BLASTX nr result

ID: Dioscorea21_contig00009917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009917
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]   138   2e-30
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   136   1e-29
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   135   2e-29
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   135   2e-29

>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score =  149 bits (376), Expect = 1e-33
 Identities = 88/181 (48%), Positives = 108/181 (59%), Gaps = 5/181 (2%)
 Frame = -3

Query: 1197 PESELDPDTRRRLLILQHGQDTRDXXXXXXXXXXXXPFQVSGPSVQSRGSSFPLDEEISP 1018
            PESELDPDTRRRLLILQHG D+RD              QVS P VQS GS  P++EE+SP
Sbjct: 561  PESELDPDTRRRLLILQHGHDSRDNAPSESPFPARPSTQVSAPRVQSVGSWVPVEEEMSP 620

Query: 1017 RLHRRLPNEFSIEPDSQRFSRKR-FRPSFYHGPDY---SDRAIHETHRPPLQVHRNDDRL 850
            R   R P EF ++ D     + R   PSF+H  +    SDR IHE  R P +    DDR+
Sbjct: 621  RQLNRTPREFPLDSDPMNIEKHRTHHPSFFHKVESNIPSDRMIHENQRQPKEATYRDDRM 680

Query: 849  RLNHAVSNYNAFLGEEMPIVR-NHYRDAHLGPASASVPYPENPVSVLQEIAVKCGAKVEY 673
            +LNH+ SNY +F G E P+ R +  RD  L  +  +    E PV VLQEIA+KCG KVE+
Sbjct: 681  KLNHSTSNYPSFQG-ECPLSRSSSNRDLDL-ESERAFSSTETPVEVLQEIAMKCGTKVEF 738

Query: 672  R 670
            R
Sbjct: 739  R 739



 Score =  100 bits (248), Expect = 1e-18
 Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
 Frame = -2

Query: 517  GEKLGEGIGRTRREXXXXXXXXXXXXXANNYLSSLPDAISQHADLN--KFPPFKENGFLH 344
            GEK+GEG G+TRRE                 +  L   IS H D++   +P   +NGFL 
Sbjct: 758  GEKVGEGTGKTRREAQRQAA--------EGSIKKLAGKISYH-DISYYSYPSANDNGFLG 808

Query: 343  DPNSVGHQVFAWDNYLSVTSTTDDHRFLDQKVMEGRIATASIAALKELCTMKGFNLVFHX 164
            D NS G+Q    D  ++ ++T++  R LDQ++   + +  S+ ALKE C  +G  + F  
Sbjct: 809  DMNSFGNQPLLKDENITYSATSEPSRLLDQRLEGSKKSMGSVTALKEFCMTEGLGVNFLA 868

Query: 163  XXXXXXXXXSQGEMHAQVEVAGQILGMGSGITWXXXXXXXXXXALGTLKSMLGQ 2
                        E+HAQVE+ GQ+LG G G+TW          ALG+L++M GQ
Sbjct: 869  QTPLSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQ 922


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score =  138 bits (348), Expect = 2e-30
 Identities = 79/163 (48%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
 Frame = -3

Query: 1197 PESELDPDTRRRLLILQHGQDTRDXXXXXXXXXXXXPFQVSGPSVQSRGSSFPLDEEISP 1018
            PESELDPDTRRRLLILQHGQDTR+            P QVS P VQSRGS FP DEE+SP
Sbjct: 511  PESELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSP 570

Query: 1017 R-LHRRLPNEFSIEPDSQRFSRKR-FRPSFYHGPD---YSDRAIHETHRPPLQVHRNDDR 853
            R L+R +P EF ++ D+    + R   PSF+H  +    SDR +HE  R   +V   DDR
Sbjct: 571  RQLNRAVPKEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHENQRLSKEVLHRDDR 630

Query: 852  LRLNHAVSNYNAFLGEEMPIVRNHYRDAHLGPASASVPYPENP 724
            LRLNH++  Y++F GEE+P+ R+         +    PY E P
Sbjct: 631  LRLNHSLPGYHSFSGEEVPLGRSSSNRDLDFESGRGAPYAETP 673



 Score =  112 bits (280), Expect = 2e-22
 Identities = 64/172 (37%), Positives = 91/172 (52%)
 Frame = -2

