BLASTX nr result
ID: Dioscorea21_contig00009973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00009973
(1553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28799.3| unnamed protein product [Vitis vinifera] 468 e-165
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi... 467 e-158
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera] 467 e-155
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t... 431 e-148
tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea m... 474 e-131
>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 468 bits (1205), Expect(2) = e-165
Identities = 233/373 (62%), Positives = 284/373 (76%), Gaps = 1/373 (0%)
Frame = -3
Query: 1539 YLLQEVNINIDDMFRRYLQKHLDPSGCCPLSIYNCSLLSELNLRQPTSLFLKQNGGHSTA 1360
YL Q+ +DD+F LQKHL P G CPLS++N ++LS+ NL+ L KQNG ++
Sbjct: 430 YLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKLTNRLVSKQNGIKNSK 489
Query: 1359 PVGKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCFCDRRKLEWYLRRNLAKIVEDDPP 1180
VG+KASRELFV+KFSCKSPVYHNCRI+A+DGRLLC+CDRRKLEWY+RR LAK+V+D+P
Sbjct: 490 QVGQKASRELFVKKFSCKSPVYHNCRIFASDGRLLCYCDRRKLEWYVRRGLAKLVDDNPL 549
Query: 1179 AIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEKSHYLRYRIIPSCYRMHFPEHLKSHSS 1000
AIMLLFEPKGRPEDE NDFY+QSKKNICVGCGE++HYLRYRIIPSCYRMHFPEHLKSH S
Sbjct: 550 AIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRS 609
Query: 999 HDIVLLCVDCHEVAHSAAEKYKRKVAAEFGIPLFVQTIVESRENMI-DAAAKSEDTEKET 823
HDIVLLCVDCHEVAHSAAEKYK+K+AAEFGIPLFVQ +V+SRE + + SE E
Sbjct: 610 HDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEA 669
Query: 822 GVSPLQLRIAAMALLRHGSTMPLKRRDELTEIVKAYFGGRDIIQEDLERALLVGLSPHER 643
GVSPLQLR AAMALLRHG MP KR +EL + V Y+GGR+I +EDLE+ALLVG+SPHER
Sbjct: 670 GVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHER 729
Query: 642 RRLEKKRGLSFKHRDIDAVAKDNPYITSVTNQDNGKISNKLEVSRGSTTYESTEGQDASV 463
+RLE+K+G+S KH A + ++ + I N L+V G +T+G+
Sbjct: 730 KRLERKKGMSLKHSK-GAGFPNKEQESNARSMGTSPIDNALKVD-GEGGLNTTKGEACGK 787
Query: 462 DINAQLEEIFLQM 424
N EI +++
Sbjct: 788 QENGNDLEITMEV 800
Score = 141 bits (356), Expect(2) = e-165
Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
Frame = -2
Query: 430 TDDNEQNAD-GETSDQGRGCISTTDTVNEDPSEQA--DAICSSSSGQVVTSNRAKTVSLL 260
+D N ++D ETS+ C+ TD + D S+G + K +SLL
Sbjct: 803 SDSNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHNPK-LSLL 861
Query: 259 GHGPHGKEVVEYLLNNHGEEGIRNFCQKWRQVFVDATNPRFLPAGWDIMHSGRREFGDYS 80
GHGPHGKEVV++LL +GE+GIR FCQ+WRQ FV+A +PRFLPAGWD+MHSGRR+FG++S
Sbjct: 862 GHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFS 921
Query: 79 VYNPGKKALPP 47
VYNP KKA P
Sbjct: 922 VYNPDKKAFAP 932
>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
[Ricinus communis]
Length = 977
Score = 467 bits (1202), Expect(2) = e-158
Identities = 238/371 (64%), Positives = 283/371 (76%), Gaps = 3/371 (0%)
