BLASTX nr result

ID: Dioscorea21_contig00010511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010511
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]      371   e-100
ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [...   370   e-100
ref|NP_001062333.1| Os08g0531300 [Oryza sativa Japonica Group] g...   363   3e-98
gb|EEC83936.1| hypothetical protein OsI_30017 [Oryza sativa Indi...   363   3e-98
ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|2...   363   4e-98

>gb|ABK96713.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 313

 Score =  371 bits (952), Expect = e-100
 Identities = 184/250 (73%), Positives = 212/250 (84%), Gaps = 2/250 (0%)
 Frame = +1

Query: 136 SLLKKRNPKRLKYSTQRLYKDDRMPMLYVEMDPLRVDTWKLEPVIKLIKDGAVGVIPTDT 315
           S+  KR+PKRLKYS  R  K+D +  LYVE D L  DTWKLEPVI+L+K GAVGVIPTDT
Sbjct: 49  SMAIKRSPKRLKYSAPRFTKEDGL--LYVEADELGSDTWKLEPVIELLKQGAVGVIPTDT 106

Query: 316 VYSIVCDLKSHSSIERLRRIKDIRSSKPLSILCHSLQDIDTYTTGFPRGNAQGQANIFRA 495
           VY+IVCDLKS+S+IERLRRIK+I  SKPLSILCHSL+DIDTYTTGFPRG+ QG A+IFRA
Sbjct: 107 VYAIVCDLKSNSAIERLRRIKNIEPSKPLSILCHSLRDIDTYTTGFPRGDGQGHADIFRA 166

Query: 496 VKHCLPGPYTFILPATKALPKQCIRHGTTT-KFVSRKNVGVRIPDDTICQAILNNLDAPL 672
           VKHCLPGPYTFIL A+K LPKQC+R GTTT K+ SRKNVG+R+PDD ICQAIL  +DAPL
Sbjct: 167 VKHCLPGPYTFILTASKELPKQCVRFGTTTAKYASRKNVGIRMPDDAICQAILEKMDAPL 226

Query: 673 ISTSVES-AEDQWIIDPIIIADTYGPEGLDFIVDGGTRIADPSTVVDMTRNPPTIIRQGK 849
           ISTSV S  E++W+IDP++IAD YG EGLDF+V+GG R+ADPSTVVDMT + P IIRQGK
Sbjct: 227 ISTSVRSPKENEWMIDPVVIADIYGLEGLDFVVNGGIRVADPSTVVDMTGSSPKIIRQGK 286

Query: 850 GPKQEWMVVE 879
           GPK  WMV E
Sbjct: 287 GPKLHWMVAE 296


>ref|XP_002273946.1| PREDICTED: uncharacterized protein HI_1198 [Vitis vinifera]
           gi|296082345|emb|CBI21350.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  370 bits (951), Expect = e-100
 Identities = 184/252 (73%), Positives = 210/252 (83%), Gaps = 2/252 (0%)
 Frame = +1

Query: 130 FTSLLKKRNPKRLKYSTQRLYKDDRMPMLYVEMDPLRVDTWKLEPVIKLIKDGAVGVIPT 309
           F +L  KR+PKRLKYS  R  K+D +  LYVE DP   D+WKLEPV  L+K+GAVGVIPT
Sbjct: 39  FVALAAKRSPKRLKYSAPRFSKEDGL--LYVEADPSGTDSWKLEPVADLLKEGAVGVIPT 96

Query: 310 DTVYSIVCDLKSHSSIERLRRIKDIRSSKPLSILCHSLQDIDTYTTGFPRGNAQGQANIF 489
           DTVY+IVC L+SHS+IERLRRIKDI +SKPLSILC SL+DIDTYTTGFP G  QGQ NIF
Sbjct: 97  DTVYAIVCHLRSHSAIERLRRIKDIEASKPLSILCRSLRDIDTYTTGFPCGIGQGQTNIF 156

