BLASTX nr result

ID: Dioscorea21_contig00009880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009880
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526839.1| protein with unknown function [Ricinus commu...    72   5e-11
ref|XP_002327333.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003548948.1| PREDICTED: leucine-rich repeat receptor-like...    69   5e-10
ref|XP_002891102.1| leucine-rich repeat family protein [Arabidop...    69   5e-10
ref|XP_003548947.1| PREDICTED: probable leucine-rich repeat rece...    67   2e-09

>ref|XP_002526839.1| protein with unknown function [Ricinus communis]
           gi|223533843|gb|EEF35574.1| protein with unknown
           function [Ricinus communis]
          Length = 954

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/91 (43%), Positives = 55/91 (60%)
 Frame = -2

Query: 274 ISNLTKIAFLNLNDNKLEGQIPDSIGNIGVSLIELQLANNKFNGSIPQMSRDLQMXXXXX 95
           ISNL  +A LNL  NKL G +PD+I ++  SL+ELQL  N+  G IP M   LQ+     
Sbjct: 454 ISNLQDLAHLNLQGNKLNGSLPDNINSMS-SLLELQLGENQLGGRIPMMPTKLQI-ALNL 511

Query: 94  XXXXXTGPLPESFALPHNLEVLDLSDNSFTG 2
                 GP+P + +   +LE+LDLS+N F+G
Sbjct: 512 SSNLFQGPIPNTLSQLKDLEILDLSNNKFSG 542


>ref|XP_002327333.1| predicted protein [Populus trichocarpa] gi|222835703|gb|EEE74138.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/91 (45%), Positives = 58/91 (63%)
 Frame = -2

Query: 274 ISNLTKIAFLNLNDNKLEGQIPDSIGNIGVSLIELQLANNKFNGSIPQMSRDLQMXXXXX 95
           ISNL  +A LNL  NKL+G IP ++ ++  SL+ELQL  N+ NG+IP M   LQ+     
Sbjct: 448 ISNLQSLAHLNLQCNKLQGPIPATVNSMN-SLLELQLGQNQLNGTIPLMPVKLQI-SLNL 505

Query: 94  XXXXXTGPLPESFALPHNLEVLDLSDNSFTG 2
                 GP+P + +   +LEVLDLS+N+F+G
Sbjct: 506 SSNLFQGPIPGTLSRLKDLEVLDLSNNNFSG 536


>ref|XP_003548948.1| PREDICTED: leucine-rich repeat receptor-like tyrosine-protein
           kinase At2g41820-like [Glycine max]
          Length = 950

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/91 (45%), Positives = 54/91 (59%)
 Frame = -2

Query: 274 ISNLTKIAFLNLNDNKLEGQIPDSIGNIGVSLIELQLANNKFNGSIPQMSRDLQMXXXXX 95
           I+NL+ + FLN+  N L G IP SI N+ + LIELQL  N+ +G IP M R LQ      
Sbjct: 448 ITNLSNLNFLNMQSNNLSGSIPTSIENLKL-LIELQLGENQLSGVIPIMPRSLQ-ASLNL 505

Query: 94  XXXXXTGPLPESFALPHNLEVLDLSDNSFTG 2
                +G +P SF +   LEVLDLS+N  +G
Sbjct: 506 SSNHLSGNIPSSFDILDGLEVLDLSNNKLSG 536


>ref|XP_002891102.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336944|gb|EFH67361.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 959

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/91 (43%), Positives = 54/91 (59%)
 Frame = -2

Query: 274 ISNLTKIAFLNLNDNKLEGQIPDSIGNIGVSLIELQLANNKFNGSIPQMSRDLQMXXXXX 95
           +SNLT+++ +NL  N L G IPD+I N+   LIELQL  N+  G IP M R LQ+     
Sbjct: 453 LSNLTRLSSMNLQGNNLSGTIPDNIRNL-EDLIELQLGQNQLRGRIPVMPRKLQI-SLNL 510

Query: 94  XXXXXTGPLPESFALPHNLEVLDLSDNSFTG 2
                 G +P + +    LEVLDLS+N F+G
Sbjct: 511 SYNLFEGSIPTTLSELDRLEVLDLSNNKFSG 541


>ref|XP_003548947.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At5g63930-like [Glycine max]
          Length = 897

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/91 (45%), Positives = 52/91 (57%)
 Frame = -2

Query: 274 ISNLTKIAFLNLNDNKLEGQIPDSIGNIGVSLIELQLANNKFNGSIPQMSRDLQMXXXXX 95
           I+NL+ + FLNL  N L G IP SI N+   LIELQL  N+ +G IP M  +LQ      
Sbjct: 413 ITNLSSLNFLNLQSNNLSGSIPTSIENLKF-LIELQLGENQLSGVIPSMPWNLQASLNLS 471

Query: 94  XXXXXTGPLPESFALPHNLEVLDLSDNSFTG 2
                 G +P SF    +LEVLDLS+N  +G
Sbjct: 472 SNHLS-GNIPSSFGTLGSLEVLDLSNNKLSG 501


Top