BLASTX nr result

ID: Dioscorea21_contig00010606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010606
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65102.1| CCR4-associated factor 1-related protein [Elaeis ...   260   9e-68
ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
ref|XP_004139505.1| PREDICTED: probable CCR4-associated factor 1...   231   6e-59
ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus co...   230   1e-58
ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1...   228   5e-58

>gb|AFS65102.1| CCR4-associated factor 1-related protein [Elaeis guineensis]
          Length = 276

 Score =  260 bits (664), Expect = 9e-68
 Identities = 124/181 (68%), Positives = 150/181 (82%), Gaps = 9/181 (4%)
 Frame = -2

Query: 518 MDTEFPGVIHRSHLHPLVLSPSDRYSLLKSNVDALHLIQIGLTLSDHSG---------AA 366
           MDTEFPGV+HR   HP +LS ++RY+LLKSNVDALHLIQ+GLTLSD +G         A 
Sbjct: 40  MDTEFPGVVHRPRKHPFLLSSAERYALLKSNVDALHLIQVGLTLSDAAGELPDLGTDGAT 99

Query: 365 RFVWEFNLKDFDLRRDEHAPESIDLLRSHGMDFDENRERGIDSARFAELMMASGLLCNDS 186
           RFVWEFN +DFD R D H+PESI+LLR++G+DFD+NR RG+DS RFAEL+M+SGL+CNDS
Sbjct: 100 RFVWEFNFRDFDPRCDRHSPESIELLRANGVDFDKNRARGVDSRRFAELLMSSGLVCNDS 159

Query: 185 AVSWVTFHSAYDFGYLIKVLTGRLLPKRMEEFLDLVRVFFGEKVFDVKYMMRYCEGLCGG 6
           AVSWVTFHSAYDFGYLIK+LT R LP+ M EFL LV VFFG +V+D+K+MM+YC+ L GG
Sbjct: 160 AVSWVTFHSAYDFGYLIKILTCRKLPRTMAEFLGLVGVFFGNRVYDMKHMMKYCDSLYGG 219

Query: 5   L 3
           L
Sbjct: 220 L 220


>ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|222837629|gb|EEE75994.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  232 bits (591), Expect = 3e-59
 Identities = 115/186 (61%), Positives = 140/186 (75%), Gaps = 14/186 (7%)
 Frame = -2

Query: 518 MDTEFPGVIHRSHLHPL-------VLSPSDRYSLLKSNVDALHLIQIGLTLSDHSG---- 372
           MDTEFPGV+ R  + P         L PSD Y +LKSNVDAL+LIQ+GLTLSD  G    
Sbjct: 36  MDTEFPGVVFRPPVDPTNNRNYFRQLKPSDHYKILKSNVDALNLIQVGLTLSDAEGNLPD 95

Query: 371 ---AARFVWEFNLKDFDLRRDEHAPESIDLLRSHGMDFDENRERGIDSARFAELMMASGL 201
                RF+WEFN +DFD+ RD HAP+SI+LLR  G+DF+ NRE G+DSARFAELMM+SGL
Sbjct: 96  LGTGNRFIWEFNFRDFDVERDSHAPDSIELLRRQGIDFERNREEGVDSARFAELMMSSGL 155

Query: 200 LCNDSAVSWVTFHSAYDFGYLIKVLTGRLLPKRMEEFLDLVRVFFGEKVFDVKYMMRYCE 21
           +CN+S VSWVTFHSAYDFGYL+K+LT R LP  +  FL L+RVFFG  ++DVK+MMR+C+
Sbjct: 156 VCNES-VSWVTFHSAYDFGYLVKILTRRELPSGLVGFLSLLRVFFGNNIYDVKHMMRFCK 214

Query: 20  GLCGGL 3
            L GGL
Sbjct: 215 SLYGGL 220


>ref|XP_004139505.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like
           [Cucumis sativus]
          Length = 277

 Score =  231 bits (588), Expect = 6e-59
 Identities = 116/181 (64%), Positives = 139/181 (76%), Gaps = 9/181 (4%)
 Frame = -2

Query: 518 MDTEFPGVIHRSHLHPLVLS-PSDRYSLLKSNVDALHLIQIGLTLSDH--------SGAA 366
           MDTEFPGVI      P   + PS  Y  LKSNVD LHLIQIG+TLSD         +G  
Sbjct: 42  MDTEFPGVIFPQQDIPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDT 101

