BLASTX nr result

ID: Dioscorea21_contig00009840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009840
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW74055.1| hypothetical protein ZEAMMB73_857730 [Zea mays]        129   2e-28
gb|ACN31704.1| unknown [Zea mays] gi|413939505|gb|AFW74056.1| th...   129   2e-28
gb|ACG34954.1| thioredoxin-like 8 [Zea mays]                          128   6e-28
ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplast...   127   1e-27
ref|XP_002453049.1| hypothetical protein SORBIDRAFT_04g037400 [S...   125   5e-27

>gb|AFW74055.1| hypothetical protein ZEAMMB73_857730 [Zea mays]
          Length = 180

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 PRAAVIAATAWRNVEDDFSTESVVDDDAPISIELVPVSGEQEFDRIIAEEK----PVIFL 162
           PR A  AA+A R    +       +++ P+S+EL P++ EQ+ D ++ E +    P++ L
Sbjct: 55  PRRAAPAASAARERVTE-------EEERPVSVELEPIASEQQLDWVLGEARQLQLPIVLL 107

Query: 161 WMANWCRKCIYLKPKLEKLAADYHPRIRFYGIDVNTVPQRLVNRAEITKMPTI 3
           WMA+WCRKCIYLKPKLEKLAA+YHPRIRFY IDVN VPQ+LVNRA +TKMP I
Sbjct: 108 WMASWCRKCIYLKPKLEKLAAEYHPRIRFYCIDVNCVPQKLVNRAGVTKMPCI 160


>gb|ACN31704.1| unknown [Zea mays] gi|413939505|gb|AFW74056.1| thioredoxin-like 8
           [Zea mays]
          Length = 194

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 PRAAVIAATAWRNVEDDFSTESVVDDDAPISIELVPVSGEQEFDRIIAEEK----PVIFL 162
           PR A  AA+A R    +       +++ P+S+EL P++ EQ+ D ++ E +    P++ L
Sbjct: 55  PRRAAPAASAARERVTE-------EEERPVSVELEPIASEQQLDWVLGEARQLQLPIVLL 107

Query: 161 WMANWCRKCIYLKPKLEKLAADYHPRIRFYGIDVNTVPQRLVNRAEITKMPTI 3
           WMA+WCRKCIYLKPKLEKLAA+YHPRIRFY IDVN VPQ+LVNRA +TKMP I
Sbjct: 108 WMASWCRKCIYLKPKLEKLAAEYHPRIRFYCIDVNCVPQKLVNRAGVTKMPCI 160


>gb|ACG34954.1| thioredoxin-like 8 [Zea mays]
          Length = 193

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 PRAAVIAATAWRNVEDDFSTESVVDDDAPISIELVPVSGEQEFDRIIAEEK----PVIFL 162
           PR A  AA+A R            +++ P+S++L P++ EQ+ D ++ E +    P++ L
Sbjct: 55  PRRAAPAASAARE-------RVAEEEERPVSVDLEPIASEQQLDWVLGEAQQLQLPIVLL 107

Query: 161 WMANWCRKCIYLKPKLEKLAADYHPRIRFYGIDVNTVPQRLVNRAEITKMPTI 3
           WMA+WCRKCIYLKPKLEKLAA+YHPRIRFY IDVN VPQ+LVNRA +TKMP I
Sbjct: 108 WMASWCRKCIYLKPKLEKLAAEYHPRIRFYCIDVNCVPQKLVNRAGVTKMPCI 160


>ref|XP_002273467.2| PREDICTED: thioredoxin-like 3-2, chloroplastic-like [Vitis
           vinifera] gi|296085989|emb|CBI31430.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/88 (64%), Positives = 72/88 (81%), Gaps = 4/88 (4%)
 Frame = -3

Query: 254 DDAPISIELVPVSGEQEFDRIIAE----EKPVIFLWMANWCRKCIYLKPKLEKLAADYHP 87
           DD+P+S+EL P+S + +FDRI+ E    E+ V  +WMA WCRKCIYLKPKLEKLAA+Y+P
Sbjct: 73  DDSPVSVELKPISSDTQFDRILGEAQQLEESVAIVWMATWCRKCIYLKPKLEKLAAEYYP 132

Query: 86  RIRFYGIDVNTVPQRLVNRAEITKMPTI 3
           R+RFY +DVNTVP +LV RA +TKMPTI
Sbjct: 133 RLRFYCVDVNTVPHKLVARAAVTKMPTI 160


>ref|XP_002453049.1| hypothetical protein SORBIDRAFT_04g037400 [Sorghum bicolor]
           gi|241932880|gb|EES06025.1| hypothetical protein
           SORBIDRAFT_04g037400 [Sorghum bicolor]
          Length = 188

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/108 (55%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
 Frame = -3

Query: 329 PRAAVIAATAWRNVEDDFSTESVVDDDAPISIELVPVSGEQEFDRIIAEEK----PVIFL 162
           PR A  AA A R        E V  ++ P+ +EL P++ EQ+ DR++A+ +    P++ L
Sbjct: 57  PRRAAPAAAAAR--------ERVAGEEGPVWVELEPITSEQQLDRVLADAQQLDIPIVLL 108

Query: 161 WMANWCRKCIYLKPKLEKLAADYHPRIRFYGIDVNTVPQRLVNRAEIT 18
           WMA+WCRKCIYLKPKLEKLAA+YHPR+RFY IDVN VPQ+LVNRA +T
Sbjct: 109 WMASWCRKCIYLKPKLEKLAAEYHPRVRFYCIDVNCVPQKLVNRAGVT 156


Top