Query: 490 RAVKHCLPGPYTFILPATKALPKQCIRHGTTT-KFVSRKNVGVRIPDDTICQAILNNLDA 666
           RAVKHCLPGPYTFIL A+K LPKQC R+GTTT K+ SRKNVGVR+PDD IC+AIL  +DA
Sbjct: 157 RAVKHCLPGPYTFILTASKELPKQCTRYGTTTAKYASRKNVGVRMPDDAICKAILQMMDA 216

Query: 667 PLISTSVES-AEDQWIIDPIIIADTYGPEGLDFIVDGGTRIADPSTVVDMTRNPPTIIRQ 843
           PLI+TSV+S  E++W++DPI IAD YGPEGLDF+VDGG R+ADPSTVVDMT   P IIRQ
Sbjct: 217 PLIATSVKSPKENEWMLDPITIADVYGPEGLDFVVDGGVRVADPSTVVDMTGRTPKIIRQ 276

Query: 844 GKGPKQEWMVVE 879
           GKGPKQ WMV E
Sbjct: 277 GKGPKQPWMVSE 288


>ref|NP_001062333.1| Os08g0531300 [Oryza sativa Japonica Group]
           gi|42407889|dbj|BAD09030.1| translation factor-like
           [Oryza sativa Japonica Group]
           gi|42761369|dbj|BAD11637.1| translation factor-like
           [Oryza sativa Japonica Group]
           gi|113624302|dbj|BAF24247.1| Os08g0531300 [Oryza sativa
           Japonica Group] gi|222640922|gb|EEE69054.1| hypothetical
           protein OsJ_28055 [Oryza sativa Japonica Group]
          Length = 313

 Score =  363 bits (932), Expect = 3e-98
 Identities = 177/247 (71%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +1

Query: 142 LKKRNPKRLKYSTQRLYKDDRMPMLYVEMDPLRVDTWKLEPVIKLIKDGAVGVIPTDTVY 321
           L KRNPKRLKY++QR +      ML V+++P   D WKLEPV++LI  GAVG+IPTDTVY
Sbjct: 52  LHKRNPKRLKYASQRQFTRGDAGMLRVQVEPSGEDAWKLEPVVELINRGAVGIIPTDTVY 111

Query: 322 SIVCDLKSHSSIERLRRIKDIRSSKPLSILCHSLQDIDTYTTGFPRGNAQGQANIFRAVK 501
           SIVCDL ++ S+ERLRRIK I  SKPLSILC SL+DIDTYTTGFPRG  QGQANIFRAVK
Sbjct: 112 SIVCDLSNNDSVERLRRIKGIGDSKPLSILCRSLRDIDTYTTGFPRGTNQGQANIFRAVK 171

Query: 502 HCLPGPYTFILPATKALPKQCIRHGTTTKFVSRKNVGVRIPDDTICQAILNNLDAPLIST 681
             +PGPYTFILPATK LPKQCIRHG++T++  R+ VGVR+PDD IC+AIL NLD PLI T
Sbjct: 172 RVIPGPYTFILPATKELPKQCIRHGSSTRYAKRRQVGVRLPDDPICEAILQNLDEPLICT 231

Query: 682 SVES-AEDQWIIDPIIIADTYGPEGLDFIVDGGTRIADPSTVVDMTRNPPTIIRQGKGPK 858
           SV+S +ED+WI+DP+IIAD Y  +GLDFIVDGGTRIADPSTVVDMT + PTIIRQGKGPK
Sbjct: 232 SVKSLSEDEWILDPVIIADIYEQQGLDFIVDGGTRIADPSTVVDMTGSYPTIIRQGKGPK 291

Query: 859 QEWMVVE 879
            +WMV E
Sbjct: 292 LDWMVAE 298


>gb|EEC83936.1| hypothetical protein OsI_30017 [Oryza sativa Indica Group]
          Length = 314

 Score =  363 bits (932), Expect = 3e-98
 Identities = 177/247 (71%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +1

Query: 142 LKKRNPKRLKYSTQRLYKDDRMPMLYVEMDPLRVDTWKLEPVIKLIKDGAVGVIPTDTVY 321
           L KRNPKRLKY++QR +      ML V+++P   D WKLEPV++LI  GAVG+IPTDTVY
Sbjct: 53  LHKRNPKRLKYASQRQFTRGDAGMLRVQVEPSGEDAWKLEPVVELINRGAVGIIPTDTVY 112

