BLASTX nr result

ID: Dioscorea21_contig00009936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009936
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|2...   468   e-129
ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|NP_001066281.2| Os12g0172500 [Oryza sativa Japonica Group] g...   459   e-127
ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-l...   458   e-126
ref|XP_002285063.1| PREDICTED: WD repeat-containing protein 20 [...   458   e-126

>ref|XP_002322873.1| predicted protein [Populus trichocarpa] gi|222867503|gb|EEF04634.1|
            predicted protein [Populus trichocarpa]
          Length = 560

 Score =  468 bits (1203), Expect = e-129
 Identities = 228/304 (75%), Positives = 253/304 (83%), Gaps = 1/304 (0%)
 Frame = -1

Query: 1325 HADGNLYVYDKSKDGATDCSFPVVKDQTQFTVSHARSSRSNPIARWHICQGSINSISFST 1146
            HADGNLYVY+KSKDGA D SFPV+KDQTQF+VSHAR S+SNPIARWHICQGSIN I+FS 
Sbjct: 261  HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARYSKSNPIARWHICQGSINGIAFSN 320

Query: 1145 DGTHLATVGRDGYLRVFDYSKELLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQVWS 966
            +G +LATVGRDGYLRVFDYSKE LICGGKSYYGALLCCAWS D KYILTGGEDDLVQVWS
Sbjct: 321  EGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDAKYILTGGEDDLVQVWS 380

Query: 965  MEDWKIVAWGEGHNSWVSGVAFDSYWSVPNSDGTGENVMYRFGSVGQDTQLLLWDLVMDE 786
            MED K+VAWGEGHNSWVSGVAFDSYWS PNSDGTGENV+YRFGSVGQDTQLLLWDL MDE
Sbjct: 381  MEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSDGTGENVVYRFGSVGQDTQLLLWDLEMDE 440

Query: 785  IVVPL-RCYXXXXXXXXXXXXXSAHWDNIIPIGTLQPAPSMRDVPKLSPVVAHRAHVEPL 609
            IVVPL RC              S+HWD++IP+GTLQPAPSMRDVPKLSPVVAHR H EPL
Sbjct: 441  IVVPLRRCPPPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDVPKLSPVVAHRVHTEPL 500

Query: 608  AGLIFTQDSVLTICREGHIKIWVRPIQGDSSSQSNASDTAHGSDGSIDKLVTTSARSIGS 429
            +GL+FTQ+ VLT+CREGH+KIW+RP  G   SQS  S+T   +  S+ +    S++   S
Sbjct: 501  SGLVFTQECVLTVCREGHVKIWMRP--GALDSQSGNSETIPST--SLKEKPLLSSKIGSS 556

Query: 428  NYKQ 417
             YKQ
Sbjct: 557  TYKQ 560


>ref|XP_002326176.1| predicted protein [Populus trichocarpa] gi|222833369|gb|EEE71846.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  465 bits (1197), Expect = e-128
 Identities = 227/303 (74%), Positives = 254/303 (83%)
 Frame = -1

Query: 1325 HADGNLYVYDKSKDGATDCSFPVVKDQTQFTVSHARSSRSNPIARWHICQGSINSISFST 1146
            HADGNLYVY+KSKDGA D SFPV+KDQTQF+VSHAR S+SNPIARWH+ QGSIN I+FST
Sbjct: 250  HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARYSKSNPIARWHVSQGSINGIAFST 309

Query: 1145 DGTHLATVGRDGYLRVFDYSKELLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQVWS 966
            DGT+LATVGRDGYLRVFDY KE LICGGKSYYGALLCCAWS D KYILTGGEDDLVQVWS
Sbjct: 310  DGTYLATVGRDGYLRVFDYLKEQLICGGKSYYGALLCCAWSMDVKYILTGGEDDLVQVWS 369

Query: 965  MEDWKIVAWGEGHNSWVSGVAFDSYWSVPNSDGTGENVMYRFGSVGQDTQLLLWDLVMDE 786
            MED K+VAWGEGH+SWVSGVAFDSYWS PNSDGTGENV+YRFGSVGQDTQLLLWDL MDE
Sbjct: 370  MEDRKVVAWGEGHSSWVSGVAFDSYWSSPNSDGTGENVVYRFGSVGQDTQLLLWDLEMDE 429

