BLASTX nr result

ID: Dioscorea21_contig00009897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009897
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein lig...   150   1e-34
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   146   2e-33
ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group] g...   146   2e-33
dbj|BAC79950.1| auxin-regulated protein-like protein [Oryza sati...   146   2e-33
gb|EAZ39648.1| hypothetical protein OsJ_24077 [Oryza sativa Japo...   146   2e-33

>ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS34-like
           [Brachypodium distachyon]
          Length = 515

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/112 (62%), Positives = 84/112 (75%), Gaps = 6/112 (5%)
 Frame = +1

Query: 1   PSAPPVPDDEFYNGPIQYPSIDSTPVNLTVPPLD----IQSGKQGAKXXXXXXXXXXX-- 162
           P+APP+ +  FYNGPIQYPSID TPV++T+P  +    + S K G               
Sbjct: 404 PTAPPLAEGTFYNGPIQYPSIDFTPVDVTMPTAEGAVVVNSSKPGENDADTSSGNTPSGT 463

Query: 163 CVICLDAPVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVIRLYAV 318
           CVICLDAPVEGACIPCGHMAGCMSCLK+I++KKWGCP+CRAKI+Q+IRLYAV
Sbjct: 464 CVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 515


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  146 bits (369), Expect = 2e-33
 Identities = 67/105 (63%), Positives = 79/105 (75%)
 Frame = +1

Query: 4   SAPPVPDDEFYNGPIQYPSIDSTPVNLTVPPLDIQSGKQGAKXXXXXXXXXXXCVICLDA 183
           SAPP+ D+   +GP+QYPSIDS+PV+LT P  +  +    A            CVICLDA
Sbjct: 399 SAPPIADEVVDDGPVQYPSIDSSPVDLTSPAFETSAA---ASEQSKEGGAASSCVICLDA 455

Query: 184 PVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVIRLYAV 318
           P+EGACIPCGHMAGCMSCL EIKAKKWGCPVCRAKIDQV++LY+V
Sbjct: 456 PIEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group]
           gi|75327171|sp|Q7XI08.1|XB34_ORYSJ RecName:
           Full=Probable E3 ubiquitin-protein ligase XBOS34;
           AltName: Full=Ankyrin repeat domain and RING
           finger-containing protein XBOS34; AltName: Full=XB3
           protein homolog 4 gi|33146928|dbj|BAC79949.1|
           auxin-regulated protein-like protein [Oryza sativa
           Japonica Group] gi|113611071|dbj|BAF21449.1|
           Os07g0446100 [Oryza sativa Japonica Group]
          Length = 513

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/122 (58%), Positives = 84/122 (68%), Gaps = 16/122 (13%)
 Frame = +1

Query: 1   PSAPPVPDDEFYNGPIQYPSIDSTPVNLTVPPLD----IQSGKQG------------AKX 132
           P+APP+    FY+GPIQYPSIDSTPV++T+P  D    + S K              A  
Sbjct: 392 PTAPPLAVGTFYDGPIQYPSIDSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESDANA 451

Query: 133 XXXXXXXXXXCVICLDAPVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVIRLY 312
                     CVICLDAPVEGACIPCGHMAGCMSCLK+I++KKWGCP+CRAKI+Q+IRLY
Sbjct: 452 SNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLY 511

Query: 313 AV 318
           AV
Sbjct: 512 AV 513


>dbj|BAC79950.1| auxin-regulated protein-like protein [Oryza sativa Japonica Group]
          Length = 260

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/122 (58%), Positives = 84/122 (68%), Gaps = 16/122 (13%)
 Frame = +1

Query: 1   PSAPPVPDDEFYNGPIQYPSIDSTPVNLTVPPLD----IQSGKQG------------AKX 132
           P+APP+    FY+GPIQYPSIDSTPV++T+P  D    + S K              A  
Sbjct: 139 PTAPPLAVGTFYDGPIQYPSIDSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESDANA 198

Query: 133 XXXXXXXXXXCVICLDAPVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVIRLY 312
                     CVICLDAPVEGACIPCGHMAGCMSCLK+I++KKWGCP+CRAKI+Q+IRLY
Sbjct: 199 SNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLY 258

Query: 313 AV 318
           AV
Sbjct: 259 AV 260


>gb|EAZ39648.1| hypothetical protein OsJ_24077 [Oryza sativa Japonica Group]
          Length = 493

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/122 (58%), Positives = 84/122 (68%), Gaps = 16/122 (13%)
 Frame = +1

Query: 1   PSAPPVPDDEFYNGPIQYPSIDSTPVNLTVPPLD----IQSGKQG------------AKX 132
           P+APP+    FY+GPIQYPSIDSTPV++T+P  D    + S K              A  
Sbjct: 372 PTAPPLAVGTFYDGPIQYPSIDSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESDANA 431

Query: 133 XXXXXXXXXXCVICLDAPVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVIRLY 312
                     CVICLDAPVEGACIPCGHMAGCMSCLK+I++KKWGCP+CRAKI+Q+IRLY
Sbjct: 432 SNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLY 491

Query: 313 AV 318
           AV
Sbjct: 492 AV 493


Top