Query: 517  GEKLGEGIGRTRREXXXXXXXXXXXXXANNYLSSLPDAISQHADLNKFPPFKENGFLHDP 338
            GEK+GEG G+TRRE             +  YL         H D+N+FP   +N F+ D 
Sbjct: 688  GEKIGEGTGKTRREAQCQAAEASLMYLSYRYL---------HGDVNRFPNASDNNFMSDT 738

Query: 337  NSVGHQVFAWDNYLSVTSTTDDHRFLDQKVMEGRIATASIAALKELCTMKGFNLVFHXXX 158
            NS G+Q F  +  +S ++ ++  R LD ++   + +  SI+ALKELC M+G  + F    
Sbjct: 739  NSFGYQSFPKEGSMSFSTASESSRLLDPRLESSKKSMGSISALKELCMMEGLGVEFLSQP 798

Query: 157  XXXXXXXSQGEMHAQVEVAGQILGMGSGITWXXXXXXXXXXALGTLKSMLGQ 2
                    + E+ AQVE+ GQ+LG G+G TW          ALG+LKSMLGQ
Sbjct: 799  PLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKSMLGQ 850


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  136 bits (342), Expect = 1e-29
 Identities = 84/183 (45%), Positives = 112/183 (61%), Gaps = 8/183 (4%)
 Frame = -3

Query: 1197 PESELDPDTRRRLLILQHGQDTRDXXXXXXXXXXXXPFQVSGPSV-QSRGSSFPLDEEI- 1024
            PESELDPDTRRRLLILQHGQDTRD            P Q S P V  SRG  FP +EEI 
Sbjct: 535  PESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPAEEEIG 594

Query: 1023 SPRLHRRLPNEFSIEPDSQRFSRKR-FRPSFYHGPD---YSDRAIHETH-RPPLQVHRND 859
            S  L+R +P EF ++      ++ R   PSF+   +    SDR +H++H R P +++  D
Sbjct: 595  SQPLNRVVPKEFPVDSGPLGIAKPRPHHPSFFSKVESSISSDRILHDSHQRLPKEMYHRD 654

Query: 858  DRLRLNHAVSNYNAFLGEEMPIVRNHYRDAHLGPASA-SVPYPENPVSVLQEIAVKCGAK 682
            DR RLNH +S+Y +F G+++P  R+      L   S  SV + + PV+VLQEIA+KCG K
Sbjct: 655  DRPRLNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQEIALKCGTK 714

Query: 681  VEY 673
            V++
Sbjct: 715  VDF 717



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
 Frame = -2

Query: 517  GEKLGEGIGRTRREXXXXXXXXXXXXXANNYLSSLPDAI-SQHADLNKFPPFKENGFLHD 341
            G+K+G  +GRTR+E             A+ YLSS  D   S + D++ FP   ++G++  
Sbjct: 737  GKKIGHRVGRTRKEAQNKAAEDSIKHLADIYLSSAKDEPGSTYGDVSGFPNVNDSGYMGI 796

Query: 340  PNSVGHQVFAWDNYLSVTSTTDDHRFLDQKVMEGRIATASIAALKELCTMKGFNLVFHXX 161
             +S+G+Q  + ++  S  ST    R LD ++   + +  SI++LKELC M+G ++ F   
Sbjct: 797  ASSLGNQPLSKEDSASF-STASPSRVLDPRLDVSKRSMGSISSLKELCMMEGLDVNFLSA 855

Query: 160  XXXXXXXXSQ-GEMHAQVEVAGQILGMGSGITWXXXXXXXXXXALGTLKSMLGQ 2
                     Q  E+HAQVE+ G++ G G G+TW          ALG+L+S LGQ
Sbjct: 856  PAPVSTNSVQKDEVHAQVEIDGKVFGKGIGLTWDEAKMQAAEKALGSLRSKLGQ 909


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
            [Vitis vinifera]
          Length = 860

 Score =  135 bits (341), Expect = 2e-29
 Identities = 75/143 (52%), Positives = 94/143 (65%), Gaps = 5/143 (3%)
 Frame = -3

Query: 1197 PESELDPDTRRRLLILQHGQDTRDXXXXXXXXXXXXPFQVSGPSVQSRGSSFPLDEEISP 1018
            PESELDPDTRRRLLILQHGQDTR+            P QVS P VQSRGS FP DEE+SP
Sbjct: 530  PESELDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSP 589

