BLASTX nr result

ID: Dioscorea21_contig00010558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010558
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   130   3e-28
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   129   1e-27
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   127   5e-27
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...   124   3e-26
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  130 bits (328), Expect = 3e-28
 Identities = 70/90 (77%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = -2

Query: 603 GLLTAASPVQVVVGSFIADRRKEPKSTNFSDPASAPGKIAPIG-MAGPSSPLSRGTQSES 427
           GLLTAASPVQVVVGSFIAD +KEPK T  SDP  APGK+A  G  AG +SP SRGT SES
Sbjct: 273 GLLTAASPVQVVVGSFIADGKKEPKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSES 332

Query: 426 S-GGPGSPLNQSTGTCNNNNQQGLPSMPWK 340
           S GGPGSPLNQSTGTCNN+NQQGL +MPWK
Sbjct: 333 SGGGPGSPLNQSTGTCNNSNQQGLSNMPWK 362



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 51/65 (78%), Positives = 52/65 (80%)
 Frame = -3

Query: 932 MSFSQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 753
           MSFSQ+GPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI             GQRS
Sbjct: 191 MSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSESGGQRS 250

Query: 752 RTGGL 738
           RTGGL
Sbjct: 251 RTGGL 255


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
           gi|297745600|emb|CBI40765.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  129 bits (323), Expect = 1e-27
 Identities = 66/92 (71%), Positives = 74/92 (80%), Gaps = 4/92 (4%)
 Frame = -2

Query: 603 GLLTAASPVQVVVGSFIADRRKEPKSTNFSDPASAPGKIAPIG----MAGPSSPLSRGTQ 436
           GLLTAASPVQVVVGSFIAD RKE KS +  +P+SAP KIAP+G    + G SSP SRGT 
Sbjct: 262 GLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTL 321

Query: 435 SESSGGPGSPLNQSTGTCNNNNQQGLPSMPWK 340
           SESSGGPGSPLNQSTG CNN+N  G+ S+PWK
Sbjct: 322 SESSGGPGSPLNQSTGACNNSNPPGMTSIPWK 353



 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 50/65 (76%), Positives = 51/65 (78%)
 Frame = -3

Query: 932 MSFSQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 753
           MSFSQ+GPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 180 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 239

Query: 752 RTGGL 738
           RTGGL
Sbjct: 240 RTGGL 244


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  127 bits (318), Expect = 5e-27
 Identities = 65/91 (71%), Positives = 73/91 (80%), Gaps = 4/91 (4%)
 Frame = -2

Query: 603 GLLTAASPVQVVVGSFIADRRKEPKSTNFSDPASAPGKIAPIG----MAGPSSPLSRGTQ 436
           GLLTAASPVQVVVGSFIAD RKE KS +  +P+SAP KIAP+G    + G SSP SRGT 
Sbjct: 262 GLLTAASPVQVVVGSFIADGRKESKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTL 321

Query: 435 SESSGGPGSPLNQSTGTCNNNNQQGLPSMPW 343
           SESSGGPGSPLNQSTG CNN+N  G+ S+PW
Sbjct: 322 SESSGGPGSPLNQSTGACNNSNPPGMTSIPW 352



 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 50/65 (76%), Positives = 51/65 (78%)
 Frame = -3

Query: 932 MSFSQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 753
           MSFSQ+GPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 180 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 239

Query: 752 RTGGL 738
           RTGGL
Sbjct: 240 RTGGL 244


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
           gi|223551427|gb|EEF52913.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score =  124 bits (311), Expect = 3e-26
 Identities = 63/89 (70%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -2

Query: 603 GLLTAASPVQVVVGSFIADRRKEPKSTNFSDPASAPGKIAPI-GMAGPSSPLSRGTQSES 427
           GLL AASPVQVVV SFI+D RKE KS N  +P SA  ++ P+ G  GPSSP SRGT SES
Sbjct: 286 GLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTFSES 345

Query: 426 SGGPGSPLNQSTGTCNNNNQQGLPSMPWK 340
           SGGPGSPLNQSTG CNN+N QG+ SMPWK
Sbjct: 346 SGGPGSPLNQSTGACNNSNLQGISSMPWK 374



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 49/65 (75%), Positives = 51/65 (78%)
 Frame = -3

Query: 932 MSFSQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 753
           MSFSQ+GPRAVCILSANGAISNVTLRQ ATSGG+VTYEGRFEI             GQRS
Sbjct: 204 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRS 263

Query: 752 RTGGL 738
           RTGGL
Sbjct: 264 RTGGL 268


>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  122 bits (306), Expect = 1e-25
 Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = -2

Query: 603 GLLTAASPVQVVVGSFIADRRKEPKSTNFSDPASAPGKIAPIG-MAGPSSPLSRGTQSES 427
           GLL AA+PVQVVVGSFIAD RKE K+ N ++P+SA  ++ P G   G SSP SRGT SES
Sbjct: 184 GLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSRGTLSES 243

Query: 426 SGGPGSPLNQSTGTCNNNNQQGLPSMPWK 340
           SGGPGSPLNQSTG CNN+N QG+ SMPW+
Sbjct: 244 SGGPGSPLNQSTGACNNSNPQGMSSMPWE 272



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 49/65 (75%), Positives = 51/65 (78%)
 Frame = -3

Query: 932 MSFSQNGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXGQRS 753
           MSFSQ+GPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI             GQRS
Sbjct: 102 MSFSQHGPRAVCILSANGAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRS 161

Query: 752 RTGGL 738
           R+GGL
Sbjct: 162 RSGGL 166


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