BLASTX nr result

ID: Dioscorea21_contig00010509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00010509
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524303.1| polypyrimidine tract binding protein, putati...    90   2e-16
gb|ADE76165.1| unknown [Picea sitchensis]                              89   3e-16
ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding prot...    89   4e-16
ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...    89   4e-16
ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223536394|gb|EEF38043.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 437

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = -1

Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50
           HGTIV++KLFE+NGKKQAL+LFE EEQATEALVCKHA S+   IIRISFSQLQ+I
Sbjct: 379 HGTIVNTKLFEMNGKKQALVLFETEEQATEALVCKHAISVAGSIIRISFSQLQSI 433


>gb|ADE76165.1| unknown [Picea sitchensis]
          Length = 461

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/55 (78%), Positives = 50/55 (90%)
 Frame = -1

Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50
           HG+I++SKLFE NGKKQALILF +EEQATEALVCKHAS+ID   IR+SFSQLQ+I
Sbjct: 404 HGSIINSKLFEANGKKQALILFANEEQATEALVCKHASAIDGSTIRLSFSQLQSI 458


>ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           isoform 2 [Vitis vinifera]
          Length = 412

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = -1

Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50
           HG+IV++KLFE NGKKQAL+LFE EEQATEALVCKHAS ID   IRISFSQLQ I
Sbjct: 358 HGSIVNTKLFEANGKKQALVLFETEEQATEALVCKHASLIDGSTIRISFSQLQAI 412


>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           isoform 1 [Vitis vinifera]
          Length = 448

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = -1

Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50
           HG+IV++KLFE NGKKQAL+LFE EEQATEALVCKHAS ID   IRISFSQLQ I
Sbjct: 394 HGSIVNTKLFEANGKKQALVLFETEEQATEALVCKHASLIDGSTIRISFSQLQAI 448


>ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|222843893|gb|EEE81440.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -1

Query: 214 HGTIVSSKLFEVNGKKQALILFEDEEQATEALVCKHASSIDSCIIRISFSQLQTI 50
           HGTIV++KLFE+NGKKQAL+LFE EE+ATEALVCKHA+S+   I+RISFSQLQ+I
Sbjct: 378 HGTIVNTKLFEMNGKKQALVLFETEEEATEALVCKHATSLAGSIVRISFSQLQSI 432


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