BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009894
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   423   e-116
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-112
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-110
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   302   1e-79
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   293   8e-77

>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  423 bits (1088), Expect = e-116
 Identities = 206/402 (51%), Positives = 281/402 (69%)
 Frame = +3

Query: 57   ALLHLCKSPRDLHQLHAFSIKSGLFLSPSVSARFLTLYSRPDLGTLSESLCLFSHLPRTD 236
            +LL   K+ ++  QLHA S+K+  F  PS+S+  L+LY+ P +  L   L +F+ +    
Sbjct: 13   SLLKTSKTDKETKQLHALSVKTNTFSHPSISSCLLSLYAEPKINNLEYVLSIFNKIQEPA 72

Query: 237  SFSFNTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPLIIKGCAQVDAVHEGRQIH 416
               +N LIK Y+ +  SH A+ LF  +L      PDGFT P +IKGCA++ A  EG+QIH
Sbjct: 73   LVLYNILIKCYIQNQLSHDAITLFSQLLH--EFNPDGFTLPCVIKGCARLHATKEGKQIH 130

Query: 417  ALVFKLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKDLVTRNSMIDGYVKSGEIE 596
             LV KLGF ++ FV  SLV+ YSKC D+ SA +VF  + DKDLV+ NS+IDGYVK G++E
Sbjct: 131  GLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCGQVE 190

Query: 597  IARRLFDEMPERDLFSWTSLVSGYSRCGKVEIAREVFDLMPEKSVVSWNAMVDGYMKNGK 776
            +  +LF+EMPERDLFSWT L+ G+S+CGKV++ARE+FD MP +++VSWNAM++GYMK G 
Sbjct: 191  LGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGD 250

Query: 777  VEAARELFDQMPEKNVVSWNSMITGYEKAGLFKEATEVYDEMLTEGVNPSFVTFXXXXXX 956
               A ELFD+MPEKN++SWNSM+ GY+    FKEA +++  ML     P+  T       
Sbjct: 251  FVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTPNHATLVSTFSA 310

Query: 957  XXXXXXXERGRLIHEHICRNGLSLNGVLGICLIEMYSKCGSIESAISLFEEISRKKLGHW 1136
                     G+ +H ++ +NG  L+GVL   LI MYSKCG+IESA+S+F+ I++KKLGHW
Sbjct: 311  VSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLITKKKLGHW 370

Query: 1137 TAMIVGLGLHGMADSAFKFFSKMVRIGMKPNAITFIGVLNAC 1262
            TA+IVGLG+HGMAD+A +FF +M R GM+P+AITFIGVLNAC
Sbjct: 371  TAIIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNAC 412


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449511814|ref|XP_004164061.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  409 bits (1051), Expect = e-112
 Identities = 198/400 (49%), Positives = 276/400 (69%)
 Frame = +3

Query: 63   LHLCKSPRDLHQLHAFSIKSGLFLSPSVSARFLTLYSRPDLGTLSESLCLFSHLPRTDSF 242
            L  C + R+ +QLHA SIK+     PSVS+R L LY+ P +  L  +  LF  +      
Sbjct: 22   LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81

Query: 243  SFNTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPLIIKGCAQVDAVHEGRQIHAL 422
            S+N LIK Y+ + +S+ A+ LF  +L      PD FT P ++KGCA++ A+ EG+QIH L
Sbjct: 82   SWNLLIKCYIENQRSNDAIALFCKLLC--DFVPDSFTLPCVLKGCARLGALQEGKQIHGL 139

Query: 423  VFKLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKDLVTRNSMIDGYVKSGEIEIA 602
            V K+GF +D FV  SLVS YSKCG++    +VFDR+ DKD+V+ NS+IDGY + GEIE+A
Sbjct: 140  VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199

Query: 603  RRLFDEMPERDLFSWTSLVSGYSRCGKVEIAREVFDLMPEKSVVSWNAMVDGYMKNGKVE 782
              +F+EMPE+D FSWT L+ G S+ GK+E AR+VFD MP ++ VSWNAM++GYMK G   
Sbjct: 200  LEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSN 259

Query: 783  AARELFDQMPEKNVVSWNSMITGYEKAGLFKEATEVYDEMLTEGVNPSFVTFXXXXXXXX 962
             A+ELFDQMPE+++V+WNSMITGYE+   F +A ++++ ML E ++P++ T         
Sbjct: 260  TAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAAS 319

