BLASTX nr result

ID: Dioscorea21_contig00010608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010608
         (1915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   443   e-133
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   448   e-133
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   447   e-131
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   440   e-131
ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240...   432   e-128

>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  443 bits (1140), Expect(2) = e-133
 Identities = 223/350 (63%), Positives = 260/350 (74%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1915 SLGSGDRKRCSLVCRRWFAVEGQXXXXXXXXXXXXXXXXXXXXXXRFDAVSKLALKCDRR 1736
            SL   DR+RCSLVCRRW  +EGQ                      RFDAV+KLAL+CDR+
Sbjct: 67   SLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDAVTKLALRCDRK 126

Query: 1735 SDSIGDEALALISLRCPNLTRLKIRACRXXXXXXXXXXXAHCPSLRKLSCGSCAFGSKGI 1556
            S SIGDEAL  ISLRC NLTRLK+R+CR            +C  L+KLSCGSC FG+KG+
Sbjct: 127  SASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLSCGSCTFGAKGM 186

Query: 1555 DAVLKGCPLLEELSIKRLRXXXXXXXXXXXXXXXG--SLRSICLKELYNGQCFGPLIAGC 1382
            +AVL  C  LEELSIKRLR                  SL++ICLKELYNGQCFGPLI G 
Sbjct: 187  NAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYNGQCFGPLIIGS 246

Query: 1381 RNLKTLKLFRCSGDWDLLLDDIATKVPGIVEIHLEKLQVSDRGLFSISACADLEVLHLVK 1202
            +NL+TLKLFRCSGDWD LL  I+ +V G+VEIHLE+LQVSD GL +IS C DLE+LHLVK
Sbjct: 247  KNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISNCLDLEILHLVK 306

Query: 1201 TPECTDAGLAWVAEKCRLLRKIHIDGWKTNRIGDEGLMAVAQRCPNLQELVLIGVNPTAR 1022
            TPECT+ GL  +AE+C+LLRK+HIDGWK NRIGD+GL+AVA+ CPNLQELVLIGVNPT  
Sbjct: 307  TPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPNLQELVLIGVNPTKS 366

Query: 1021 SLGLIASNCRNLERLALCGSETFGDQEISCIASKCMALKKLCIKGCPVSD 872
            SL ++ASNC+NLERLALCGS+T GD EISCIA+KC++LKKLCIK CPVSD
Sbjct: 367  SLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSD 416



 Score = 61.2 bits (147), Expect(2) = e-133
 Identities = 31/44 (70%), Positives = 32/44 (72%)
 Frame = -3

Query: 800 GMEALAEGCPNLXXXXXXXXXXVTAEGADWLRASRGSLAVNLDA 669
           GMEALA GCPNL          VT EGADWLRASRGSLAVNLD+
Sbjct: 418 GMEALASGCPNLVKVKVKKCRGVTCEGADWLRASRGSLAVNLDS 461


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
            gi|222835491|gb|EEE73926.1| f-box family protein [Populus
            trichocarpa]
          Length = 534

 Score =  448 bits (1153), Expect(2) = e-133
 Identities = 225/350 (64%), Positives = 261/350 (74%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1915 SLGSGDRKRCSLVCRRWFAVEGQXXXXXXXXXXXXXXXXXXXXXXRFDAVSKLALKCDRR 1736
            SL SGDRK CSLVCRRW  +EGQ                      RFD+V+KLALKCDRR
Sbjct: 66   SLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLALKCDRR 125

Query: 1735 SDSIGDEALALISLRCPNLTRLKIRACRXXXXXXXXXXXAHCPSLRKLSCGSCAFGSKGI 1556
            S SIGDEAL  IS RC NLTRLK+R+CR            +C +L+KLSCGSC FG++G+
Sbjct: 126  STSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTFGARGM 185

Query: 1555 DAVLKGCPLLEELSIKRLRXXXXXXXXXXXXXXXG--SLRSICLKELYNGQCFGPLIAGC 1382
            +A+L  C  LEELS+KRLR                  SL++ICLKELYNGQCFGPLI G 
Sbjct: 186  NAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQCFGPLIIGS 245

Query: 1381 RNLKTLKLFRCSGDWDLLLDDIATKVPGIVEIHLEKLQVSDRGLFSISACADLEVLHLVK 1202
            +NLKTLKLFRCSGDWD LL  I+ +V G+VEIHLE+LQVSD GL +IS C +LE+LHLVK
Sbjct: 246  KNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLNLEILHLVK 305

Query: 1201 TPECTDAGLAWVAEKCRLLRKIHIDGWKTNRIGDEGLMAVAQRCPNLQELVLIGVNPTAR 1022
            TPECTD GL  +AE+CRLLRK+H+DGWKTNRIGD+GL AVA+ CPNLQELVLIGVNPT  
Sbjct: 306  TPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNLQELVLIGVNPTKI 365

