BLASTX nr result

ID: Dioscorea21_contig00009997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009997
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441539.1| hypothetical protein SORBIDRAFT_09g028970 [S...   162   3e-38
gb|EEE62727.1| hypothetical protein OsJ_17530 [Oryza sativa Japo...   159   3e-37
ref|NP_001054915.1| Os05g0210500 [Oryza sativa Japonica Group] g...   159   3e-37
gb|AFW79243.1| putative timeless C-term domain and Homeodomain p...   157   8e-37
ref|XP_003565892.1| PREDICTED: protein timeless homolog [Brachyp...   157   1e-36

>ref|XP_002441539.1| hypothetical protein SORBIDRAFT_09g028970 [Sorghum bicolor]
            gi|241946824|gb|EES19969.1| hypothetical protein
            SORBIDRAFT_09g028970 [Sorghum bicolor]
          Length = 1309

 Score =  162 bits (410), Expect = 3e-38
 Identities = 92/172 (53%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
 Frame = -3

Query: 516  RFCDDLDLYPMLYQLSLMTTFHEILAEQKSSVSNEYKNIVDFLSKVSRRMLRTIKRQPLL 337
            RFC+DL+L PMLYQLSL+TTF++ILAE+KSS S EY NIV+FLSKV R+MLR+IK+QPLL
Sbjct: 814  RFCEDLELSPMLYQLSLLTTFYDILAEEKSSSSKEYTNIVNFLSKVVRKMLRSIKKQPLL 873

Query: 336  FVEMLFWKTRKECHCINAEVLQGDLNRLKGEIRNFDGEVGQPNDRAGSTYKSMAESLGDD 157
            FV++LFWKTRKECHCI+A++L   LN LK +  N DGE+G      G    ++A+SLGDD
Sbjct: 874  FVDILFWKTRKECHCIDADLL---LNELKKDAGNKDGEIGSSKGWRGPV--NIADSLGDD 928

Query: 156  EADVFI-QHNFNDQRLGN-SLDALWKDFPNSKRSVGSQSSPPSMLDGDSDKN 7
            E D+ I Q  ++  + G+ S D    DF  S  +   +S   S+ D D+++N
Sbjct: 929  EVDLVIPQAPYDADKDGDLSADEHGDDFRKSSTTY-KRSRFMSLSDSDAEEN 979


>gb|EEE62727.1| hypothetical protein OsJ_17530 [Oryza sativa Japonica Group]
          Length = 1140

 Score =  159 bits (401), Expect = 3e-37
 Identities = 87/174 (50%), Positives = 121/174 (69%), Gaps = 4/174 (2%)
 Frame = -3

Query: 516  RFCDDLDLYPMLYQLSLMTTFHEILAEQKSSVSNEYKNIVDFLSKVSRRMLRTIKRQPLL 337
            RFC+DL+L PMLYQLSL+TTF++ILA++KSS S EY NIV+FLSK+ R+MLR +K+QPLL
Sbjct: 681  RFCEDLELAPMLYQLSLLTTFYDILADEKSSNSKEYTNIVNFLSKIVRKMLRVMKKQPLL 740

Query: 336  FVEMLFWKTRKECHCINAEVLQGDLNRLKGEIRNFDGEVGQPNDRAGSTYKSMAESLGDD 157
            FV++LFWKTRKECHCI+A+ L  D+ +   +  N  GE+G      GS   ++A+SLGDD
Sbjct: 741  FVDVLFWKTRKECHCIDADALLSDITK---DATNKGGEIGSSKGWRGSI--NIADSLGDD 795

Query: 156  EADVFIQHN-FNDQRLGNSLDALWKDFPNSKRSVGSQSSPPSML---DGDSDKN 7
            E D+ I H  +N  +  +S     +D   SKRS+G+ +    +L   D ++D N
Sbjct: 796  EVDLVIPHEPYNADKDDDSSSGEHEDV--SKRSMGATNKSNRILSFSDSEADDN 847


>ref|NP_001054915.1| Os05g0210500 [Oryza sativa Japonica Group] gi|48475107|gb|AAT44176.1|
            unknown protein [Oryza sativa Japonica Group]
            gi|113578466|dbj|BAF16829.1| Os05g0210500 [Oryza sativa
            Japonica Group]
          Length = 1226

