BLASTX nr result

ID: Dioscorea21_contig00010535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010535
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   307   2e-81
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...   303   3e-80
ref|NP_194113.1| glycoside hydrolase family 28 protein / polygal...   303   3e-80
emb|CBI34471.3| unnamed protein product [Vitis vinifera]              303   4e-80
ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabi...   301   2e-79

>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score =  307 bits (787), Expect = 2e-81
 Identities = 145/178 (81%), Positives = 159/178 (89%)
 Frame = +2

Query: 407 TCSGIVPMRGRAEVISITDFGGVGDGLTLNTAAFQAAIFRISHLRRRGGTLLYIPAGVWL 586
           TCSGIVPMR R + ISI DFGGVGDG T+NT AF+AAI+RI HL+RRGGTLLYIP GV+L
Sbjct: 28  TCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFL 87

Query: 587 TGSFDLTSHMTLYLAKGAVIKATQDTTKWPLIDPLPSYGRGRELPGRRYKSFIHGNGLHD 766
           TGSF+LTSHMTLYLA+GAVIKATQDT  WPLI PLPSYGRGRE  G RY SFIHG+GLHD
Sbjct: 88  TGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHD 147

Query: 767 VIITGENGTIDGQGDVWWNMWRQRTLPFTRPNLVEFMHSGNILISNTIFQNSPFWNIH 940
           V+ITGENGTIDGQGD+WWNMWRQRTL FTRPNLVEF++S  I+ISN IFQNSPFWNIH
Sbjct: 148 VVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIH 205


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score =  303 bits (777), Expect = 3e-80
 Identities = 143/180 (79%), Positives = 161/180 (89%)
 Frame = +2

Query: 401 AATCSGIVPMRGRAEVISITDFGGVGDGLTLNTAAFQAAIFRISHLRRRGGTLLYIPAGV 580
           AATCS IVP+R R++ ISITDFGGVGDG TLNT AF+AA++RI HLRRRGGT+LY+P GV
Sbjct: 25  AATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGV 84

Query: 581 WLTGSFDLTSHMTLYLAKGAVIKATQDTTKWPLIDPLPSYGRGRELPGRRYKSFIHGNGL 760
           +LT SF+LTSHMTLYLA GAVIKATQ+   WPLI PLPSYGRGRELPG RY SFIHG+GL
Sbjct: 85  YLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGL 144

Query: 761 HDVIITGENGTIDGQGDVWWNMWRQRTLPFTRPNLVEFMHSGNILISNTIFQNSPFWNIH 940
            DV+ITGENGTIDGQGDVWWNMWRQRTL FTRPNLVEF++S +I+ISN IF+NSPFWNIH
Sbjct: 145 SDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIH 204


>ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
           (pectinase) family protein [Arabidopsis thaliana]
           gi|4454051|emb|CAA23048.1| putative polygalacturonase
           [Arabidopsis thaliana] gi|7269231|emb|CAB81300.1|
           putative polygalacturonase [Arabidopsis thaliana]
           gi|17065242|gb|AAL32775.1| putative polygalacturonase
           [Arabidopsis thaliana] gi|22136230|gb|AAM91193.1|
           putative polygalacturonase [Arabidopsis thaliana]
           gi|332659410|gb|AEE84810.1| glycoside hydrolase family
           28 protein / polygalacturonase (pectinase) family
           protein [Arabidopsis thaliana]
          Length = 444

 Score =  303 bits (777), Expect = 3e-80
 Identities = 142/179 (79%), Positives = 158/179 (88%)
 Frame = +2

Query: 404 ATCSGIVPMRGRAEVISITDFGGVGDGLTLNTAAFQAAIFRISHLRRRGGTLLYIPAGVW 583
           ATCSGIVP+R R + ISITDFGGVGDG T+NT AF+AAI+RI HL+RRGGTLLYIP GV+
Sbjct: 26  ATCSGIVPLRYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVY 85

Query: 584 LTGSFDLTSHMTLYLAKGAVIKATQDTTKWPLIDPLPSYGRGRELPGRRYKSFIHGNGLH 763
           LT SF+LTSHMTLYLAKGAVI+A QDT  WPLIDPLPSYGRGRELPG RY SFIHG+GL 
Sbjct: 86  LTESFNLTSHMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLR 145

Query: 764 DVIITGENGTIDGQGDVWWNMWRQRTLPFTRPNLVEFMHSGNILISNTIFQNSPFWNIH 940
           DV+ITG+NGTIDGQG+VWWNMWR RTL +TRPNL+EF  S  I+ISN IFQNSPFWNIH
Sbjct: 146 DVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIH 204


>emb|CBI34471.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  303 bits (776), Expect = 4e-80
 Identities = 143/178 (80%), Positives = 159/178 (89%)
 Frame = +2

Query: 407 TCSGIVPMRGRAEVISITDFGGVGDGLTLNTAAFQAAIFRISHLRRRGGTLLYIPAGVWL 586
           TCSGIVPMR R +VISI DFGGVGDG TLNT AF+AAI+RI HLRRRGGTLLYIP GV+L
Sbjct: 29  TCSGIVPMRHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYL 88

Query: 587 TGSFDLTSHMTLYLAKGAVIKATQDTTKWPLIDPLPSYGRGRELPGRRYKSFIHGNGLHD 766
           T SF+LTSHMTLYL+K AVI+ATQDT  WPLI PLPSYGRGRELPG RY SFIH +G+HD
Sbjct: 89  TESFNLTSHMTLYLSKDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHD 148

Query: 767 VIITGENGTIDGQGDVWWNMWRQRTLPFTRPNLVEFMHSGNILISNTIFQNSPFWNIH 940
           VIITGENGTIDGQG+VWWNMWRQRTL FTRPNL+E ++S NI+ISN IF++SPFWNIH
Sbjct: 149 VIITGENGTIDGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIH 206


>ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313524|gb|EFH43947.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score =  301 bits (770), Expect = 2e-79
 Identities = 140/179 (78%), Positives = 157/179 (87%)
 Frame = +2

Query: 404 ATCSGIVPMRGRAEVISITDFGGVGDGLTLNTAAFQAAIFRISHLRRRGGTLLYIPAGVW 583
           ATCSGIVP+R R + ISITD+GGVGDG T+NT AF+AAI+RI HL+RRGGTLLYIP GV+
Sbjct: 26  ATCSGIVPLRYRYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVY 85

Query: 584 LTGSFDLTSHMTLYLAKGAVIKATQDTTKWPLIDPLPSYGRGRELPGRRYKSFIHGNGLH 763
           LT SF+LTSHMT YLAKGAVI+A QDT  WPLIDPLPSYGRGRELPG RY SFIHG+GL 
Sbjct: 86  LTESFNLTSHMTFYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLR 145

Query: 764 DVIITGENGTIDGQGDVWWNMWRQRTLPFTRPNLVEFMHSGNILISNTIFQNSPFWNIH 940
           DV+ITG+NGTIDGQG+VWWNMWR RTL +TRPNL+EF  S  I+ISN IFQNSPFWNIH
Sbjct: 146 DVVITGQNGTIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIH 204


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