Frame = -3
Query: 1548 ELCYLLQEVNINIDDMFRRYLQKHLDPSGCCPLSIYNCSLLSELNLRQPTSLFLKQNGGH 1369
+ C L+QE N+DD+F LQK L P+G CPLS+YN +LL ++R K+NG
Sbjct: 434 DFCCLIQENKSNLDDIFSLLLQKCLGPNGSCPLSVYNYALLISCDVRLTNRSMSKKNGFK 493
Query: 1368 STAPVGKKASR--ELFVQKFSCKSPVYHNCRIYANDGRLLCFCDRRKLEWYLRRNLAKIV 1195
S+ V +KASR ELFVQKFSCKSPVYHNCRIYANDGRLLC+CDRRKLEWYL R LA +V
Sbjct: 494 SSKQVARKASRSRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLHRELAILV 553
Query: 1194 EDDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEKSHYLRYRIIPSCYRMHFPEHL 1015
+++PPAI LLFEPKGRPEDE NDFYIQSK+NICVGCGE SHYLRYRIIPSCYR+HFPEHL
Sbjct: 554 DENPPAIRLLFEPKGRPEDEDNDFYIQSKRNICVGCGEGSHYLRYRIIPSCYRIHFPEHL 613
Query: 1014 KSHSSHDIVLLCVDCHEVAHSAAEKYKRKVAAEFGIPLFVQTIVESREN-MIDAAAKSED 838
KSH SHDIVLLCVDCHEVAH+AAEKYKR VA EFGIPLFV+ +V+S+E+ +I ++ S
Sbjct: 614 KSHRSHDIVLLCVDCHEVAHAAAEKYKRHVAVEFGIPLFVRKVVDSKESAIISESSSSLM 673
Query: 837 TEKETGVSPLQLRIAAMALLRHGSTMPLKRRDELTEIVKAYFGGRDIIQEDLERALLVGL 658
T +E GVSPLQLR AAMALLRHG MP KRR+ELT+IV Y+GGR+I QEDLERALLVG+
Sbjct: 674 TAEEAGVSPLQLRTAAMALLRHGPRMPPKRREELTQIVTQYYGGREISQEDLERALLVGM 733
Query: 657 SPHERRRLEKKRGLSFKHRDIDAVAKDNPYITSVTNQDNGKISNKLEVSRGSTTYESTEG 478
SPHERRR EKKRGLS K R + + +N + VT + +N + T+
Sbjct: 734 SPHERRRFEKKRGLSLK-RSANNICSNNELVHDVTMVKSSVENNSI-----------TDT 781
Query: 477 QDASVDINAQL 445
D+S IN++L
Sbjct: 782 PDSSQTINSEL 792
Score = 121 bits (303), Expect(2) = e-158
Identities = 66/143 (46%), Positives = 86/143 (60%), Gaps = 26/143 (18%)
Frame = -2
Query: 406 DGETSDQGRGCISTT-DTVNEDPSEQADAICSS---SSGQVVTSNRAKTVSLLGHGPHGK 239
+ E SD C DT +P +CS+ G ++ N +K +SLLGHGPHGK
Sbjct: 833 ENEVSDGKEICAGNDGDTCEINPPN--GIVCSNYPTHGGHGLSKNNSK-LSLLGHGPHGK 889
Query: 238 EVVEYLLNNHGEEGIRNFCQKWRQVFVDATNPRFLPAGWDIMH----------------- 110
+VVE+LL +G++GIR FCQ+WRQVFV+A +PRFLPAGWD+MH
Sbjct: 890 QVVEHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDVMHRQCPEHNTQSTILDLIV 949
Query: 109 -----SGRREFGDYSVYNPGKKA 56
SGRREFG++SVYNP K+A
Sbjct: 950 SAVFASGRREFGEFSVYNPTKRA 972
>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
Length = 951
Score = 467 bits (1201), Expect(2) = e-155
Identities = 232/373 (62%), Positives = 284/373 (76%), Gaps = 1/373 (0%)
Frame = -3
Query: 1539 YLLQEVNINIDDMFRRYLQKHLDPSGCCPLSIYNCSLLSELNLRQPTSLFLKQNGGHSTA 1360
YL Q+ +DD+F LQKHL P G CPLS++N ++LS+ NL+ L KQNG ++
Sbjct: 401 YLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKLTNRLVSKQNGIKNSK 460
Query: 1359 PVGKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCFCDRRKLEWYLRRNLAKIVEDDPP 1180
VG+KASRELFV+KFSCKSPVYHNCRI+A+DG+LLC+CDRRKLEWY+RR LAK+V+D+P
Sbjct: 461 QVGQKASRELFVKKFSCKSPVYHNCRIFASDGQLLCYCDRRKLEWYVRRGLAKLVDDNPL 520
Query: 1179 AIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEKSHYLRYRIIPSCYRMHFPEHLKSHSS 1000