Query: 963  XXXXXERGRLIHEHICRNGLSLNGVLGICLIEMYSKCGSIESAISLFEEISRKKLGHWTA 1142
                   GR +H +I ++G   +GVLG  LIEMYSKCGS++SA+ +F  I +KKLGHWT+
Sbjct: 320  GMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTS 379

Query: 1143 MIVGLGLHGMADSAFKFFSKMVRIGMKPNAITFIGVLNAC 1262
            +IVGLG+HG+ +   + F +M R G+KP+AITFIGVLNAC
Sbjct: 380  VIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 419


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  405 bits (1041), Expect = e-110
 Identities = 203/398 (51%), Positives = 274/398 (68%)
 Frame = +3

Query: 69   LCKSPRDLHQLHAFSIKSGLFLSPSVSARFLTLYSRPDLGTLSESLCLFSHLPRTDSFSF 248
            LC +P+++ QLHAFS+K+ +F  P VS+R L LYS P +  L  +  +F  + R     +
Sbjct: 23   LC-APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHW 81

Query: 249  NTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPLIIKGCAQVDAVHEGRQIHALVF 428
            NT+IK YV +  SH  + LF ++  +    PD FT P +IKGCA++  V EG+QIH L  
Sbjct: 82   NTIIKCYVENQFSHDGIVLFHEL--VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 139

Query: 429  KLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKDLVTRNSMIDGYVKSGEIEIARR 608
            K+GF  D FVQ SLV+ YSKCG++  A +VFD + DKD+V  NS+IDGY + GEI+IA +
Sbjct: 140  KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 609  LFDEMPERDLFSWTSLVSGYSRCGKVEIAREVFDLMPEKSVVSWNAMVDGYMKNGKVEAA 788
            LF+EMPERD FSWT LV G S+CGKVE AR++FD MP +++VSWNAM++GYMK+G  ++A
Sbjct: 200  LFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSA 259

Query: 789  RELFDQMPEKNVVSWNSMITGYEKAGLFKEATEVYDEMLTEGVNPSFVTFXXXXXXXXXX 968
             ELF QMP  ++V+WN MI GYE  G F +A +++  ML  G  PS  T           
Sbjct: 260  LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 319

Query: 969  XXXERGRLIHEHICRNGLSLNGVLGICLIEMYSKCGSIESAISLFEEISRKKLGHWTAMI 1148
                +GR IH ++ +NG  L+G+LG  LIEMY+KCG IESA+++F  I +KK+GHWTA+I
Sbjct: 320  AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 379

Query: 1149 VGLGLHGMADSAFKFFSKMVRIGMKPNAITFIGVLNAC 1262
            VGLG+HGMA+ A   F +M + G+KPNAI FIGVLNAC
Sbjct: 380  VGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNAC 417


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
            gi|449480068|ref|XP_004155790.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  302 bits (774), Expect = 1e-79
 Identities = 169/450 (37%), Positives = 258/450 (57%), Gaps = 47/450 (10%)
 Frame = +3

Query: 54   LALLHLCKSPRDLHQLHAFSIKSGLFLSPSVSARF-LTLYSRPDLGTLSESLCLF----- 215
            L LL  C++  D++Q+HA  IK+G   + S++ +  L   S P    +  +  +F     
Sbjct: 18   LLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYA 77

Query: 216  ------SHLPRTDSFSFNTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPLIIKGC 377
                  +HL   D F +N +IK Y   ++   AL LF  M+   G   D F+F LI+K C
Sbjct: 78   VQRIRRNHLD-DDPFLWNAVIKSYSHGNEPVRALVLFC-MMLENGFCVDKFSFSLILKAC 135

Query: 378  AQVDAVHEGRQIHALVFKLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKDLVTRN 557
            A+V  V EG+QIH L+ KL    + F+   L++ Y +CGD+  A QVFDR+  +D V+ N
Sbjct: 136  ARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYN 195

Query: 558  SMIDGYVKSGEIEIARRLFD----------------------------------EMPERD 635
            SMIDGYVKSG I++AR LFD                                  +MPERD
Sbjct: 196  SMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERD 255

Query: 636  LFSWTSLVSGYSRCGKVEIAREVFDLMPEKSVVSWNAMVDGYMKNGKVEAARELFDQMPE 815
            L SW +++ G+++CG++E A  +F+ MP++ V+SW+ M+DGY K G ++ AR LFD+MP+
Sbjct: 256  LVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPD 315

