+E++AERIYK+ERGLLL DEA + RD MY
Sbjct: 606  VAKVVETQAELEKKLELIETHQQEVDKALVSVEEDAERIYKDERGLLLDDEAASTRDAMY 665

Query: 868  EQAEYIEQEMEKMVEQIKSIIQTLNANQGGDLALVESMTPIDVAVRILNNQLSSLMWLDE 689
            EQAEYIE+E+E+M EQIKSIIQTLNANQGG+L +++ MTP+D  VRILNNQLSSLMW+DE
Sbjct: 666  EQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDE 725

Query: 688  KANEFSNRIQEL-ANRGTPLSQNTQGTKFWL 599
            KA EFS+RIQ+L A  G    +   G K W+
Sbjct: 726  KAEEFSSRIQKLAATEGPAADRELLGQKLWM 756


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