AIMLLFEPKGRPEDE NDFY+QSKKNICVGCGE++HYLRYRIIPSCYRMHFPEHLKSH S
Sbjct: 521 AIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRS 580
Query: 999 HDIVLLCVDCHEVAHSAAEKYKRKVAAEFGIPLFVQTIVESRENMI-DAAAKSEDTEKET 823
HDIVLLCVDCHEVAHSAAEKYK+K+AAEFGIPLFVQ +V+SRE + + SE E
Sbjct: 581 HDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEA 640
Query: 822 GVSPLQLRIAAMALLRHGSTMPLKRRDELTEIVKAYFGGRDIIQEDLERALLVGLSPHER 643
GVSPLQLR AAMALLRHG MP KR +EL + V Y+GGR+I +EDLE+ALLVG+SPHER
Sbjct: 641 GVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHER 700
Query: 642 RRLEKKRGLSFKHRDIDAVAKDNPYITSVTNQDNGKISNKLEVSRGSTTYESTEGQDASV 463
+RLE+K+G+S KH A + ++ + I N L+V G +T+G+
Sbjct: 701 KRLERKKGMSLKHSK-GAGFPNKEQESNARSMGTSPIDNALKVD-GEGGLNTTKGEACGK 758
Query: 462 DINAQLEEIFLQM 424
N EI +++
Sbjct: 759 QENGNDLEITMEV 771
Score = 108 bits (271), Expect(2) = e-155
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Frame = -2
Query: 430 TDDNEQNAD-GETSDQGRGCISTTDTVNEDPSEQA--DAICSSSSGQVVTSNRAKTVSLL 260
+D N ++D ETS+ C+ TD + D S G + K +SLL
Sbjct: 774 SDSNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSBGNASPKHNPK-LSLL 832
Query: 259 GHGPHGKEVVEYLLNNHGEEGIRNFCQKWRQVFVDATNPRFLPAGWDIMHSGRREFGDYS 80
GHGPHGKEVV++LL +GE+GIR FCQ+WRQ FV+A +PRFLPAGWD+MH RR + +
Sbjct: 833 GHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMH--RRHTRNSA 890
Query: 79 VYNPGK 62
+ GK
Sbjct: 891 HHRQGK 896
>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease
RRP6 [Medicago truncatula]
Length = 974
Score = 431 bits (1108), Expect(2) = e-148
Identities = 222/368 (60%), Positives = 271/368 (73%), Gaps = 5/368 (1%)
Frame = -3
Query: 1548 ELCYLLQEVNINIDDMFRRYLQKHLDPSGCCPLSIYNCSLLSELNLRQPTSLFLKQNGGH 1369
++C+LL +N D++ LQK L +G C L+I N +LL N+R PT L K++
Sbjct: 469 DICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISNYALLVNCNVR-PT-LSSKRSSLK 526
Query: 1368 STAPVGKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCFCDRRKLEWYLRRNLAKIVED 1189
+ KKASR LFV+KFSCKSPVYHNCRI+ANDGRLLC+CDR+KLEWYL R+LAK+V++
Sbjct: 527 NPRQHSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEWYLSRDLAKVVDE 586
Query: 1188 DPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEKSHYLRYRIIPSCYRMHFPEHLKS 1009
+PPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGE +HYLRYRIIPSCYR+HFPEHLKS
Sbjct: 587 EPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKS 646
Query: 1008 HSSHDIVLLCVDCHEVAHSAAEKYKRKVAAEFGIPLFVQTIVESRENMIDAAAKSEDTEK 829
H SHDIVLLCVDCHE AH+AAEKYKRKVA+EFGIPL+V+ ++ + ++E
Sbjct: 647 HRSHDIVLLCVDCHEAAHAAAEKYKRKVASEFGIPLYVRRVIHPGQ-------ETEKPND 699
Query: 828 ETGVSPLQLRIAAMALLRHGSTMPLKRRDELTEIVKAYFGGRDIIQEDLERALLVGLSPH 649
E GVSPLQLR AA+ALLRHG MP RR+ELTEI+K Y+GGR+I +EDLE+AL VG++PH
Sbjct: 700 EGGVSPLQLRSAAVALLRHGPRMPHDRREELTEIIKTYYGGREISKEDLEKALQVGMTPH 759
Query: 648 ERRRLEKKRGLSFKHRDIDAVA-----KDNPYITSVTNQDNGKISNKLEVSRGSTTYEST 484
