BLASTX nr result

ID: Dioscorea21_contig00009835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00009835
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    86   5e-20
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    84   1e-19
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              74   9e-19
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          72   3e-18
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...    72   3e-18

>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 85.9 bits (211), Expect(2) = 5e-20
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = -1

Query: 311  TDESPPRKTRSLEDIYNSCTFALFADDPADFKVAVKHKEWVQAMDAEIASIEKNNTWELC 132
            ++E+PPRK RSL DIY + T  LF  DP  F+ AV+ +EW  AM  EIA+IEKN TWEL 
Sbjct: 893  SEETPPRKFRSLRDIYET-TQVLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELV 951

Query: 131  VLPQGKHAVGLKWI 90
             LP+ K+ +G+KW+
Sbjct: 952  ELPEDKNVIGVKWV 965



 Score = 36.6 bits (83), Expect(2) = 5e-20
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -3

Query: 90   FKSKLNALGEVVKLKARLVAKGYSQRLGVD 1
            F++K  A G + K KARLVAKGY+Q+ GVD
Sbjct: 966  FRTKYLADGSIQKHKARLVAKGYAQQHGVD 995


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 84.3 bits (207), Expect(2) = 1e-19
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -1

Query: 311  TDESPPRKTRSLEDIYNSCTFALFADDPADFKVAVKHKEWVQAMDAEIASIEKNNTWELC 132
            ++E+PPRK RSL DIY + T  LF  DP  F+ AV+ +EW  AM  EI +IEKN TWEL 
Sbjct: 782  SEETPPRKFRSLRDIYET-TQVLFVADPTTFEEAVEKEEWCSAMKEEIVAIEKNETWELV 840

Query: 131  VLPQGKHAVGLKWI 90
             LP+ K+ +G+KW+
Sbjct: 841  ELPEDKNVIGVKWV 854



 Score = 36.6 bits (83), Expect(2) = 1e-19
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -3

Query: 90  FKSKLNALGEVVKLKARLVAKGYSQRLGVD 1
           F++K  A G + K KARLVAKGY+Q+ GVD
Sbjct: 855 FRTKYLADGSIQKHKARLVAKGYAQQHGVD 884


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 73.9 bits (180), Expect(2) = 9e-19
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
 Frame = -1

Query: 344  STRVECLQDAVTDESPPRKT---RSLEDIY-------NSCTFALFAD-DPADFKVAVKHK 198
            +TR   L  +  +ES   +T   RS++++Y       N   F LFA+ +P DF+ A++ K
Sbjct: 728  TTRPTSLTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKK 787

Query: 197  EWVQAMDAEIASIEKNNTWELCVLPQGKHAVGLKWI 90
             W  AMD EI SI+KN+TWEL  LP G  A+G+KW+
Sbjct: 788  TWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 823



 Score = 44.3 bits (103), Expect(2) = 9e-19
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -3

Query: 90  FKSKLNALGEVVKLKARLVAKGYSQRLGVD 1
           +K+K N+ GEV + KARLVAKGYSQR G+D
Sbjct: 824 YKAKKNSKGEVERYKARLVAKGYSQRAGID 853


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 71.6 bits (174), Expect(2) = 3e-18
 Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 8/101 (7%)
 Frame = -1

Query: 368  EEVLPGGSSTRVECLQDAVTDESPPRKTRSLEDIY-------NSCTFALFAD-DPADFKV 213
            E   P  S T  + ++++ ++ +P  + RS++++Y       N   F LFA+ +P DF+ 
Sbjct: 787  EPTTPPTSPTSSQ-IEESSSERTP--RFRSIQELYEVTENQENLTLFCLFAECEPMDFQK 843

Query: 212  AVKHKEWVQAMDAEIASIEKNNTWELCVLPQGKHAVGLKWI 90
            A++ K W  AMD EI SI+KN+TWEL  LP G  A+G+KW+
Sbjct: 844  AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 884



 Score = 45.1 bits (105), Expect(2) = 3e-18
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -3

Query: 90  FKSKLNALGEVVKLKARLVAKGYSQRLGVD 1
           +K+K N+ GEV + KARLVAKGYSQR+G+D
Sbjct: 885 YKAKKNSKGEVERYKARLVAKGYSQRVGID 914


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score = 71.6 bits (174), Expect(2) = 3e-18
 Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 8/101 (7%)
 Frame = -1

Query: 368  EEVLPGGSSTRVECLQDAVTDESPPRKTRSLEDIY-------NSCTFALFAD-DPADFKV 213
            E   P  S T  + ++++ ++ +P  + RS++++Y       N   F LFA+ +P DF+ 
Sbjct: 787  EPTTPPTSPTSSQ-IEESSSERTP--RFRSIQELYEVTENQENLTLFCLFAECEPMDFQK 843

Query: 212  AVKHKEWVQAMDAEIASIEKNNTWELCVLPQGKHAVGLKWI 90
            A++ K W  AMD EI SI+KN+TWEL  LP G  A+G+KW+
Sbjct: 844  AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 884



 Score = 45.1 bits (105), Expect(2) = 3e-18
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -3

Query: 90  FKSKLNALGEVVKLKARLVAKGYSQRLGVD 1
           +K+K N+ GEV + KARLVAKGYSQR+G+D
Sbjct: 885 YKAKKNSKGEVERYKARLVAKGYSQRVGID 914


Top