Query: 322 SIVCDLKSHSSIERLRRIKDIRSSKPLSILCHSLQDIDTYTTGFPRGNAQGQANIFRAVK 501
           SIVCDL ++ S+ERLRRIK I  SKPLSILC SL+DIDTYTTGFPRG  QGQANIFRAVK
Sbjct: 113 SIVCDLSNNDSVERLRRIKGIGDSKPLSILCRSLRDIDTYTTGFPRGTNQGQANIFRAVK 172

Query: 502 HCLPGPYTFILPATKALPKQCIRHGTTTKFVSRKNVGVRIPDDTICQAILNNLDAPLIST 681
             +PGPYTFILPATK LPKQCIRHG++T++  R+ VGVR+PDD IC+AIL NLD PLI T
Sbjct: 173 RVIPGPYTFILPATKELPKQCIRHGSSTRYAKRRQVGVRLPDDPICEAILQNLDEPLICT 232

Query: 682 SVES-AEDQWIIDPIIIADTYGPEGLDFIVDGGTRIADPSTVVDMTRNPPTIIRQGKGPK 858
           SV+S +ED+WI+DP+IIAD Y  +GLDFIVDGGTRIADPSTVVDMT + PTIIRQGKGPK
Sbjct: 233 SVKSLSEDEWILDPVIIADIYEQQGLDFIVDGGTRIADPSTVVDMTGSYPTIIRQGKGPK 292

Query: 859 QEWMVVE 879
            +WMV E
Sbjct: 293 LDWMVAE 299


>ref|XP_002298628.1| predicted protein [Populus trichocarpa] gi|222845886|gb|EEE83433.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  363 bits (931), Expect = 4e-98
 Identities = 183/259 (70%), Positives = 212/259 (81%), Gaps = 11/259 (4%)
 Frame = +1

Query: 136 SLLKKRNPKRLKYSTQRLYKDDRMPMLYVEMDPLRVDTWKLEPVIKLIKDGAVGVIPTDT 315
           S+  KR+PKRLKYS  R  K+D +  LYVE D L  DTWKLEPVI+L+K GAVGVIPTDT
Sbjct: 49  SMAIKRSPKRLKYSAPRFTKEDGL--LYVEADELGSDTWKLEPVIELLKQGAVGVIPTDT 106

Query: 316 VYSIVCDLKSHSSIERLRRIKDIRSSK---------PLSILCHSLQDIDTYTTGFPRGNA 468
           VY+IVCDLKS+S+IERLRRIK+I  SK         PL ILCHSL+DIDTYTTGFPRG+ 
Sbjct: 107 VYAIVCDLKSNSAIERLRRIKNIEPSKARNMASLHSPLYILCHSLRDIDTYTTGFPRGDG 166

Query: 469 QGQANIFRAVKHCLPGPYTFILPATKALPKQCIRHGTTT-KFVSRKNVGVRIPDDTICQA 645
           QG A+IFRAVKHCLPGPYTFIL A+K LPKQC+R+GTTT K+ SRKNVG+R+PDD ICQA
Sbjct: 167 QGHADIFRAVKHCLPGPYTFILTASKELPKQCVRYGTTTAKYASRKNVGIRMPDDAICQA 226

Query: 646 ILNNLDAPLISTSVES-AEDQWIIDPIIIADTYGPEGLDFIVDGGTRIADPSTVVDMTRN 822
           IL  +DAPLISTSV S  E++W+IDP++IAD YG EGLDF+V+GG R+ADPSTVVDMT +
Sbjct: 227 ILEKMDAPLISTSVRSPKENEWMIDPVVIADIYGAEGLDFVVNGGIRVADPSTVVDMTGS 286

Query: 823 PPTIIRQGKGPKQEWMVVE 879
            P IIRQGKGPK  WMV E
Sbjct: 287 SPKIIRQGKGPKLHWMVAE 305


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