 Score =  159 bits (401), Expect = 3e-37
 Identities = 87/174 (50%), Positives = 121/174 (69%), Gaps = 4/174 (2%)
 Frame = -3

Query: 516  RFCDDLDLYPMLYQLSLMTTFHEILAEQKSSVSNEYKNIVDFLSKVSRRMLRTIKRQPLL 337
            RFC+DL+L PMLYQLSL+TTF++ILA++KSS S EY NIV+FLSK+ R+MLR +K+QPLL
Sbjct: 699  RFCEDLELAPMLYQLSLLTTFYDILADEKSSNSKEYTNIVNFLSKIVRKMLRVMKKQPLL 758

Query: 336  FVEMLFWKTRKECHCINAEVLQGDLNRLKGEIRNFDGEVGQPNDRAGSTYKSMAESLGDD 157
            FV++LFWKTRKECHCI+A+ L  D+ +   +  N  GE+G      GS   ++A+SLGDD
Sbjct: 759  FVDVLFWKTRKECHCIDADALLSDITK---DATNKGGEIGSSKGWRGSI--NIADSLGDD 813

Query: 156  EADVFIQHN-FNDQRLGNSLDALWKDFPNSKRSVGSQSSPPSML---DGDSDKN 7
            E D+ I H  +N  +  +S     +D   SKRS+G+ +    +L   D ++D N
Sbjct: 814  EVDLVIPHEPYNADKDDDSSSGEHEDV--SKRSMGATNKSNRILSFSDSEADDN 865


>gb|AFW79243.1| putative timeless C-term domain and Homeodomain protein [Zea mays]
          Length = 1101

 Score =  157 bits (397), Expect = 8e-37
 Identities = 88/169 (52%), Positives = 114/169 (67%)
 Frame = -3

Query: 516  RFCDDLDLYPMLYQLSLMTTFHEILAEQKSSVSNEYKNIVDFLSKVSRRMLRTIKRQPLL 337
            RFC+DL+L PMLYQLSL+TTF++ILAEQK S S EY NIV+FLSKV R+MLRTIK+QPLL
Sbjct: 597  RFCEDLELSPMLYQLSLLTTFYDILAEQKLSSSKEYTNIVNFLSKVVRKMLRTIKKQPLL 656

Query: 336  FVEMLFWKTRKECHCINAEVLQGDLNRLKGEIRNFDGEVGQPNDRAGSTYKSMAESLGDD 157
            FV++LFWKTRKECHCI+A+ L   LN LK ++ + D E+G  + +      ++A+SLGDD
Sbjct: 657  FVDILFWKTRKECHCIDADAL---LNELKNDVGSKDSEIG--SSKGWRDRINIADSLGDD 711

Query: 156  EADVFIQHNFNDQRLGNSLDALWKDFPNSKRSVGSQSSPPSMLDGDSDK 10
            E DV I     D      L A        K S   + S  S+ D ++D+
Sbjct: 712  EVDVVIPQAPYDADKDGDLSAGEHTDDFRKSSTKYKRSRLSLSDSEADE 760


>ref|XP_003565892.1| PREDICTED: protein timeless homolog [Brachypodium distachyon]
          Length = 1121

 Score =  157 bits (396), Expect = 1e-36
 Identities = 83/138 (60%), Positives = 101/138 (73%)
 Frame = -3

Query: 516  RFCDDLDLYPMLYQLSLMTTFHEILAEQKSSVSNEYKNIVDFLSKVSRRMLRTIKRQPLL 337
            RFC+DL L PMLYQLSL+TTF++ILAEQK S S EY NIV+FLSK+ R+MLRT+K+QPLL
Sbjct: 698  RFCEDLQLSPMLYQLSLLTTFYDILAEQKLSSSKEYANIVNFLSKIVRKMLRTMKKQPLL 757

Query: 336  FVEMLFWKTRKECHCINAEVLQGDLNRLKGEIRNFDGEVGQPNDRAGSTYKSMAESLGDD 157
            FVE+LFWK+RKECHCI A+ L   LN LKG++ N   EVG      G    ++A+SLGDD
Sbjct: 758  FVEILFWKSRKECHCIGADAL---LNELKGDVNNKAAEVGSSKGWRGPI--NIADSLGDD 812

Query: 156  EADVFIQHNFNDQRLGNS 103
            EAD  I     D   G+S
Sbjct: 813  EADYVIPPEPYDAEDGDS 830


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