Query: 1017 R-LHRRLPNEFSIEPDSQRFSRKR-FRPSFYHGPD---YSDRAIHETHRPPLQVHRNDDR 853
            R L+R +P EF ++ D+    + R   PSF+H  +    SDR +HE  R   +V   DDR
Sbjct: 590  RQLNRAVPKEFPLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHENQRLSKEVLHRDDR 649

Query: 852  LRLNHAVSNYNAFLGEEMPIVRN 784
            LRLNH++  Y++F GEE+P+ R+
Sbjct: 650  LRLNHSLPGYHSFSGEEVPLGRS 672



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 51/131 (38%), Positives = 75/131 (57%)
 Frame = -2

Query: 394  HADLNKFPPFKENGFLHDPNSVGHQVFAWDNYLSVTSTTDDHRFLDQKVMEGRIATASIA 215
            H D+N+FP   +N F+ D NS G+Q F  +  +S ++ ++  R LD ++   + +  SI+
Sbjct: 686  HGDVNRFPNASDNNFMSDTNSFGYQSFPKEGSMSFSTASESSRLLDPRLESSKKSMGSIS 745

Query: 214  ALKELCTMKGFNLVFHXXXXXXXXXXSQGEMHAQVEVAGQILGMGSGITWXXXXXXXXXX 35
            ALKELC M+G  + F            + E+ AQVE+ GQ+LG G+G TW          
Sbjct: 746  ALKELCMMEGLGVEFLSQPPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEK 805

Query: 34   ALGTLKSMLGQ 2
            ALG+LKSMLGQ
Sbjct: 806  ALGSLKSMLGQ 816


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  135 bits (341), Expect = 2e-29
 Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 8/183 (4%)
 Frame = -3

Query: 1197 PESELDPDTRRRLLILQHGQDTRDXXXXXXXXXXXXPFQVSGPSV-QSRGSSFPLDEEI- 1024
            PESELDPDTRRRLLILQHGQDTRD            P Q S P V  SRG  FP++EEI 
Sbjct: 541  PESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQASAPRVPSSRGVWFPVEEEIG 600

Query: 1023 SPRLHRRLPNEFSIEPDSQRFSRKRF-RPSFYHGPD---YSDRAIHETH-RPPLQVHRND 859
            S  L+R +P EF ++       + R   PSF++  +    SDR +H++H R P +++  D
Sbjct: 601  SQPLNRVVPKEFPVDSGPLGIEKPRLHHPSFFNKVESSISSDRILHDSHQRLPKEMYHRD 660

Query: 858  DRLRLNHAVSNYNAFLGEEMPIVRNHYRDAHLGPASA-SVPYPENPVSVLQEIAVKCGAK 682
            DR RLNH +S+Y +F G+++P  R+      L   S  SV + + PV+VL EIA+KCG K
Sbjct: 661  DRPRLNHMLSSYRSFSGDDIPFSRSSSSHRDLDSESGHSVLHADTPVAVLHEIALKCGTK 720

Query: 681  VEY 673
            V++
Sbjct: 721  VDF 723



 Score = 93.6 bits (231), Expect = 9e-17
 Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
 Frame = -2

Query: 517  GEKLGEGIGRTRREXXXXXXXXXXXXXANNYLSSLPDAI-SQHADLNKFPPFKENGFLHD 341
            G+K+G G GRTR+E             A+ YLSS  D   S + D++ FP   +NG++  
Sbjct: 743  GKKIGHGFGRTRKEAQNKAAKDSIEHLADIYLSSAKDEPGSTYGDVSGFPNVNDNGYMGI 802

Query: 340  PNSVGHQVFAWDNYLSVTSTTDDHRFLDQKVMEGRIATASIAALKELCTMKGFNLVFHXX 161
             +S+G+Q  + ++  S +S +   R LD ++   + +  SI+ALKELC M+G  + F   
Sbjct: 803  ASSLGNQPLSKEDSASFSSASPS-RALDPRLDVSKRSMGSISALKELCMMEGLGVNFLST 861

Query: 160  XXXXXXXXSQ-GEMHAQVEVAGQILGMGSGITWXXXXXXXXXXALGTLKSMLGQ 2
                     Q  E+HAQVE+ G+I G G G+TW          ALG L+S LGQ
Sbjct: 862  PAPVSTNSVQKDEVHAQVEIDGKIFGKGIGLTWDEAKMQAAEKALGNLRSKLGQ 915


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