BLASTX nr result

ID: Dioscorea21_contig00009849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009849
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563542.1| PREDICTED: F-box protein SKIP31-like [Brachy...   138   4e-31
dbj|BAD53635.1| F-box family protein-like [Oryza sativa Japonica...   130   8e-29
gb|AFW69432.1| hypothetical protein ZEAMMB73_586820 [Zea mays]        130   8e-29
ref|NP_001058540.2| Os06g0709100 [Oryza sativa Japonica Group] g...   130   8e-29
ref|NP_001150637.1| LOC100284270 [Zea mays] gi|195640774|gb|ACG3...   130   8e-29

>ref|XP_003563542.1| PREDICTED: F-box protein SKIP31-like [Brachypodium distachyon]
          Length = 384

 Score =  138 bits (348), Expect = 4e-31
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = +3

Query: 3   FLCDKTGRVHVCDDTCREIVLDQASGLLVCTISGHCFDRWLSPEEESSTSDGEQQQAGVT 182
           ++C+KTGRVHVCDD CRE VLDQ+SGLLVCTISGHCF+R+L P++E  T D +QQQ GVT
Sbjct: 290 YICEKTGRVHVCDDACREFVLDQSSGLLVCTISGHCFERFLCPDDEWDTCDTDQQQGGVT 349

Query: 183 DEAEPFLGSGRFARAYLLG 239
           DEAEPFLGSGRFARAYLLG
Sbjct: 350 DEAEPFLGSGRFARAYLLG 368


>dbj|BAD53635.1| F-box family protein-like [Oryza sativa Japonica Group]
           gi|125598464|gb|EAZ38244.1| hypothetical protein
           OsJ_22620 [Oryza sativa Japonica Group]
           gi|215765392|dbj|BAG87089.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 375

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/80 (72%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   FLCDKTGRVHVCDDTCREIVLDQASGLLVCTISGHCFDRWLSPEEE-SSTSDGEQQQAGV 179
           ++C+KTGRVHVCDD CRE VLDQ+SGLL+CTISGHCF+RWL P++E  +  D + QQAG+
Sbjct: 280 YICEKTGRVHVCDDACREFVLDQSSGLLLCTISGHCFERWLCPDDEWDADDDTDLQQAGM 339

Query: 180 TDEAEPFLGSGRFARAYLLG 239
           TDEAEPF+GSGRFARAY LG
Sbjct: 340 TDEAEPFMGSGRFARAYQLG 359


>gb|AFW69432.1| hypothetical protein ZEAMMB73_586820 [Zea mays]
          Length = 373

 Score =  130 bits (328), Expect = 8e-29
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = +3

Query: 3   FLCDKTGRVHVCDDTCREIVLDQASGLLVCTISGHCFDRWLSPEEESSTSDGEQQQAGVT 182
           ++C+KTGRVHVCDD CRE VLDQ+SGLL+CTISGHCF+RWL P++E    D + QQAGV 
Sbjct: 279 YICEKTGRVHVCDDACREFVLDQSSGLLLCTISGHCFERWLCPDDEWDADDTDLQQAGVV 338

Query: 183 DEAEPFLGSGRFARAYLLG 239
           DEAEPF+GSGR+ARA +LG
Sbjct: 339 DEAEPFMGSGRYARAIMLG 357


>ref|NP_001058540.2| Os06g0709100 [Oryza sativa Japonica Group]
           gi|255677386|dbj|BAF20454.2| Os06g0709100, partial
           [Oryza sativa Japonica Group]
          Length = 357

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/80 (72%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   FLCDKTGRVHVCDDTCREIVLDQASGLLVCTISGHCFDRWLSPEEE-SSTSDGEQQQAGV 179
           ++C+KTGRVHVCDD CRE VLDQ+SGLL+CTISGHCF+RWL P++E  +  D + QQAG+
Sbjct: 262 YICEKTGRVHVCDDACREFVLDQSSGLLLCTISGHCFERWLCPDDEWDADDDTDLQQAGM 321

Query: 180 TDEAEPFLGSGRFARAYLLG 239
           TDEAEPF+GSGRFARAY LG
Sbjct: 322 TDEAEPFMGSGRFARAYQLG 341


>ref|NP_001150637.1| LOC100284270 [Zea mays] gi|195640774|gb|ACG39855.1| F-box domain
           containing protein [Zea mays]
           gi|224032795|gb|ACN35473.1| unknown [Zea mays]
           gi|413934880|gb|AFW69431.1| F-box domain containing
           protein [Zea mays]
          Length = 375

 Score =  130 bits (328), Expect = 8e-29
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = +3

Query: 3   FLCDKTGRVHVCDDTCREIVLDQASGLLVCTISGHCFDRWLSPEEESSTSDGEQQQAGVT 182
           ++C+KTGRVHVCDD CRE VLDQ+SGLL+CTISGHCF+RWL P++E    D + QQAGV 
Sbjct: 281 YICEKTGRVHVCDDACREFVLDQSSGLLLCTISGHCFERWLCPDDEWDADDTDLQQAGVV 340

Query: 183 DEAEPFLGSGRFARAYLLG 239
           DEAEPF+GSGR+ARA +LG
Sbjct: 341 DEAEPFMGSGRYARAIMLG 359


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