ERR+ EKKRG+S KH A A D Y ++N D + K++ GS E T
Sbjct: 760 ERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAPGMSNGD----TLKVDTLDGSYVNEET 815
Query: 483 EGQDASVD 460
D D
Sbjct: 816 RSGDNRQD 823
Score = 122 bits (307), Expect(2) = e-148
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Frame = -2
Query: 415 QNADGETSDQGRGCISTTDTVNE-DPSEQADAICSSSSGQVVTSNRAKTVSLLGHGPHGK 239
+ D + + + T +++N+ P+ +D + +K +SLLGHGPHGK
Sbjct: 849 KTTDHDDDETSYSLVDTDESLNKMQPNVVSDEESIKDEDTTQAKHHSK-LSLLGHGPHGK 907
Query: 238 EVVEYLLNNHGEEGIRNFCQKWRQVFVDATNPRFLPAGWDIMHSGRREFGDYSVYNPGKK 59
+VV++LL +GE+GIR FCQ+WRQVFVDA PRFLP GWD+ HSGRR+FG++SVYN K+
Sbjct: 908 QVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKHSGRRDFGEFSVYNHQKR 967
>tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 474 bits (1219), Expect = e-131
Identities = 225/338 (66%), Positives = 279/338 (82%), Gaps = 1/338 (0%)
Frame = -3
Query: 1548 ELCYLLQEVNINIDDMFRRYLQKHLDPSGCCPLSIYNCSLLSELNLRQPTSLFLKQNGGH 1369
ELCYLL ++ ++D +F+ L+K+ DPSG C LS+YN +L++ L+L+Q + + +G
Sbjct: 444 ELCYLLDDITTSMDSIFKSLLEKYKDPSGLCRLSVYNYNLITHLSLKQTSMFSVAPSGKK 503
Query: 1368 STAPVGKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCFCDRRKLEWYLRRNLAKIVED 1189
TA KK SR+LF++KFSCKSPVYHNCRIYA+DGRLLC+CDR+KLEWY++RNLAK++E+
Sbjct: 504 LTALPNKKVSRDLFIKKFSCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIEN 563
Query: 1188 DPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEKSHYLRYRIIPSCYRMHFPEHLKS 1009
PPAIMLLFEPKGRPEDE N+FYIQSKKNICVGCGEKSHY+RYRIIPSCYRMHFPEHLKS
Sbjct: 564 SPPAIMLLFEPKGRPEDEDNEFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKS 623
Query: 1008 HSSHDIVLLCVDCHEVAHSAAEKYKRKVAAEFGIPLFVQTIVESRE-NMIDAAAKSEDTE 832
H SHDIVLLCVDCHE+AHSAAEKYKR++A EFGIPLFVQ I+ S + ++I + SED
Sbjct: 624 HRSHDIVLLCVDCHEIAHSAAEKYKRRIAEEFGIPLFVQKIMNSGDISLITNTSVSEDKL 683
Query: 831 KETGVSPLQLRIAAMALLRHGSTMPLKRRDELTEIVKAYFGGRDIIQEDLERALLVGLSP 652
TGVSPLQLR AAMALLRHGSTMPLKR +EL +IVK+Y+GGRD+ EDLE ALLVG+SP
Sbjct: 684 NGTGVSPLQLRTAAMALLRHGSTMPLKRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSP 743
Query: 651 HERRRLEKKRGLSFKHRDIDAVAKDNPYITSVTNQDNG 538
HERRRLEKK+G SF+ + + K + ++ ++D+G
Sbjct: 744 HERRRLEKKKGYSFRAQAQTIIRKSS---SNTISEDSG 778
Score = 126 bits (316), Expect = 2e-26
Identities = 63/124 (50%), Positives = 88/124 (70%)
Frame = -2
Query: 430 TDDNEQNADGETSDQGRGCISTTDTVNEDPSEQADAICSSSSGQVVTSNRAKTVSLLGHG 251
+D + + +T Q RG + T + D EQ+ IC +SS QV++ N A+ +SLLGHG
Sbjct: 834 SDHDTVTLETDTEQQARG--ACTPGNSHDDKEQS--ICDNSS-QVISKN-AEKISLLGHG 887
Query: 250 PHGKEVVEYLLNNHGEEGIRNFCQKWRQVFVDATNPRFLPAGWDIMHSGRREFGDYSVYN 71
HGK+VVE L +N GEE + FCQ+WRQ+FV+A +PR+LP+GW+I HSGRR+FGD+SVY
Sbjct: 888 HHGKQVVELLFSNGGEEFVNQFCQRWRQIFVEAVHPRYLPSGWNINHSGRRDFGDFSVYK 947
Query: 70 PGKK 59
P +K
Sbjct: 948 PPRK 951