Query: 816  KNVVSWNSMITGYEKAGLFKEATEVYDEMLTE-GVNPSFVTFXXXXXXXXXXXXXERGRL 992
            K+VV++N+++ GY + G + EA E++ EM  +  ++P   T              E+   
Sbjct: 316  KDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAAS 375

Query: 993  IHEHICRNGLSLNGVLGICLIEMYSKCGSIESAISLFEEISRKKLGHWTAMIVGLGLHGM 1172
            +H +   NG+S+ G + + LI+MYSKCGSIE+AI +F+ + +K + HW AMI G+  +G+
Sbjct: 376  MHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGL 435

Query: 1173 ADSAFKFFSKMVRIGMKPNAITFIGVLNAC 1262
               AF    +M R+ +KP+ ITFIGVLNAC
Sbjct: 436  GKLAFGMLLEMHRLSVKPDGITFIGVLNAC 465



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
 Frame = +3

Query: 183 LGTLSESLCLFSHLPRTDSFSFNTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPL 362
           LG +  +  LF  +P  D  +FNT++  Y  +     AL +F +M      +PD  T  +
Sbjct: 300 LGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVV 359

Query: 363 IIKGCAQVDAVHEGRQIHALVFKLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKD 542
            +   +Q+  V +   +H    + G ++ G V  +L+  YSKCG + +A  +FD +  K 
Sbjct: 360 ALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKG 419

Query: 543 LVTRNSMIDGYVKSGEIEIARRLFDEMP----ERDLFSWTSLVSGYSRCGKVEIAREVFD 710
           +   N+MI G  ++G  ++A  +  EM     + D  ++  +++  +  G V+     F+
Sbjct: 420 IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFE 479

Query: 711 LMP-----EKSVVSWNAMVDGYMKNGKVEAARELFDQMP-EKNVVSWNSMIT 848
           LM      E  +  +  MVD   K G VE A +  ++MP E N + W ++++
Sbjct: 480 LMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLS 531


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Vitis vinifera]
          Length = 719

 Score =  293 bits (749), Expect = 8e-77
 Identities = 156/399 (39%), Positives = 240/399 (60%), Gaps = 2/399 (0%)
 Frame = +3

Query: 72   CKSPRDLHQLHAFSIKSGLFLSPSVSARFL-TLYSRPDLGTLSESLCLFSHLPRTDSFSF 248
            C S ++ +Q+H   I SGL   P  + R + TL S PD  ++  ++ LF  L   D+F  
Sbjct: 69   CGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPD--SVQHAVSLFEGLEEPDAFIC 126

Query: 249  NTLIKRYVADHQSHLALCLFRDMLFIPGATPDGFTFPLIIKGCAQVDAVHEGRQIHALVF 428
            NT+++ YV  +  + AL  + + +      P+ +TFPL++K C ++ ++ +G +IHA + 
Sbjct: 127  NTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARIL 186

Query: 429  KLGFAIDGFVQCSLVSFYSKCGDMWSAHQVFDRIRDKDLVTRNSMIDGYVKSGEIEIARR 608
            K GF +D FV+ SL+  YS CG +  A  +F+     DLVT NSMIDGYVK+GEI  AR 
Sbjct: 187  KFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARE 246

Query: 609  LFDEMPERDLFSWTSLVSGYSRCGKVEIAREVFDLMPEKSVVSWNAMVDGYMKNGKVEAA 788
            LF+EMPERDLFSW S+++GY   G +  A ++F+ MP + +VSWN M+DGY +   +E A
Sbjct: 247  LFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIA 306

Query: 789  RELFDQMPEKNVVSWNSMITGYEKAGLFKEATEVYDEMLTEGVNPSFVTFXXXXXXXXXX 968
             ELF+ MP +NVVSWN M+  Y +   + E   ++D+M+ E + P+  T           
Sbjct: 307  CELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHL 365

Query: 969  XXXERGRLIHEHICRNG-LSLNGVLGICLIEMYSKCGSIESAISLFEEISRKKLGHWTAM 1145
               +RG+ IH +I  N  +  + +L   L+ MY+KCG+++ A  +F+++S + +  W +M
Sbjct: 366  GRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSM 425

Query: 1146 IVGLGLHGMADSAFKFFSKMVRIGMKPNAITFIGVLNAC 1262
            I+G G+HG AD A + F  M + G  PN  TFI VL+AC
Sbjct: 426  IMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSAC 464