Query: 365 RFVWEFNLKDFDLRRDEHAPESIDLLRSHGMDFDENRERGIDSARFAELMMASGLLCNDS 186
           RF+WEFN KDFD+ RD HAP SI+LLR  G+DFD NRE GIDS+RFAELMM+SGL+CNDS
Sbjct: 102 RFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDS 161

Query: 185 AVSWVTFHSAYDFGYLIKVLTGRLLPKRMEEFLDLVRVFFGEKVFDVKYMMRYCEGLCGG 6
            VSWVTFHSAYDFGYL+K+LT + LPK +E+FL +VR+FFG+ V+D+KY+MR+C+ L GG
Sbjct: 162 -VSWVTFHSAYDFGYLVKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGG 220

Query: 5   L 3
           L
Sbjct: 221 L 221


>ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223536950|gb|EEF38588.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 281

 Score =  230 bits (586), Expect = 1e-58
 Identities = 114/179 (63%), Positives = 141/179 (78%), Gaps = 7/179 (3%)
 Frame = -2

Query: 518 MDTEFPGVIHRSHLHPLVLSPSDRYSLLKSNVDALHLIQIGLTLSDHSG-------AARF 360
           MDTEFPG++ ++  H     PSD Y+LLKSNVDAL+LIQ+GLTLSD  G       A RF
Sbjct: 47  MDTEFPGLVFKNPHHSR--RPSDHYTLLKSNVDALNLIQVGLTLSDSRGNLPDLATATRF 104

Query: 359 VWEFNLKDFDLRRDEHAPESIDLLRSHGMDFDENRERGIDSARFAELMMASGLLCNDSAV 180
           +WEFN +DFD+ RD HAP+SI+LLR  G+DF  N + GI SARFAELMM+SGL+CNDS V
Sbjct: 105 IWEFNFRDFDVSRDAHAPDSIELLRRQGIDFRRNTQEGIPSARFAELMMSSGLVCNDS-V 163

Query: 179 SWVTFHSAYDFGYLIKVLTGRLLPKRMEEFLDLVRVFFGEKVFDVKYMMRYCEGLCGGL 3
           SWVTFHSAYDFGYL+K+LT R LP  +EEF+ LV+VFFG++V+DVK++MR+C  L GGL
Sbjct: 164 SWVTFHSAYDFGYLVKILTRRSLPGGLEEFMRLVKVFFGDRVYDVKHIMRFCHSLYGGL 222


>ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Vitis
           vinifera]
          Length = 278

 Score =  228 bits (580), Expect = 5e-58
 Identities = 114/182 (62%), Positives = 138/182 (75%), Gaps = 10/182 (5%)
 Frame = -2

Query: 518 MDTEFPGVIHR---SHLHPLVLSPSDRYSLLKSNVDALHLIQIGLTLSDHSG-------A 369
           MDTEFPGV+ R         +  PSD Y  LKSNVDAL LIQ+GLTLSD +G        
Sbjct: 42  MDTEFPGVVFRPSGGEQQFRLRRPSDHYRFLKSNVDALCLIQVGLTLSDANGNLPDLGTG 101

Query: 368 ARFVWEFNLKDFDLRRDEHAPESIDLLRSHGMDFDENRERGIDSARFAELMMASGLLCND 189
            RF+WEFN +DFD+ RD HAP+SI+LL   G+DFD NRE G+DSARFAELMM+SGL+CN+
Sbjct: 102 NRFIWEFNFRDFDVARDAHAPDSIELLSRQGIDFDRNREEGVDSARFAELMMSSGLVCNE 161

Query: 188 SAVSWVTFHSAYDFGYLIKVLTGRLLPKRMEEFLDLVRVFFGEKVFDVKYMMRYCEGLCG 9
           S VSWVTFHSAYDFGYL+K+LT R LP  +EEFL ++RVFFG KV+DVK++M++C  L G
Sbjct: 162 S-VSWVTFHSAYDFGYLVKILTRRSLPSGLEEFLSILRVFFGTKVYDVKHLMKFCASLYG 220

Query: 8   GL 3
           GL
Sbjct: 221 GL 222


Top