Query: 1021 SLGLIASNCRNLERLALCGSETFGDQEISCIASKCMALKKLCIKGCPVSD 872
            S+ L+ASNC+NLERLALCGS+T GD EISCIA+KC+ALKKLCIK CPVSD
Sbjct: 366  SVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSD 415



 Score = 56.2 bits (134), Expect(2) = e-133
 Identities = 30/50 (60%), Positives = 30/50 (60%)
 Frame = -3

Query: 800 GMEALAEGCPNLXXXXXXXXXXVTAEGADWLRASRGSLAVNLDAVGPVEQ 651
           GMEALA GCPNL          VT E ADWLR  RGSLAVNLD   P  Q
Sbjct: 417 GMEALANGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCGEPEHQ 466


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
            gi|222842891|gb|EEE80438.1| f-box family protein [Populus
            trichocarpa]
          Length = 533

 Score =  447 bits (1151), Expect(2) = e-131
 Identities = 228/350 (65%), Positives = 261/350 (74%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1915 SLGSGDRKRCSLVCRRWFAVEGQXXXXXXXXXXXXXXXXXXXXXXRFDAVSKLALKCDRR 1736
            SL SGDRK CSLVCRRW  +EGQ                      RFDAV+KLALKCDRR
Sbjct: 65   SLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLALKCDRR 124

Query: 1735 SDSIGDEALALISLRCPNLTRLKIRACRXXXXXXXXXXXAHCPSLRKLSCGSCAFGSKGI 1556
            S SIGDEAL  IS+RC NLTRLK+RACR            +C +L+K SCGSCAFG+KG+
Sbjct: 125  SVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCAFGAKGM 184

Query: 1555 DAVLKGCPLLEELSIKRLRXXXXXXXXXXXXXXXG--SLRSICLKELYNGQCFGPLIAGC 1382
            +A+L  C  LE+LS+KRLR                  SL++ICLKELYNGQCFGPLI G 
Sbjct: 185  NAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFGPLIIGS 244

Query: 1381 RNLKTLKLFRCSGDWDLLLDDIATKVPGIVEIHLEKLQVSDRGLFSISACADLEVLHLVK 1202
            +NLKTLKLFRCSGDWD LL  IA +V G+VEIHLE+LQVSD GL +IS C +LE+LHLVK
Sbjct: 245  KNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLEILHLVK 304

Query: 1201 TPECTDAGLAWVAEKCRLLRKIHIDGWKTNRIGDEGLMAVAQRCPNLQELVLIGVNPTAR 1022
            TPECTD GL  +AE+CRLLRK+HIDGWK +RIGD+GLMAVA+ C NLQELVLIGVNPT  
Sbjct: 305  TPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNLQELVLIGVNPTQI 364

Query: 1021 SLGLIASNCRNLERLALCGSETFGDQEISCIASKCMALKKLCIKGCPVSD 872
            SL L+ASNC+NLERLALCGS+T GD EISCIA+KC+ALKKLCIK CPVSD
Sbjct: 365  SLELLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSD 414



 Score = 49.3 bits (116), Expect(2) = e-131
 Identities = 28/50 (56%), Positives = 30/50 (60%)
 Frame = -3

Query: 800 GMEALAEGCPNLXXXXXXXXXXVTAEGADWLRASRGSLAVNLDAVGPVEQ 651
           G+EALA GCPNL          VT E AD LR  RGSLAVNLD+  P  Q
Sbjct: 416 GLEALANGCPNLVKVKVKKCRAVTYECADLLRMKRGSLAVNLDSGEPEHQ 465


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
            gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
            At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  440 bits (1132), Expect(2) = e-131
 Identities = 224/349 (64%), Positives = 260/349 (74%), Gaps = 1/349 (0%)
 Frame = -1

Query: 1915 SLGSGDRKRCSLVCRRWFAVEGQXXXXXXXXXXXXXXXXXXXXXXRFDAVSKLALKCDRR 1736
            SL S DRK CSLVCRRWF VEGQ                      RFDAV+KLALKCDRR
Sbjct: 66   SLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKLALKCDRR 125

Query: 1735 SDSIGDEALALISLRCPNLTRLKIRACRXXXXXXXXXXXAHCPSLRKLSCGSCAFGSKGI 1556
            S SI D++L LISLRC NLTRLK+RACR            +C  L+KLSCGSC FG+KG+
Sbjct: 126  STSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSCTFGAKGM 185

Query: 1555 DAVLKGCPLLEELSIKRLRXXXXXXXXXXXXXXXGS-LRSICLKELYNGQCFGPLIAGCR 1379
            +AVL  C  LEELS+KRLR               GS L++ICLK+LYN QCFGPL+ G +
Sbjct: 186  NAVLDNCSALEELSVKRLRGITDSTAEPIGPGIAGSSLKTICLKDLYNAQCFGPLLIGAK 245

