BLASTX nr result

ID: Dioscorea21_contig00009857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009857
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19953.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS...    64   1e-08
ref|XP_002520244.1| Transcriptional corepressor SEUSS, putative ...    62   4e-08
emb|CAF18251.1| SEU3B protein [Antirrhinum majus]                      59   5e-07
ref|XP_002441941.1| hypothetical protein SORBIDRAFT_08g005250 [S...    58   9e-07

>emb|CBI19953.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 44/54 (81%)
 Frame = +3

Query: 15  AMTVNGRIGMNQISQDPSAMNHQQMEVSNRLLGGLGSVNSFNNLNIQYDWKTSP 176
           ++T+NGR+GM  +++D S +NHQQ ++ N+LLGGLG+VN FNNL  Q+DWK SP
Sbjct: 475 SLTINGRVGMTPMTRDQS-INHQQ-DLGNQLLGGLGAVNGFNNL--QFDWKQSP 524


>ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]
          Length = 913

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 44/54 (81%)
 Frame = +3

Query: 15   AMTVNGRIGMNQISQDPSAMNHQQMEVSNRLLGGLGSVNSFNNLNIQYDWKTSP 176
            ++T+NGR+GM  +++D S +NHQQ ++ N+LLGGLG+VN FNNL  Q+DWK SP
Sbjct: 864  SLTINGRVGMTPMTRDQS-INHQQ-DLGNQLLGGLGAVNGFNNL--QFDWKQSP 913


>ref|XP_002520244.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]
            gi|223540463|gb|EEF42030.1| Transcriptional corepressor
            SEUSS, putative [Ricinus communis]
          Length = 905

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +3

Query: 24   VNGRIGMNQISQDPSAMNHQQMEVSNRLLGGLGSVNSFNNLNIQYDWKTSP 176
            +NGR+GM  + ++PS MNHQQ ++ N+LL GLG+VN FNNL   +DWK SP
Sbjct: 858  LNGRVGMQSMVREPS-MNHQQQDLGNQLLSGLGAVNGFNNL--PFDWKPSP 905


>emb|CAF18251.1| SEU3B protein [Antirrhinum majus]
          Length = 297

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 6   NAAAMTVNGRIGMNQISQDPSAMNHQQME-VSNRLLGGLGSVNSFNNLNIQYDWKTSP 176
           N  ++++NGR+GM    +    MNHQQ + + N+LL GLG+VN FNNL  Q+DWKTSP
Sbjct: 244 NNNSLSMNGRVGMAMAREQ--TMNHQQQQDMGNQLLSGLGAVNGFNNL--QFDWKTSP 297


>ref|XP_002441941.1| hypothetical protein SORBIDRAFT_08g005250 [Sorghum bicolor]
            gi|241942634|gb|EES15779.1| hypothetical protein
            SORBIDRAFT_08g005250 [Sorghum bicolor]
          Length = 918

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
 Frame = +3

Query: 15   AMTVNGRIGMNQISQDPSAMNHQQME--VSNRLLGGLGSVNSFNNLNIQYDWKTS 173
            A+ +NGR GMN  + D + ++HQQ +  + N+LLGGL + NSFNNL  QYDWK++
Sbjct: 865  ALAMNGRTGMNHSAHDLTQLSHQQQQRDLGNQLLGGLRAANSFNNL--QYDWKSA 917


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