Query: 785  IVVPLRCYXXXXXXXXXXXXXSAHWDNIIPIGTLQPAPSMRDVPKLSPVVAHRAHVEPLA 606
            IVVPLR               S+HWD++IP+GTLQPAPSMRDVPKLSPV+AHR H EPL+
Sbjct: 430  IVVPLRRCPPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDVPKLSPVLAHRVHTEPLS 489

Query: 605  GLIFTQDSVLTICREGHIKIWVRPIQGDSSSQSNASDTAHGSDGSIDKLVTTSARSIGSN 426
            GL+F Q+SVLT+CREGHIKIW+RP  G S SQS  S+T   +  S+ +    S+++  S 
Sbjct: 490  GLVFRQESVLTVCREGHIKIWMRP--GTSESQSGNSETILST--SLKEKPLLSSKTGSSA 545

Query: 425  YKQ 417
            YKQ
Sbjct: 546  YKQ 548


>ref|NP_001066281.2| Os12g0172500 [Oryza sativa Japonica Group]
            gi|108862254|gb|ABA96577.2| transducin family protein,
            putative, expressed [Oryza sativa Japonica Group]
            gi|108862255|gb|ABG21898.1| transducin family protein,
            putative, expressed [Oryza sativa Japonica Group]
            gi|218186511|gb|EEC68938.1| hypothetical protein
            OsI_37639 [Oryza sativa Indica Group]
            gi|222616713|gb|EEE52845.1| hypothetical protein
            OsJ_35382 [Oryza sativa Japonica Group]
            gi|255670091|dbj|BAF29300.2| Os12g0172500 [Oryza sativa
            Japonica Group]
          Length = 563

 Score =  459 bits (1180), Expect = e-127
 Identities = 215/309 (69%), Positives = 255/309 (82%), Gaps = 1/309 (0%)
 Frame = -1

Query: 1325 HADGNLYVYDKSKDGATDCSFPVVKDQTQFTVSHARSSRSNPIARWHICQGSINSISFST 1146
            H+DGNLYVYDK KDG T+C+FP +KD  Q  +SHA+SS+SNPIARWH+CQGSIN+ISFS 
Sbjct: 254  HSDGNLYVYDKCKDGNTECTFPAIKDPAQLMISHAKSSKSNPIARWHVCQGSINAISFSP 313

Query: 1145 DGTHLATVGRDGYLRVFDYSKELLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQVWS 966
            DG +LATVGRDGYLRVFD+SKE LI GGKSYYGALLCC WS DGKY+LTGGEDDLVQVWS
Sbjct: 314  DGAYLATVGRDGYLRVFDFSKEQLIFGGKSYYGALLCCTWSSDGKYLLTGGEDDLVQVWS 373

Query: 965  MEDWKIVAWGEGHNSWVSGVAFDSYWSVPNSDGTGENVMYRFGSVGQDTQLLLWDLVMDE 786
            M+D KIVAWGEGHNSWVSGV+FDSYWS PNSDGTGEN +YRFGSVGQDTQLLLWDL +DE
Sbjct: 374  MDDRKIVAWGEGHNSWVSGVSFDSYWSPPNSDGTGENTVYRFGSVGQDTQLLLWDLALDE 433

Query: 785  IVVPLRCYXXXXXXXXXXXXXSAHWDN-IIPIGTLQPAPSMRDVPKLSPVVAHRAHVEPL 609
            I VPLR +             SAHWDN  +P G LQP+P MRDVPKLSP+VAHR HV+PL
Sbjct: 434  IAVPLR-HPSSGSPTFSSGSPSAHWDNACLPTGVLQPSPRMRDVPKLSPLVAHRVHVDPL 492

Query: 608  AGLIFTQDSVLTICREGHIKIWVRPIQGDSSSQSNASDTAHGSDGSIDKLVTTSARSIGS 429
            +GL+FT +S+LTICREG IKIWVRP Q +++ QSN+S+   G+  S D+++TTS ++ GS
Sbjct: 493  SGLVFTNESILTICREGLIKIWVRPDQNENNHQSNSSELVLGNPVSKDRVITTSNKATGS 552

Query: 428  NYKQPPPIL 402
            ++KQ   ++
Sbjct: 553  SFKQSSAVV 561


>ref|XP_003554372.1| PREDICTED: WD repeat-containing protein 20-like [Glycine max]
          Length = 550

 Score =  458 bits (1178), Expect = e-126
 Identities = 226/303 (74%), Positives = 251/303 (82%)
 Frame = -1

