BLASTX nr result

ID: Dioscorea21_contig00010536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010536
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           122   2e-26
gb|ABK95217.1| unknown [Populus trichocarpa]                          122   3e-26
ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...   120   9e-26
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   120   1e-25
gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|3079408...   118   6e-25

>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/79 (74%), Positives = 70/79 (88%)
 Frame = +2

Query: 110 MEKMGAVDPQLEDLFKEKKPPRNPLVPVGAFVTAGVLTMGLISFKRGNSQLGQKLMRARV 289
           +EKM +V+P +EDLF+EKK  RNPLVP+GA +TAGVLT GLISF+RGNSQLGQ LMRARV
Sbjct: 12  LEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 71

Query: 290 VAQGATVALMVGSAYFYGE 346
           V QGATVALMVG+ Y+YG+
Sbjct: 72  VVQGATVALMVGTGYYYGD 90


>gb|ABK95217.1| unknown [Populus trichocarpa]
          Length = 86

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/79 (75%), Positives = 68/79 (86%)
 Frame = +2

Query: 110 MEKMGAVDPQLEDLFKEKKPPRNPLVPVGAFVTAGVLTMGLISFKRGNSQLGQKLMRARV 289
           MEKMG  +P  E LF+EKK  RNPLVPVGA +TAGVLT GLISF+RGNSQLGQ LMRARV
Sbjct: 1   MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60

Query: 290 VAQGATVALMVGSAYFYGE 346
           V QGATVALMVG+A++YG+
Sbjct: 61  VVQGATVALMVGTAFYYGD 79


>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/76 (77%), Positives = 68/76 (89%)
 Frame = +2

Query: 119 MGAVDPQLEDLFKEKKPPRNPLVPVGAFVTAGVLTMGLISFKRGNSQLGQKLMRARVVAQ 298
           M AV+P +EDLF+EKK  RNPLVP+GA +TAGVLT GLISF+RGNSQLGQ LMRARVV Q
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 299 GATVALMVGSAYFYGE 346
           GATVALMVG+AY+YG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = +2

Query: 110 MEKMGAVDPQLEDLFKEKKPPRNPLVPVGAFVTAGVLTMGLISFKRGNSQLGQKLMRARV 289
           MEKMG  D +++ LF++KK  +NPLVP+GA +TAGVLT GLISFK+GNS LGQKLMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 290 VAQGATVALMVGSAYFYGEK 349
           V QGATVALM+ +AY+YGEK
Sbjct: 61  VVQGATVALMLSTAYYYGEK 80


>gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|30794087|gb|AAP40486.1|
           unknown protein [Arabidopsis thaliana]
          Length = 81

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/76 (75%), Positives = 67/76 (88%)
 Frame = +2

Query: 119 MGAVDPQLEDLFKEKKPPRNPLVPVGAFVTAGVLTMGLISFKRGNSQLGQKLMRARVVAQ 298
           M +V+P +EDLF+EKK  RNPLVP+GA +TAGVLT GLISF+RGNSQLGQ LMRARVV Q
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 299 GATVALMVGSAYFYGE 346
           GATVALMVG+ Y+YG+
Sbjct: 61  GATVALMVGTGYYYGD 76


Top