Query: 1378 NLKTLKLFRCSGDWDLLLDDIATKVPGIVEIHLEKLQVSDRGLFSISACADLEVLHLVKT 1199
            +L+TLKLFRCSGDWD LL  IA +V G+VE+HLE+LQVSD GL +IS C DLE+LHLVKT
Sbjct: 246  SLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDLEILHLVKT 305

Query: 1198 PECTDAGLAWVAEKCRLLRKIHIDGWKTNRIGDEGLMAVAQRCPNLQELVLIGVNPTARS 1019
            PECT+ G+  +AE+C+LLRK+HIDGWK NRIGDEGL+AVA+ C NLQELVLIGVNPT  S
Sbjct: 306  PECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQELVLIGVNPTKVS 365

Query: 1018 LGLIASNCRNLERLALCGSETFGDQEISCIASKCMALKKLCIKGCPVSD 872
            L ++ASNCRNLERLALCGS+T GD EISCIA+KC+ALKKLCIK CPVSD
Sbjct: 366  LEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSD 414



 Score = 56.2 bits (134), Expect(2) = e-131
 Identities = 31/47 (65%), Positives = 32/47 (68%)
 Frame = -3

Query: 800 GMEALAEGCPNLXXXXXXXXXXVTAEGADWLRASRGSLAVNLDAVGP 660
           GMEALAEGCPNL          VT EGAD LR SRGSLAVNLD+  P
Sbjct: 416 GMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEP 462


>ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240761|gb|ABD32619.1|
            Cyclin-like F-box [Medicago truncatula]
            gi|355478176|gb|AES59379.1| F-box protein [Medicago
            truncatula]
          Length = 547

 Score =  432 bits (1110), Expect(2) = e-128
 Identities = 222/351 (63%), Positives = 255/351 (72%), Gaps = 3/351 (0%)
 Frame = -1

Query: 1915 SLGSGDRKRCSLVCRRWFAVEGQXXXXXXXXXXXXXXXXXXXXXXRFDAVSKLALKCDRR 1736
            SL   DR +CSLVCRRW  VEGQ                      RFD+V+KLALKCDRR
Sbjct: 75   SLNPSDRNQCSLVCRRWLHVEGQSRQRLSLNAKLDLLPVIPSLFNRFDSVTKLALKCDRR 134

Query: 1735 SDSIGDEALALISLRCPNLTRLKIRACRXXXXXXXXXXXAHCPSLRKLSCGSCAFGSKGI 1556
            S SI DEAL +IS RCPNLTRLK+RACR            +C  LRKLSCGSC FGSKG+
Sbjct: 135  SVSIRDEALVIISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLRKLSCGSCTFGSKGM 194

Query: 1555 DAVLKGCPLLEELSIKRLRXXXXXXXXXXXXXXXG--SLRSICLKELYNGQCFGPLIAGC 1382
            +AVL+ C  LEELS+KRLR                  SL++ICLKELYNGQCFG LI G 
Sbjct: 195  NAVLENCAALEELSVKRLRGIAETAVAEPIGPGVAAASLKTICLKELYNGQCFGSLILGA 254

Query: 1381 RNLKTLKLFRCSGDWDLLLDDIATKVPG-IVEIHLEKLQVSDRGLFSISACADLEVLHLV 1205
            +NLKTLKLFRCSGDWD L   +A +V   IVE+H E+LQ+SD GL +IS C++LE+LHLV
Sbjct: 255  KNLKTLKLFRCSGDWDTLFTLMAERVASMIVEVHFERLQISDIGLQAISNCSNLEILHLV 314

Query: 1204 KTPECTDAGLAWVAEKCRLLRKIHIDGWKTNRIGDEGLMAVAQRCPNLQELVLIGVNPTA 1025
            KTPECTD GL  +AE+C+LLRK+HIDGWK NRIGDEGL+AVA+ CPNLQELVLIGVNPT 
Sbjct: 315  KTPECTDMGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTR 374

Query: 1024 RSLGLIASNCRNLERLALCGSETFGDQEISCIASKCMALKKLCIKGCPVSD 872
             SL ++ASNC NLERLALC S+T GD EISCIA+KC+ALKKLCIK CPVSD
Sbjct: 375  VSLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSD 425



 Score = 53.9 bits (128), Expect(2) = e-128
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -3

Query: 800 GMEALAEGCPNLXXXXXXXXXXVTAEGADWLRASRGSLAVNLDAV 666
           GMEALA GCPNL          VT EG DWLR +R S+AVNLDAV
Sbjct: 427 GMEALANGCPNLVKVKVKKCKGVTPEGGDWLRHTRVSVAVNLDAV 471


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