BLASTX nr result
ID: Dioscorea21_contig00010509
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00010509 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524303.1| polypyrimidine tract binding protein, putati... 90 2e-16 gb|ADE76165.1| unknown [Picea sitchensis] 89 3e-16 ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding prot... 89 4e-16 ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot... 89 4e-16 ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 >ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis] gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis] Length = 437 Score = 89.7 bits (221), Expect = 2e-16 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = -1 Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50 HGTIV++KLFE+NGKKQAL+LFE EEQATEALVCKHA S+ IIRISFSQLQ+I Sbjct: 379 HGTIVNTKLFEMNGKKQALVLFETEEQATEALVCKHAISVAGSIIRISFSQLQSI 433 >gb|ADE76165.1| unknown [Picea sitchensis] Length = 461 Score = 89.4 bits (220), Expect = 3e-16 Identities = 43/55 (78%), Positives = 50/55 (90%) Frame = -1 Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50 HG+I++SKLFE NGKKQALILF +EEQATEALVCKHAS+ID IR+SFSQLQ+I Sbjct: 404 HGSIINSKLFEANGKKQALILFANEEQATEALVCKHASAIDGSTIRLSFSQLQSI 458 >ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform 2 [Vitis vinifera] Length = 412 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/55 (80%), Positives = 48/55 (87%) Frame = -1 Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50 HG+IV++KLFE NGKKQAL+LFE EEQATEALVCKHAS ID IRISFSQLQ I Sbjct: 358 HGSIVNTKLFEANGKKQALVLFETEEQATEALVCKHASLIDGSTIRISFSQLQAI 412 >ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform 1 [Vitis vinifera] Length = 448 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/55 (80%), Positives = 48/55 (87%) Frame = -1 Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50 HG+IV++KLFE NGKKQAL+LFE EEQATEALVCKHAS ID IRISFSQLQ I Sbjct: 394 HGSIVNTKLFEANGKKQALVLFETEEQATEALVCKHASLIDGSTIRISFSQLQAI 448 >ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa] Length = 436 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/55 (76%), Positives = 51/55 (92%) Frame = -1 Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50 HGTIV++KLFE+NGKKQAL+LFE EE+ATEALVCKHA+S+ I+RISFSQLQ+I Sbjct: 378 HGTIVNTKLFEMNGKKQALVLFETEEEATEALVCKHATSLAGSIVRISFSQLQSI 432