Query: 1325 HADGNLYVYDKSKDGATDCSFPVVKDQTQFTVSHARSSRSNPIARWHICQGSINSISFST 1146
            HADGNLYVY+K+KDGA D SFPVVKDQTQF+V+HAR S+SNPIARWHICQGSINSISFS 
Sbjct: 252  HADGNLYVYEKNKDGAGDSSFPVVKDQTQFSVAHARYSKSNPIARWHICQGSINSISFSM 311

Query: 1145 DGTHLATVGRDGYLRVFDYSKELLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQVWS 966
            DG  LATVGRDGYLRVFDYSKE LICGGKSYYGALLCCAWS DGKYILTGGEDDLVQVWS
Sbjct: 312  DGAFLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWS 371

Query: 965  MEDWKIVAWGEGHNSWVSGVAFDSYWSVPNSDGTGENVMYRFGSVGQDTQLLLWDLVMDE 786
            MED K+VAWGEGHNSWVSGVAFDSYWS PNS+  GE +MYRFGSVGQDTQLLLWDL MDE
Sbjct: 372  MEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETIMYRFGSVGQDTQLLLWDLEMDE 431

Query: 785  IVVPLRCYXXXXXXXXXXXXXSAHWDNIIPIGTLQPAPSMRDVPKLSPVVAHRAHVEPLA 606
            IVVPLR               S+HWDN++P+GTLQPAPSM DVPK+SP+VAHR H EPL+
Sbjct: 432  IVVPLR-RPPGGSPTYSTGSQSSHWDNVVPLGTLQPAPSMLDVPKISPLVAHRVHTEPLS 490

Query: 605  GLIFTQDSVLTICREGHIKIWVRPIQGDSSSQSNASDTAHGSDGSIDKLVTTSARSIGSN 426
            GLIFTQ+SVLT CREGHIKIW+RP  G + SQS+ S+    ++   +K   +S  S  S+
Sbjct: 491  GLIFTQESVLTACREGHIKIWMRP--GVAESQSSTSENLLATNLK-EKPSLSSKISSNSS 547

Query: 425  YKQ 417
            YKQ
Sbjct: 548  YKQ 550


>ref|XP_002285063.1| PREDICTED: WD repeat-containing protein 20 [Vitis vinifera]
            gi|297746239|emb|CBI16295.3| unnamed protein product
            [Vitis vinifera]
          Length = 548

 Score =  458 bits (1178), Expect = e-126
 Identities = 214/269 (79%), Positives = 238/269 (88%)
 Frame = -1

Query: 1325 HADGNLYVYDKSKDGATDCSFPVVKDQTQFTVSHARSSRSNPIARWHICQGSINSISFST 1146
            H+DGNLYVY+K KDG  D SFPV+KDQTQFTV+HARSS+SNP+ARWHICQGSINSI+FS+
Sbjct: 251  HSDGNLYVYEKGKDGTGDSSFPVIKDQTQFTVAHARSSKSNPVARWHICQGSINSIAFSS 310

Query: 1145 DGTHLATVGRDGYLRVFDYSKELLICGGKSYYGALLCCAWSPDGKYILTGGEDDLVQVWS 966
            DGT+LATVGRDGYLRVFDYSKE LICGGKSYYGALLCCAWS DGKYILTGGEDDLVQVWS
Sbjct: 311  DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSLDGKYILTGGEDDLVQVWS 370

Query: 965  MEDWKIVAWGEGHNSWVSGVAFDSYWSVPNSDGTGENVMYRFGSVGQDTQLLLWDLVMDE 786
            MED K+VAWGEGH+SWVSGVAFDSYWS P+SDGTGE+VMYRFGSVGQDTQLLLWDL M+E
Sbjct: 371  MEDRKVVAWGEGHSSWVSGVAFDSYWSSPSSDGTGESVMYRFGSVGQDTQLLLWDLSMEE 430

Query: 785  IVVPLRCYXXXXXXXXXXXXXSAHWDNIIPIGTLQPAPSMRDVPKLSPVVAHRAHVEPLA 606
            IVVPLR               S+HWD+I P+GTLQPAPSM+DVPKLSPVVAHR H EPL+
Sbjct: 431  IVVPLRRCPPGGSPTFSSGSQSSHWDSISPVGTLQPAPSMQDVPKLSPVVAHRVHSEPLS 490

Query: 605  GLIFTQDSVLTICREGHIKIWVRPIQGDS 519
            GLIFTQ+S+LT CREGH+KIW+RP   +S
Sbjct: 491  GLIFTQESILTACREGHVKIWMRPRSSES 519


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